InfoVeg

03/16/2007

02:02 PM Bug #2802 (Resolved): Height error not specified in unfolding

height error doesn't seem to be correctly populated in the unfolding process. Michael Lee

12:25 PM Bug #2801: reports get confused with level 2 data

need to include "missing" vigor values (a new value) Michael Lee

12:24 PM Bug #2801 (Resolved): reports get confused with level 2 data

Need to filter out natural stems from reports as they throw the species numbers, plus the default report is not desig... Michael Lee

11:37 AM Bug #2800 (Resolved): DBA screens do not check for header notes to be OK'd

The notes for each species are checked, but the ones for the full plot aren't, but sometimes these notes impact thing... Michael Lee

03/15/2007

07:59 PM Bug #2684: Miscellaneous literature records for distribution

Yes, this is big operation. Many aspects need to be changed since current system has been designed under an situation... xianhua liu

03/13/2007

07:41 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name

Thanks. I am clear now about the issue. Here enclosed please find the excel file that contains all the Vars in RAB co... xianhua liu

07:12 PM Bug #2626: 45. Negative occurrences

I added a column in the distribution table to store the validity status of distribution record. The admin interface h... xianhua liu

06:00 PM Bug #2626: 45. Negative occurrences

question:
Since these records are wrong, would not it be better to just remove them from the map? Anyway, they contr... xianhua liu

07:08 PM Bug #2678: Create tool for editing static database records of taxon occurrence

The tool is available at http://herbarium.unc.edu/seflora/admin for editing records in the static database of occurre... xianhua liu

06:23 PM Bug #2784: Community tab should be based on Weakley taxa and not nominals

fixed xianhua liu

06:08 PM Bug #2636: Better labels for ambiguous occurrences

I guess this issue has been resolved by listing individual sources for ambiguous records instead of lumping them in o... xianhua liu

05:42 PM Bug #2585: Allow ambiguous records only in states where taxon occurs

First, let me explain why Adiantum pedatum from NCU is ambiguous.
We have relationships:
1. Adiantum pedatum (Weakle... xianhua liu

03/09/2007

07:35 PM Bug #2623: 42. TaxonProgress updates

fied xianhua liu

05:15 PM Bug #2651: font issues with various browsers

fixed xianhua liu

04:55 PM Bug #2793: Reorder search on homepage

fixed xianhua liu

12:17 PM Bug #2794: Test WinZip integration with various versions

Note added:
in v205p5 Michael Lee

11:49 AM Bug #2794: Test WinZip integration with various versions

Also works with WinZip 11 eval version. Pro is not required for command-line functionality that we use with batch fi... Michael Lee

11:33 AM Bug #2794: Test WinZip integration with various versions

works fine with WinZip 9.0 (eval version) Michael Lee

11:19 AM Bug #2794 (Resolved): Test WinZip integration with various versions

I have WinZip 8.0
UNC has a WinZip 9.0 to download (eval)
and WinZip has 11.0 to download (requiring Pro for comman... Michael Lee

03/08/2007

07:53 PM Bug #2793 (Closed): Reorder search on homepage

Most visitors will be searching for a taxon rather than trying to generate a list of taxa. Let's reorder the first p... Robert Peet

07:50 PM Bug #2656: County lists should include ambiguous records

My main concern is that this is such a complex query that performance will be terrible. I am willing to drop this bu... Robert Peet

07:45 PM Bug #2606: 25. Complex searches

closed Robert Peet

07:45 PM Bug #2606: 25. Complex searches

I am now convinced this bug is very poorly circumscribed and should be closed until such time as someone thinks throu... Robert Peet

07:00 PM Bug #2606: 25. Complex searches

This could be related to the bug 2656 (http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2656) since geographic area... xianhua liu

07:31 PM Bug #2790: Incorrect stacking of map records

fixed Robert Peet

07:16 PM Bug #2790: Incorrect stacking of map records

fixed xianhua liu

06:20 PM Bug #2790: Incorrect stacking of map records

Great! The stacking order is now correct.
However, let's also change the explanation. Reorder the colored key be... Robert Peet

05:58 PM Bug #2790: Incorrect stacking of map records

Sorry!
Fixed now. xianhua liu

05:46 PM Bug #2790: Incorrect stacking of map records

Well, no, not yet fixed. Perhaps Jeff failed to explain the problem clearly.
Consider Quercus alba. Robeson County ... Robert Peet

05:07 PM Bug #2790: Incorrect stacking of map records

fixed xianhua liu

12:01 PM Bug #2790: Incorrect stacking of map records

The ordering of records should be revised so that documented occurrences always appear on top of ambiguous records. ... Jeff Ott

06:11 PM Bug #2789: Optional reporting of ambiguous records

fixed Robert Peet

06:10 PM Bug #2757: Concept relationships in county clickover need reordering

fixed Robert Peet

06:05 PM Bug #2589: Concepts as the basis for returning specimens and images.

fixed Robert Peet

05:51 PM Bug #2589: Concepts as the basis for returning specimens and images.

fixed.
The ambiguous specimens and images are shown in gray background. xianhua liu

05:57 PM Bug #2651: font issues with various browsers

Problem is still there.
When I create a map with IE8 I see the species name in the upper left in bold font that is t... Robert Peet

05:52 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify

Fixed Robert Peet

03/07/2007

07:09 PM Bug #2623: 42. TaxonProgress updates

Lisa:
I wonder if there is a management console tool that I can use to access the Specify database remotely from my ... xianhua liu

06:49 PM Bug #2651: font issues with various browsers

fixed xianhua liu

05:29 PM Bug #2784: Community tab should be based on Weakley taxa and not nominals

Should the parent concept and children concepts be included in the query result? For example, if querying by Cleistes... xianhua liu

05:19 PM Bug #2790: Incorrect stacking of map records

Fixed. The current order of records is:
1. NCU > NCSC > WEWO > X-ILL > CPE > NCNHP > RAB > USDA > CVS
2. Within one ... xianhua liu

03/05/2007

02:29 PM Bug #2791 (Resolved): Out of Stack space (access 2000)

Hello. I have encountered another error with the new version of the vegetation database. [v 2.0.4]
When I begin t... Michael Lee

03/04/2007

02:05 PM Bug #2790: Incorrect stacking of map records

Again, for Cleistes bifaria:
look at Brunswick Co, NC, the southeastern most county in the state.
Also Harnett, Onslo... Robert Peet

01:38 PM Bug #2790: Incorrect stacking of map records

It seems fine to me. Could you please specify the name of one county where this problem happens, so I can quickly tes... xianhua liu

12:40 PM Bug #2790 (Closed): Incorrect stacking of map records

I mapped Cleistes bifaria. I then turned off the ambiguous records and saw several previously hidden unambiguous her... Robert Peet

01:30 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify

fixed xianhua liu

06:23 AM Bug #2615: Failure to map WEWO and other non-NCU series in Specify

County records from the WEWO series are not being mapped, but do show up in the specimens, and when one clicks on a c... Robert Peet

01:26 PM Bug #2754: X-IL record does not appear on map; Need category for misc records

Fixed.
The reason why X-IL records do not show up is that the herbarium specify database uses "X-ILL" (sometimes "X... xianhua liu

06:44 AM Bug #2754: X-IL record does not appear on map; Need category for misc records

The X-IL record appears in specimens but not on the map
Unlike the related problem with WEWO (bug 2615), we here do ... Robert Peet

01:21 PM Bug #2767: Adjust colors on maps

fixed Robert Peet

12:34 PM Bug #2767: Adjust colors on maps

fixed xianhua liu

06:01 AM Bug #2767: Adjust colors on maps

One more try
Current color New colors
Red Dark: 255-0-0 255-0-60
Red Light: ... Robert Peet

05:09 AM Bug #2767: Adjust colors on maps

One more try at getting the colors right
Current color New colors
Red Dark: 255-0-0 ... Robert Peet

12:39 PM Bug #2757: Concept relationships in county clickover need reordering

fixed xianhua liu

04:34 AM Bug #2757: Concept relationships in county clickover need reordering

Close, but need to reorder components
Current order = Source | Rel. | Name | Cult.
New order = Rel. | Name | So... Robert Peet

12:23 PM Bug #2789: Optional reporting of ambiguous records

Fixed xianhua liu

08:30 AM Bug #2789 (Closed): Optional reporting of ambiguous records

On the map page, immediately above the cultivated check boxes, as a check box for show ambiguous records that default... Robert Peet

08:25 AM Bug #2788 (New): Kentucky atlas data

Add West Virginia and Kentucky atlas data. Provide place for these in legend. Initially treat as nominals unless we... Robert Peet

08:21 AM Bug #2699: Tool for users to submit county records

Postpone until next funding cycle Robert Peet

08:21 AM Bug #2698: Add traits tab

Bob needs to compile trait data for implementation. Robert Peet

08:18 AM Bug #2585: Allow ambiguous records only in states where taxon occurs

This is relatively important.
We can provide a list of states of occurrence for each of the Weakley concepts as a ... Robert Peet

08:10 AM Bug #2589: Concepts as the basis for returning specimens and images.

This should be quick and easy Robert Peet

08:09 AM Bug #2657: Highlight species with too few counties and those with too many

depends on bug 2640 -- on hold for now Robert Peet

07:06 AM Bug #2657: Highlight species with too few counties and those with too many

duplicate bug Robert Peet

08:07 AM Bug #2725: Create log of changes generated by the Administration Page

postpone untilnext funding cycle Robert Peet

08:04 AM Bug #2725: Create log of changes generated by the Administration Page

Postpone until the next funding cycle Robert Peet

08:03 AM Bug #2630: Verification that CVS records map correctly to Weakley

Forbes will compile the list of taxon occurrences in the CVS database and pass on problems for RKP and AW to resolve.... Robert Peet

08:00 AM Bug #2602: Document concept references in Weakley flora

For 10779 concepts in the Weakley flora, specific references have not been ported into the seflora database. Jess lo... Robert Peet

07:13 AM Bug #2638: Ambiguous records should have details of ambiguity clickable

Postpone to next funding cycle Robert Peet

07:05 AM Bug #2584: 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records

done Robert Peet

07:05 AM Bug #2584: 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records

text will be part of homepage revision Robert Peet

07:03 AM Bug #2583: Compile complex and undefined concept relationships

Similar to bug 2583
Need to compile all the complex and ambiguous relationships and provide these to Alan as a set f... Robert Peet

07:00 AM Bug #2594: Home page explanation of atlas, including ambiguous records

Need to rewrite the homepage to explain the site, including ambiguous records. Robert Peet

06:58 AM Bug #2631: Annotate demonstration set of databased speciemens to concept

Hold for next funding cycle
Need a demonstration dataset of annotated specimens. Perhaps Andropogon of Juglandaceae. Robert Peet

06:56 AM Bug #2683: User submissions of new occurrence records

Hold for next funding cycle Robert Peet

06:55 AM Bug #2628: Dynamic versioning

This will be held for the next funding cycle Robert Peet

06:51 AM Bug #2599: 18. The "?" help buttons display pages with no content.

dup 2611 Robert Peet

06:51 AM Bug #2599: 18. The "?" help buttons display pages with no content.

Duplicate of 2611
*** This bug has been marked as a duplicate of 2611 *** Robert Peet

06:51 AM Bug #2611: Help function text

*** Bug 2599 has been marked as a duplicate of this bug. *** Robert Peet

06:49 AM Bug #2611: Help function text

Need to provide specific help messages to be referenced by the help symbol on the webpage. Robert Peet

06:47 AM Bug #2653: Removal of Databased Publications

fixed Robert Peet

06:47 AM Bug #2653: Removal of Databased Publications

fixed by Lisa Robert Peet

06:26 AM Bug #2604: 23. County and state pulldowns

fixed Robert Peet

06:26 AM Bug #2604: 23. County and state pulldowns

seems to be fixed Robert Peet

06:08 AM Bug #2783: Tomcat crashes -- ability to support multiple users needs verfication

fixed Robert Peet

06:08 AM Bug #2783: Tomcat crashes -- ability to support multiple users needs verfication

problem had to do with the dynamic pick-lists
No fixed Robert Peet

06:06 AM Bug #2586: 5. Document the source of data for USDA PLANTS

ok Robert Peet

06:05 AM Bug #2586: 5. Document the source of data for USDA PLANTS

no changes needed at this time Robert Peet

05:12 AM Bug #2781: Provide download of concept relationships for a taxon

fixed Robert Peet

03/02/2007

03:19 PM Bug #2787: add entry_stems.isPlanted to interface?

Need to add this into the interface somehow, if we decide to regularly support this. Radio options between: all stem... Michael Lee

03:13 PM Bug #2787: add entry_stems.isPlanted to interface?

detecting and combining duplicates works, as does moving it over to the unfolded (treeDataBig/Sml). Michael Lee

02:46 PM Bug #2787: add entry_stems.isPlanted to interface?

fixing the various cases in stem data also needs to take this into account. Also, make sure the unknownSp field is t... Michael Lee

02:43 PM Bug #2787: add entry_stems.isPlanted to interface?

And that the fields in the database match each other correctly with Z_FieldDEsc Michael Lee

02:43 PM Bug #2787 (Resolved): add entry_stems.isPlanted to interface?

I added this field and need to make sure everything works nicely with it, specifically, the S module, detecting and c... Michael Lee

03/01/2007

02:50 PM Bug #2786 (Resolved): Need to add a "planted" field for Entry and Archive database

The problem is that at least once stems have been sampled that were planted. In any case, we should clearly mark pla... Michael Lee

02/27/2007

07:25 PM Bug #2784 (Closed): Community tab should be based on Weakley taxa and not nominals

In theory, the names in the CV database follow Weakley. Therefore, there is no reason to show communnities in which ... Robert Peet

07:13 PM Bug #2766: Add simple and full reference details and eliminate letter codes

fixed Robert Peet

07:04 PM Bug #2763: Misplaced determiniation data for specimens

fixed Robert Peet

05:50 PM Bug #2763: Misplaced determiniation data for specimens

fixed xianhua liu

06:51 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name

You completely misunderstand this bug. Let's start over. Perhaps you are confusing logical mapping with physical map... Robert Peet

05:19 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name

Let consider Ilex longipes example.
First of all we have following relationships:
1. Ilex longipes (Weakley 2005) ... xianhua liu

06:24 PM Bug #2783 (Closed): Tomcat crashes -- ability to support multiple users needs verfication

As soon as I advertised the website across the CVS and rare_flora listservs, tomcat started crashing a couple times a... Robert Peet

02/26/2007

07:59 PM Bug #2766: Add simple and full reference details and eliminate letter codes

Fixed.
1. added the note at the top of the relationship list
2. fixed bug in showing simple reference for 'C'
3. fix... xianhua liu

07:19 PM Bug #2781: Provide download of concept relationships for a taxon

fixed xianhua liu

10:21 AM Bug #2782: Add names of synonyms to the typing helper list

fixed Robert Peet

02/25/2007

12:20 PM Bug #2782: Add names of synonyms to the typing helper list

Fixed. Added ajax-based auto-completion dropdown list, which retrieves data dynamically from the database based on us... xianhua liu

02/23/2007

04:27 AM Bug #2782 (Closed): Add names of synonyms to the typing helper list

At present when you start to type a name to search by taxon, suggestions are offered that can be selected to avoid ad... Robert Peet

04:21 AM Bug #2781 (Closed): Provide download of concept relationships for a taxon

Add a relationships option to the download tab. This should provide a file with column equal to
Focal name (eg We... Robert Peet

04:13 AM Bug #2766: Add simple and full reference details and eliminate letter codes

Need to add explanitory text on relationships page below tabs and above the listed relationships that states "Move cu... Robert Peet

02/22/2007

06:56 PM Bug #2766: Add simple and full reference details and eliminate letter codes

fixed. But x,y,z and other placeholder sources still show up as bare letters. I wonder if Alan Weakley should be the ... xianhua liu

04:56 PM Bug #2767: Adjust colors on maps

fixed xianhua liu