Activity
From 02/09/2013 to 03/10/2013
03/09/2013
- 09:32 AM Bug #5889: Update documentation and installers to require Java 7
- Actually, I decided to downgrade OpenSAML to the stable released version of 2.5.1 which does not require Java 7. The ...
03/08/2013
- 04:01 PM Bug #5889 (Resolved): Update documentation and installers to require Java 7
- ECP is using OpenSAML 3.0 that is now requiring Java 7.
- 11:13 AM Bug #5888 (Resolved): Couldn't log in as a NCEAS account in Morpho
- When I tried to log in the DataONE network as a NCEAS account, i got this error:
[java] Could not authenticate: org...
03/07/2013
- 03:48 PM Bug #5887 (New): Handle the query result set which contains the revision chains of documents
- Morpho network query now experiences a performance issue because the merge of the network and local search results.
...
03/05/2013
- 03:07 PM Bug #5860: When morpho saves a network data package to local, the system metadata may contain id (obsoletes) which doesn't exist
- Add the code to set the obsoletes element in the system metadata and the revision manager even though the obsoleted i...
03/04/2013
- 05:10 PM Bug #5860: When morpho saves a network data package to local, the system metadata may contain id (obsoletes) which doesn't exist
- Jing and I talked about a related issue today and decided that we CAN leave the <obsoletes> values in local system me...
- 05:06 PM Bug #5799: publish using DOI feature
- Decided to include this in 2.0.0 release since the site review deadline has already passed.
- 05:04 PM Bug #5886 (Resolved): Rework AccessPolicy and ReplicationPolicy editing
- 1. Move "Edit XXX Policy..." from the Documentation menu into File menu.
2. Add "Inherit from package" checkbox to t...
02/27/2013
- 11:54 AM Bug #5885: Upgrading EML version causes access policy to be lost
- Looks good - thanks, Jing!
- 09:45 AM Bug #5885: Upgrading EML version causes access policy to be lost
- Before the upgrading, the system metadata should be preserved. Then we set it backup when the upgrading is done.
Af... - 09:31 AM Bug #5885: Upgrading EML version causes access policy to be lost
- If i didn't upgrade the eml version and saved it locally, the access policies can be preserved in the system metadata...
- 09:19 AM Bug #5885: Upgrading EML version causes access policy to be lost
- Here is an example EML 2.0.1 file that has an accessPolicy set in SystemMetadata. When I open it by id in Morpho (aft...
- 08:58 AM Bug #5885: Upgrading EML version causes access policy to be lost
- My hunch is that the original SystemMetadata (from the MN) is discarded during the upgrade process and new SystemMeta...
02/26/2013
- 10:21 PM Bug #5885 (Resolved): Upgrading EML version causes access policy to be lost
- Matt saved a DataONE package to the MN using R, but the EML was 2.0.1 and had no access rules in it. The SystemMetada...
02/25/2013
- 03:58 PM Bug #5881: How can we change the access policy for the resource map document
- Now saving the ORE systemMetadata changes locally when setting access policy and replication policy.
- 02:55 PM Bug #5881: How can we change the access policy for the resource map document
- I hadn't written code to do that since I thought no one would ever see it, but if we save a local package to the netw...
- 02:49 PM Bug #5881: How can we change the access policy for the resource map document
- I just tested to change a local data package's access policy. The resource map file still keeps the same. In other wo...
- 02:08 PM Bug #5869: Test morpho 2.0 on windows
- I think we can close the bug.
02/22/2013
- 11:50 PM Bug #5876: Modify the Access Page for users easily inputting a DN
- Looks good, Jing. I added the internationalization string for the checkbox.
- 11:49 PM Bug #5882: Get a system metadata version number error when morpho tried to change the access policy of a network document
- Until we have a better solution, I have changed the code to always look up the latest serialVersion from the CN befor...
- 09:26 PM Bug #5882: Get a system metadata version number error when morpho tried to change the access policy of a network document
- If you reopen the package, you should get the updated SystemMetadata (serial version 1) and be able to update the acc...
- 05:10 PM Bug #5882 (Resolved): Get a system metadata version number error when morpho tried to change the access policy of a network document
- When I tried to change the access rule of a network document, i got this error:
The requested system metadata vers... - 11:46 PM Bug #5881: How can we change the access policy for the resource map document
- Now setting the ORE permissions when setting EML permissions on the CN. Using the naming convention where "resourceMa...
- 04:59 PM Bug #5881: How can we change the access policy for the resource map document
- Making it match the EML document is the best course for now I think. It will be confusing to have a separate approac...
- 04:56 PM Bug #5881 (Resolved): How can we change the access policy for the resource map document
- When we create a data package with a data object by the new data package wizard and entity wizard, a resource map doc...
- 03:54 PM Bug #5878: Test morpho 2.0 on linux
- Built installer on linux. Ran installer. launched Morpho using "./morpho" script. Logged in. Saved package. Updated p...
- 07:52 AM Bug #5878 (Resolved): Test morpho 2.0 on linux
- Especially the installer, the startup script and the menu rendering.
- 03:19 PM Bug #5879: Merge ECP IdP list from CILogon with local configuration
- Now merging the two lists. to actually release morpho we should comment out the test IdP entries in config.xml
- 08:02 AM Bug #5879 (Resolved): Merge ECP IdP list from CILogon with local configuration
- CILogon keeps a simple list of ECP-enabled IdPs that we can read from to get new members that support that protocol. ...
- 07:49 AM Bug #5877: Updating the access rule cause the data package being modified
- If the data package you opened had an existing <access> block, we remove it from the EML when setting the access poli...
02/21/2013
- 11:31 PM Bug #5877 (Resolved): Updating the access rule cause the data package being modified
- I opened a local data package and use the menu Document|Access Information to add an access rule for it. However, the...
- 11:02 PM Bug #5805: Local and Network revisions show at same time in search results
- Now only filtering if there are network results to filter. This is an improvement, but still means we check if the ne...
- 03:36 PM Bug #5805: Local and Network revisions show at same time in search results
- Jing's idea is to process the network search results to see if the local hits are in the older versions of the networ...
- 05:44 PM Bug #5873: Change [invisible] Login button to hyperlink button
- Instead, we just needed to make the button non-transparent.
- 03:38 PM Bug #5873 (Resolved): Change [invisible] Login button to hyperlink button
- In Windows (7) the "Login" button only shows the text and no border or button-looking outline. Since we use a hyperli...
- 04:26 PM Bug #5876 (Resolved): Modify the Access Page for users easily inputting a DN
- In today's meeting, Chris mentioned how a user inputted a DN rather than chose one from the tree. I took a look and f...
- 02:06 PM Bug #5869: Test morpho 2.0 on windows
- After updated the d1_common, i tested morpho against Metacat MN and GMN. It worked well to me.
- 01:28 PM Bug #5869: Test morpho 2.0 on windows
- Updated d1_common_java (will be in 1.2-SNAPSHOT) to let the OS decide which temp directory to use. Let's give that a ...
- 11:05 AM Bug #5869: Test morpho 2.0 on windows
- i am sending an email to him.
- 11:03 AM Bug #5869: Test morpho 2.0 on windows
- There's no reason to specify a temp directory - we can let the OS decide where to put them. Will talk with Rob about ...
- 10:49 AM Bug #5869: Test morpho 2.0 on windows
- The issue is in the d1_common_java module.
The method generateTempFile() in the SimpleMultipartEntity creates a temp... - 09:49 AM Bug #5869: Test morpho 2.0 on windows
- After updated the ECP lib, now I can log in. However, when i saved a data package to the network, I got this error:
... - 07:51 AM Bug #5872: Irregularities with access control
- EMG,
In Metacat 2.x, support for "denyFirst" access control rules was removed so that we more closely match the DataO... - 06:17 AM Bug #5872 (New): Irregularities with access control
- Dear Metacat and Morpho developers,
I am using metacat 2.0.3 and morpho 1.10.0. There seems to be a problem with s...
02/20/2013
- 11:44 PM Bug #5869: Test morpho 2.0 on windows
- I converted the CSR generation in the ECP client code to use Bouncy Castle rather than the classes that were removed ...
- 05:33 PM Bug #5823: Improve save-to-network performance
- I did a test to save the almost same data packages (an eml document to describe the same data file) into the network ...
02/19/2013
- 06:09 PM Bug #5869: Test morpho 2.0 on windows
- benMac, would you please run Morpho from the trunk? Today i just fixed a bug about the upgrading the upgraded profile...
- 05:34 PM Bug #5869: Test morpho 2.0 on windows
- But then when I relaunch Morpho it fails with these messages (I see some progress bars briefly so perhaps this versio...
- 05:25 PM Bug #5869: Test morpho 2.0 on windows
- Creating a new profile using RC-1 in Win 7, I got this warning message:
"C:\Users\Visitor\.morpho\profiles\brl\data\.... - 03:41 PM Bug #5869: Test morpho 2.0 on windows
- I tested the morpho from the trunk on a Windows 7 VM in my linux box. The issue i saw is that i can't log in. But i c...
- 03:56 PM Bug #5871: The revision manager contains the data files from different profile after upgrading morpho 1.x to 2.0
- In the RevisionUpdater class, there is structure to keep the revisions. We didn't reset it after upgrading a profile....
- 01:26 PM Bug #5871 (Resolved): The revision manager contains the data files from different profile after upgrading morpho 1.x to 2.0
- A Revision Manager in Morpho 2.0 manages the data objects in a single profile. So every profile has a Revision Manage...
- 01:28 PM Bug #5870: Make sure that a newly generated profile doesn't need upgrade
- When morpho generates a new profile, it will set the id-file map to be true. So morpho will not upgrade the new profi...
02/18/2013
- 10:48 PM Bug #5870 (Resolved): Make sure that a newly generated profile doesn't need upgrade
- Today, i created a new profile in morpho 2.0.0. I closed morpho and restart again. I saw an upgrade sign during the s...
- 05:24 PM Bug #5869: Test morpho 2.0 on windows
- For the CCIT meeting I built RC1 installers and made them available here:
http://bespin.nceas.ucsb.edu/dataone/downlo... - 05:14 PM Bug #5869 (Resolved): Test morpho 2.0 on windows
- Both Ben and I are working morpho on Mac OS X. We need to test it on windows.
The tests inlcude:
1. Upgrade the mo... - 05:23 PM Bug #5805: Local and Network revisions show at same time in search results
- When there are many local documents, it can take a long time to check the network for newer versions of the document....
- 11:55 AM Bug #5805: Local and Network revisions show at same time in search results
- Now checking if the network revision history has a newer version of the local package.
- 05:02 PM Bug #5858: Does the system metadata need the obsoletedBy element?
- In the local save and delete processes, the obsoletedBy element is handled.
- 12:40 PM Bug #5809: Default save behavior to always include local store
- Does this effectively communicate that Local saving is required?
- 12:15 PM Bug #5863: After deleting the newest version of a package locally, the search and open don't show the previous version
- Add the code to remove the deleted docid from the revision history during the delete process. This bug was fixed.
02/15/2013
- 10:30 AM Bug #5868: Some weird behavior when morpho deletes a network data package with data file
- The problem is there is no null check for the id. If an id is null, the anotherId.equal(id) will have NullPointerExce...
02/14/2013
- 10:44 PM Bug #5867: Make CILogon/ECP settings configurable
- I actually can't imagine a normal user editing these cryptic ECP urls. Advanced users can switch to a testing environ...
- 02:28 PM Bug #5867: Make CILogon/ECP settings configurable
- I've added these to the config.xml file, but not yet in the advanced tab.
- 09:03 AM Bug #5867 (Resolved): Make CILogon/ECP settings configurable
- In the advanced tab, we should allow editing of:
-Identity Service Provider URL (CILogon)
-CILogon skin
-List of a... - 10:41 PM Bug #5864: ECP login causes new DN so user's can't see their data
- This is resolved in the sense that Morpho has been updated to search for packages that are owned by any of the equiva...
- 04:00 PM Bug #4816: reloading unfinished New Data Package ???
- This bug was fixed.
- 03:58 PM Bug #5866: Needs correct behavior for saving both when the saving network fails
- During the saving both process, the exceptions for local saving and network saving is caught separately. Morpho can s...
- 03:54 PM Bug #5861: Local delete doesn't delete the file storing the system metadata
- Now morpho will delete both the metadata (including the associated system metadata) and the ore document(including th...
- 02:22 PM Bug #5861: Local delete doesn't delete the file storing the system metadata
- yeah. we should keep the data file. Actually, the delete doesn't remove the data file.
However, I think we should re... - 02:47 PM Bug #5868 (Resolved): Some weird behavior when morpho deletes a network data package with data file
- Here are the steps to produce the issue:
1. Use the new data package wizard and entity wizard to generate a data pac... - 09:33 AM Bug #5859: Resource map contains previous data file version
- Basically, the action should update the metadata map in DataPackage was replaced by the add. So there were current an...
02/13/2013
- 05:12 PM Bug #5866 (Resolved): Needs correct behavior for saving both when the saving network fails
- When we choose to save a data package to the both location, the result of saving is the unsaved morpho frame (the fra...
- 12:32 PM Bug #5864: ECP login causes new DN so user's can't see their data
- I've now included the equivalent identities (listed in the CILogon certs that contain SubjectInfo) as additional <own...
02/12/2013
- 10:42 PM Bug #5861: Local delete doesn't delete the file storing the system metadata
- I think it's safe to remove the SystemMetadata file as well. We should not, however, delete any referenced data files...
- 06:15 PM Bug #5861 (Resolved): Local delete doesn't delete the file storing the system metadata
- The delete of local data package does delete the package itself. But it doesn't delete the stored system metadata file.
- 10:40 PM Bug #5862: update Readme to refer to DataONE
- Updated readme to include DataONE but still keep an emphasis on the KNB as default member node.
- 06:15 PM Bug #5862 (Resolved): update Readme to refer to DataONE
- The current Readme file that is displayed in the installer references uploading data to the KNB, but does not acknowl...
- 10:26 PM Bug #5864: ECP login causes new DN so user's can't see their data
- On #1, yes, we are using a different account. I could have set up the test KNB IdP to use the o=NCEAS tree but I used...
- 06:25 PM Bug #5864 (Resolved): ECP login causes new DN so user's can't see their data
- Logging into the new version of Morpho using ECP has two negative side effects that need to be resolved.
1) The EC... - 06:20 PM Bug #5863 (Resolved): After deleting the newest version of a package locally, the search and open don't show the previous version
- Here are steps:
1. create a data package and save it.
2. update the title and save it again.
3. delete the packa... - 06:07 PM Bug #5801: Test Morpho against GMN
- There is no any particular issue for the the GMN. So i close it.
- 06:05 PM Bug #5860: When morpho saves a network data package to local, the system metadata may contain id (obsoletes) which doesn't exist
- Since the other way - saving locally first then saving both, works, we move this bug to 2.1
- 03:45 PM Bug #5860: When morpho saves a network data package to local, the system metadata may contain id (obsoletes) which doesn't exist
- This is tricky. I know we decided a while back that we should manage the revision history separately for local vs. ne...
- 04:57 PM Bug #5848: Ensure Morpho can edit EML contributed by DataUp
- Basic open operation works, but as noted in the comments, editing these packages will be tricky since Morpho expects ...
- 04:55 PM Bug #5856: Morpho says that the network access policy has been set successfully, but actually it didn't
- The boolean operation when calling local vs. network was short circuiting when it was network-only and not even calli...
- 04:32 PM Bug #5856: Morpho says that the network access policy has been set successfully, but actually it didn't
- I just created a package by the new data package wizard and saved it to the network. Then I added a new rule and it s...
- 03:58 PM Bug #5856: Morpho says that the network access policy has been set successfully, but actually it didn't
- I tried this with the same set-up you describe, but get an error message about the object not being on the CN (as exp...
- 03:47 PM Bug #5859: Resource map contains previous data file version
- Is this just a problem with the code that "updates" the identifier of data.1 to data.2 not properly removing the orig...
- 03:40 PM Bug #5858: Does the system metadata need the obsoletedBy element?
- It is probably a good idea to set them both, but I am not sure it is required locally. On the MN we do set the obsole...
- 11:13 AM Bug #5857: A package just created by the new package wizard has an obsoletes element in the system metadata
- Add code to check if the obsoleted id exists. If the id exists, morpho will set up the obsoletes element in the syste...
02/11/2013
- 11:17 PM Bug #5860 (Resolved): When morpho saves a network data package to local, the system metadata may contain id (obsoletes) which doesn't exist
- Here are the steps to produce the bug:
1. Create a data package with data object and save it to the network. It cont... - 10:26 PM Bug #5859 (Resolved): Resource map contains previous data file version
- Here are steps to produce the bug:
1. Use the new data package and entity wizards to create a data package foo.1 and... - 09:36 PM Bug #5858 (Resolved): Does the system metadata need the obsoletedBy element?
- I created data package foo.1 and saved it locally. Then I modified the data package and saved it foo.2. The system me...
- 09:20 PM Bug #5857 (Resolved): A package just created by the new package wizard has an obsoletes element in the system metadata
- I just created a data package by using the new data package wizard. When I checked the system metadata, it has a obso...
- 05:31 PM Bug #5856: Morpho says that the network access policy has been set successfully, but actually it didn't
- Good question. I checked the access policy on the MN. I just checked the cn. The data package identifier doesn't exis...
- 05:13 PM Bug #5856: Morpho says that the network access policy has been set successfully, but actually it didn't
- Are you checking the access rules on the CN or the MN? Updates to the access policy are made to the CN for packages t...
- 05:04 PM Bug #5856 (Resolved): Morpho says that the network access policy has been set successfully, but actually it didn't
- I opened a network data package(network only) and add a new rule from the Documentation|Access Information menu.
T... - 05:19 PM Bug #5855: The online copy doesn't show the last update
- The problem was that the assignment of the new id was driven by if the identifier existed in the target location. If ...
- 04:58 PM Bug #5854: Include Replication Policy screen in the NDP wizard sequence
- Need to figure out an elegant way to include SM information in the wizard workflow. Access rules fit in the EML file,...
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