Activity
From 10/03/2006 to 11/01/2006
11/01/2006
- 07:36 AM Bug #2639 (Closed): Inferred relationships too broad
- The Carya glabra example reveals a new bug. All of USDA and RAB map
as ambiguous. This should not be the case beca... - 07:35 AM Bug #2638 (New): Ambiguous records should have details of ambiguity clickable
- Discussion from Peter White with RKP responses:
> Makes we wonder if we need to parse the kinds of ambiguity. Is th... - 07:09 AM Bug #2637 (New): RAB records of nominal variety occurrences have incomplete name
- Weakley writes:
Note all the yellow RAB dots for Ilex longipes, when longipes is unambiguously mapped by RAB as deci... - 06:48 AM Bug #2636: Better labels for ambiguous occurrences
- Peter White writes:
I wonder if it should be Carya glabra AND/OR Carya ovalis. If the
record is based on lumping, b... - 01:35 AM Bug #2636 (Closed): Better labels for ambiguous occurrences
- This is an upgrade; not an error.
Ambiguous identifications have a legend entry that states the name that was foun... - 05:08 AM Bug #2610: 29. Sources of ambiguous records.
- I think this is a good idea. How difficult is Steve's proposed fix? I am a little concerned about the busy-ness iss...
- 02:17 AM Bug #2619: Systematic error in determination of nominals
- This is closely related to bug 2627. In both cases the key issue is that nominal concepts must be either > or = all ...
- 02:09 AM Bug #2627: Nominal concepts should not overlap Weakley concepts
- I reiterate that I think the definition of the nominal concept should be that concept that includes all the other con...
- 01:53 AM Bug #2617: 36. The Data Source tab
Seems like the programming would not be that hard if the current source page were maintained as a not visible page, ...
10/31/2006
- 09:51 PM Bug #2627: Nominal concepts should not overlap Weakley concepts
- The relationship of Weakley's concept to a nominal concept is inferred based on all possible relationships to the con...
- 09:37 PM Bug #2619: Systematic error in determination of nominals
- Not really. The reason is that there is relationship:
Carya ovata (Alan Weakley) < Carya ovata (FNA)
XIanhua - 09:25 PM Bug #2617: 36. The Data Source tab
- The legend is dynamically created by the server to reflect changes in data source selection. It is hard, if not possi...
- 09:17 PM Bug #2614: 33. Map source issues
- fixed
- 09:00 PM Bug #2612: 31. Specimen data (fix typo)
- Fixed
- 08:57 PM Bug #2607: 26. Misfunction on back-to-query button
- fixed
- 08:19 PM Bug #2601: Explanation of relationship symbols “>†and “<†reversed
- Fixed
10/30/2006
- 03:26 PM Bug #2634 (Closed): Data source description errors
- Two text errors on the data source description page.
1. The NCU description should be changed to read:
"Those sp... - 03:20 PM Bug #2633 (Closed): Remove search button from search page
- Including the “Search†button on the search page itself seems unnecessary and potentially confusing to users.
- 03:18 PM Bug #2618: Server errors; incompatability with Windows 2000 OS
- Seiberling reported "When using the Firefox browser, the map page gives an error message, “Unable to display MapSer...
- 03:11 PM Bug #2608: 27. Browser compatibility testing
- The specific part of this bug related to crashes has been incorporated in bug 2618 (= but 37).
However, this does no... - 03:03 PM Bug #2604: 23. County and state pulldowns
- Steve Seiberling reports:
The search page sometimes continues to be displayed for several moments after entering a ge... - 03:00 PM Bug #2581: Children should occur in map of parent
- There remains a pervasive and important problem that a map of a taxon does not necessarily include its children. Thi...
- 01:41 PM Bug #2632: How to store one module plots - no subplots?
- I vote to have only S for one module plots
- 11:48 AM Bug #2632 (Resolved): How to store one module plots - no subplots?
- We currently use subplots with our multiple module plots. This seems unnecessary for one module plots (such as level...
- 01:27 PM Bug #2617: 36. The Data Source tab
- 27 Oct 06 Peter White sent RKP an email as follows: " One question on the atlas, that probably has come up and will b...
10/29/2006
- 12:30 PM Bug #2600: ID number on the specimen & images pages needs revision
- Fixed
- 12:09 PM Bug #2595: 14. The search box pick list seems to work inconsistently for species with infraspecific taxa.
- Updated the weakley's concepts list
- 11:54 AM Bug #2593: 12. On the Home page, the green color for "Other data sources" is not the same green
- Fixed
- 11:48 AM Bug #2592: 11. The "Home" button should probably be changed to something like “About†...
- Fixed.
- 11:34 AM Bug #2591: 10. Image thumbnails use large files
- FIxed
- 11:12 AM Bug #2580: 1. Incorrect links to specimen images
- Fixed in testing site: http://152.2.14.231/website/NCFloraTest
- 11:09 AM Bug #2584: 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records
In NCU flora (the website), different data sources (e.g. CVS, NCU) follow different concept standands (e.g. Weakley,...- 11:07 AM Bug #2581: Children should occur in map of parent
- In NCU flora (the website), different data sources (e.g. CVS, NCU) follow different concept standands (e.g. Weakley, ...
10/27/2006
- 04:12 PM Bug #2631: Annotate demonstration set of databased speciemens to concept
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:06 PM Bug #2631 (New): Annotate demonstration set of databased speciemens to concept
- In our dreams
- 04:12 PM Bug #2630: Verification that CVS records map correctly to Weakley
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:05 PM Bug #2630 (New): Verification that CVS records map correctly to Weakley
- Bug assigned to Bob to scope for Alan
- 04:12 PM Bug #2629: Relationships between Weakley to USDA v 4.0 concepts
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:05 PM Bug #2629 (New): Relationships between Weakley to USDA v 4.0 concepts
- Bug assigned to Bob to scope for Xianhua
- 04:12 PM Bug #2628: Dynamic versioning
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:04 PM Bug #2628 (New): Dynamic versioning
- As discussed earlier, we need to embed a start and stop date in ConceptMapper for each Weakley relationship. Ultimat...
- 04:12 PM Bug #2627: Nominal concepts should not overlap Weakley concepts
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:04 PM Bug #2627 (Closed): Nominal concepts should not overlap Weakley concepts
- Continuing on the Sporobolus pinetorum example, there are some problems determining and mapping nominals where the ma...
- 04:12 PM Bug #2626: 45. Negative occurrences
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:03 PM Bug #2626 (New): 45. Negative occurrences
- We need a new color on the map and a way to database negative occurrences. Some records in sources like Weakley and ...
- 04:12 PM Bug #2625: 44. Bug resolved
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:03 PM Bug #2625: 44. Bug resolved
- resolved
- 04:03 PM Bug #2625 (Closed): 44. Bug resolved
- placeholder
- 04:12 PM Bug #2624: 43. Paging through large families.
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:03 PM Bug #2624 (Closed): 43. Paging through large families.
- If I go to a large family like Poaceae I see 10 pages and a next at the top right of the list of taxa. However, when...
- 04:12 PM Bug #2623: 42. TaxonProgress updates
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:02 PM Bug #2623 (Closed): 42. TaxonProgress updates
- We need a way to keep the TaxonProgress table up to date. I think Lisa can do this if you rework the table a bit. T...
- 04:12 PM Bug #2622: Modify Specify to allow determination to concept
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:02 PM Bug #2622 (New): Modify Specify to allow determination to concept
- We need to add some preliminary concept support to NCU Specify. The Kansas folks have agreed (in principle) to add a...
- 04:12 PM Bug #2621: 40. Concepts for CVS data?
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:01 PM Bug #2621 (New): 40. Concepts for CVS data?
- Add support of concepts to CVS data. In short, migrate from all CVS being Weakley concepts to explicit statement of c...
- 04:12 PM Bug #2620: 39. Bug resolved
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:01 PM Bug #2620: 39. Bug resolved
- was fixed by the time the original document came to Michael Lee
- 04:01 PM Bug #2620 (Closed): 39. Bug resolved
- placeholder
- 04:12 PM Bug #2619: Systematic error in determination of nominals
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:00 PM Bug #2619 (Closed): Systematic error in determination of nominals
- Carya ovata Weakley ? Carya ovata nominal should be
Carya ovata Weakley < Carya ovata nominal.
Perhaps this error ... - 04:12 PM Bug #2618: Server errors; incompatability with Windows 2000 OS
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 04:00 PM Bug #2618 (Closed): Server errors; incompatability with Windows 2000 OS
- This bug is essentially a duplicate of Bug 2608 (originally #27)
Weakley asks “Why does the search crap out when... - 04:12 PM Bug #2617: 36. The Data Source tab
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:58 PM Bug #2617 (Closed): 36. The Data Source tab
- The data source tab of the map should be combined with the legend so that the click on and off option is immediately ...
- 04:12 PM Bug #2616: 35. Click on county
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:58 PM Bug #2616 (Closed): 35. Click on county
- “Sources†information you see when you click on a country record is awkward. First, it would be nicer if the win...
- 04:12 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:58 PM Bug #2615 (Closed): Failure to map WEWO and other non-NCU series in Specify
- The herbarium has a small but growing collection of NCSU collections. These appear on the map, but not in the list o...
- 04:12 PM Bug #2614: 33. Map source issues
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:57 PM Bug #2614 (Closed): 33. Map source issues
- If I go to Acer floridanum and remove all data sources except the three from NCU, or all except UNC-Acer barbatum and...
- 04:12 PM Bug #2613: 32. Trilliaceae (Missing)
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:57 PM Bug #2613 (Closed): 32. Trilliaceae (Missing)
- Trilliaceae is missing from the family search list (though you can find it as a suggestion next to Liliaceae).
- 04:12 PM Bug #2612: 31. Specimen data (fix typo)
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:56 PM Bug #2612 (Closed): 31. Specimen data (fix typo)
- On detailed specimen data, replace "Determinator" with "Determiner"
- 04:12 PM Bug #2611: Help function text
- This bug is originally from "other ideas and observations from Peet and Weakley"
- 03:56 PM Bug #2611 (New): Help function text
- Peet & Weakley need to add help options
- 04:11 PM Bug #2610: 29. Sources of ambiguous records.
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:55 PM Bug #2610 (Closed): 29. Sources of ambiguous records.
- ---THIS BUG CO-OWNED BY XIANHUA--
Related to this is the question of whether to lump all ambiguous data under sing... - 04:11 PM Bug #2609: Erroneous assignment of ambiguous status
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:54 PM Bug #2609: Erroneous assignment of ambiguous status
- RKP:
I don’t think you are correct as to what the software does. Acer rubrum is not a good example because Weakley... - 03:53 PM Bug #2609 (New): Erroneous assignment of ambiguous status
- These last two issues are philosophical ones, rather than anything deriving from errors in the software or problems i...
- 04:11 PM Bug #2608: 27. Browser compatibility testing
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:53 PM Bug #2608 (Closed): 27. Browser compatibility testing
- --THIS BUG TO BE PASSED TO XIANHUA IN TIME--
When using the Firefox browser, the map page gives an error message, ... - 04:11 PM Bug #2607: 26. Misfunction on back-to-query button
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:51 PM Bug #2607 (Closed): 26. Misfunction on back-to-query button
- After displaying a distribution map and clicking “Go back to query resultâ€, selecting a page number in the query ...
- 04:11 PM Bug #2606: 25. Complex searches
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:50 PM Bug #2606 (Closed): 25. Complex searches
- The site currently does not allow one to combine plant name and geographic search functions, nor family and geographi...
- 04:11 PM Bug #2605: 24. Search all counties in a state
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:50 PM Bug #2605 (Closed): 24. Search all counties in a state
- We think searching all counties within a state was an option previously. This seems useful.
RKP:
If I understand... - 04:11 PM Bug #2604: 23. County and state pulldowns
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:49 PM Bug #2604 (Closed): 23. County and state pulldowns
- The state and county search pull-down menus revert to North Carolina, Alamance, almost immediately after clicking the...
- 04:11 PM Bug #2603: 22. Display county names
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:47 PM Bug #2603 (Closed): 22. Display county names
- We like the idea of displaying county names by placing the cursor on the county when zoomed in one increment or more....
- 04:11 PM Bug #2602: Document concept references in Weakley flora
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:47 PM Bug #2602 (Closed): Document concept references in Weakley flora
- The “Z†abbreviation for Concept Sources on the Relationships page should give the specific reference.
RKP:
... - 04:11 PM Bug #2601: Explanation of relationship symbols “>†and “<†reversed
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:46 PM Bug #2601 (Closed): Explanation of relationship symbols “>†and “<†reversed
- RKP:
Yes, a simple typo that needs to be corrected soon. - 04:11 PM Bug #2600: ID number on the specimen & images pages needs revision
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:46 PM Bug #2600 (Closed): ID number on the specimen & images pages needs revision
- ID # given for specimens on the Images page appears to be an internal database number. Probably want accession numbe...
- 04:11 PM Bug #2599: 18. The "?" help buttons display pages with no content.
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:45 PM Bug #2599 (Closed): 18. The "?" help buttons display pages with no content.
- [Bob co-owns this bug.]
RKP:
This is because Alan has been sitting on his lazy ass and doing absolutely nothing f... - 04:11 PM Bug #2598: 17. Apostrophes
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:44 PM Bug #2598 (Closed): 17. Apostrophes
- SQL must have an aversion to apostrophes, replacing it with ' on the specimen information. This is probably not ...
- 04:11 PM Bug #2597: Display of cultivated records should be optional
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:43 PM Bug #2597 (Closed): Display of cultivated records should be optional
- The distribution maps appear to treat cultivated specimen records the same as non-cultivated
RKP:
That is the cur... - 04:11 PM Bug #2596: 15. Alphabetize synonyms
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:43 PM Bug #2596 (Closed): 15. Alphabetize synonyms
- When a search result displays synonyms, the synonyms listed under each recognized taxon are not displayed in alphabet...
- 04:11 PM Bug #2595: 14. The search box pick list seems to work inconsistently for species with infraspecific taxa.
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:42 PM Bug #2595 (Closed): 14. The search box pick list seems to work inconsistently for species with infraspecific taxa.
- For example, Acer rubrum is given as a choice, along with its varieties; Quercus rubra is not shown, only its varieti...
- 04:11 PM Bug #2594: Home page explanation of atlas, including ambiguous records
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:42 PM Bug #2594 (Closed): Home page explanation of atlas, including ambiguous records
- RKP:
We agree. Alan and I have agreed to write some text for this, both for the home page and for the “?†link... - 04:11 PM Bug #2593: 12. On the Home page, the green color for "Other data sources" is not the same green
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:41 PM Bug #2593 (Closed): 12. On the Home page, the green color for "Other data sources" is not the same green
- On the Home page, the green color for “Other data sources†is not the same green used in the actual maps.
RKP:... - 04:11 PM Bug #2592: 11. The "Home" button should probably be changed to something like “About†...
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:40 PM Bug #2592 (Closed): 11. The "Home" button should probably be changed to something like “About†...
- The “Home†button should probably be changed to something like “About†in order to more clearly identify the ...
- 04:11 PM Bug #2591: 10. Image thumbnails use large files
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:39 PM Bug #2591 (Closed): 10. Image thumbnails use large files
- Displayed thumbnails for specimen images in the SE Flora web pages are full-sized JPEGs that are made to appear small...
- 04:11 PM Bug #2590: "get missing taxa" search
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:39 PM Bug #2590 (Closed): "get missing taxa" search
- We think that selecting more than one data source in the “get missing taxa†search should work as an “and†fu...
- 04:11 PM Bug #2589: Concepts as the basis for returning specimens and images.
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:38 PM Bug #2589 (Closed): Concepts as the basis for returning specimens and images.
- Some names treated as synonyms in Weakley do not appear when searched in the SE Flora pages. For example, searching ...
- 04:11 PM Bug #2588: Specimen & Image lists should include infraspecific taxa
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:38 PM Bug #2588 (Closed): Specimen & Image lists should include infraspecific taxa
- When a species has recognized infraspecific taxa, the logic for distribution maps appears to be at odds with that for...
- 04:11 PM Bug #2587: Inability to search on taxa not treated by Weakley
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:37 PM Bug #2587 (New): Inability to search on taxa not treated by Weakley
- At least some taxa treated as current in Specify do not show up when using the SE Flora search functions. For exampl...
- 04:11 PM Bug #2586: 5. Document the source of data for USDA PLANTS
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:36 PM Bug #2586 (Closed): 5. Document the source of data for USDA PLANTS
- Distribution maps of USDA data on SE Flora atlas site sometimes do not match the county-level distribution maps on th...
- 04:11 PM Bug #2585: Allow ambiguous records only in states where taxon occurs
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:35 PM Bug #2585 (Resolved): Allow ambiguous records only in states where taxon occurs
- In some cases records are treated as ambiguous for no apparent reason. For example, a search on Adiantum pedatum sho...
- 04:11 PM Bug #2584: 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:35 PM Bug #2584 (Closed): 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records
- Ambiguous data sources are mapped in yellow, except ambiguous CVS data sources, which are mapped in their usual Carol...
- 04:11 PM Bug #2583: Compile complex and undefined concept relationships
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:34 PM Bug #2583 (Closed): Compile complex and undefined concept relationships
- RKP:
Concept mapping for Hymenocallis occidentalis var. occidentalis to K and to nominal is given as ? relative to H... - 04:11 PM Bug #2582: 2A. Show parents as ambiguous members
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:33 PM Bug #2582 (Closed): 2A. Show parents as ambiguous members
- RKP:
A different but related issue is whether a CVS only map of Acer rubrum var. rubrum should show Acer rubrum with... - 04:11 PM Bug #2581: Children should occur in map of parent
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:31 PM Bug #2581 (In Progress): Children should occur in map of parent
- Mapping of CVS data is not handled consistently for taxa with infraspecific members. For example, a search on Acer r...
- 04:11 PM Bug #2580: 1. Incorrect links to specimen images
- contributed by Lisa Giencke & Stephen Seiberling
Comments by Bob Peet followed by RKP:
- 03:13 PM Bug #2580 (Closed): 1. Incorrect links to specimen images
- Herbarium specimen images located on ibiblio <http://www.ibiblio.org/botnet/flora/images/> appear to be correctly lin...
- 12:20 PM Bug #2574 (Resolved): update species in old archive database from Forbes
- Forbes has added some new plots to the database, and the species codes need updating, as do older NC_Codes that were ...
10/13/2006
- 02:25 PM Bug #2565 (Resolved): allow multiple values for categorical fields
- People check multiple boxes in the field, so unless we redesign the datasheets to prevent that, we have to either cho...
10/11/2006
- 03:55 PM Bug #2559: Limit the taxa to non-woody species for EEP databases
- Bob provided the woody values, Michael has implemented in version 2.0.2
Now is smart enough to show only woody stems...
10/03/2006
- 03:10 PM Bug #2560 (Resolved): Implement revision system for new revisions
- Bob and Forbes have lists of revisions needing to be made. I have written some code that will digest and archive thi...
- 03:08 PM Bug #2559: Limit the taxa to non-woody species for EEP databases
- I have gone through the list and come up with a first cut, Bob and Forbes are confirming what I have done and dealing...
- 03:06 PM Bug #2559 (Resolved): Limit the taxa to non-woody species for EEP databases
- We need to have a version of the database that contains only woody species that will be used for levels 1-2 sampling....
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