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From 08/12/2010 to 09/10/2010

09/09/2010

09:47 PM Bug #5074: Fix the release process so modules can be released from Windows machines.
Fixed by detecting when the OS is Windows and reporting to the user the location to import to manually. The problem w... David Welker
02:02 AM Bug #5125: Add feature to do a one-step revert of a botched update from outside of Kepler
Rollback functionality has now been implemented. David Welker

09/08/2010

04:34 PM Bug #5174: Reduce the number of modules in Kepler CORE.
My theory about the number of modules is that tool developers want
to have many modules because they see all the comb...
Christopher Brooks
04:26 PM Bug #5174 (Resolved): Reduce the number of modules in Kepler CORE.
The number of modules in Kepler is a little bit overwhelming. If the user was required to specify modules.txt manuall... David Welker
04:24 PM Bug #5173 (New): Develop clear criteria for when code in Kepler CORE should be in its own module.
As of now, we have broken up Kepler into a number of modules. But this breaking up of Kepler has been ad hoc and not ... David Welker
04:15 PM Bug #5172 (Resolved): Exceptions are sometimes thrown during sensor workflow run
When running a sensor workflow (importing the localhost sensor simulator site), I will intermittently encounter one o... Sean Riddle
03:25 PM Bug #5157: Devise approach for when patching should occur when changes occur via the module-manager.
I think our current approach is adequate. The assumption is that when a user selects a patch, they are interested in ... David Welker

09/07/2010

09:35 AM Bug #5122: Develop an approval process for patches
What are we doing with respect to this item? Are we going to develop a more formal process? David Welker
09:18 AM Bug #5125: Add feature to do a one-step revert of a botched update from outside of Kepler
This sounds interesting. That there are two different bugs that might be solved by a "rollback" feature makes me wond... David Welker
09:10 AM Bug #5161: can't always use Module Manager to change to an older patch of a suite
This is an interesting point.
The issue is this. If you a suite references ^ at the end, it means, use the latest av...
David Welker

09/05/2010

10:15 PM Bug #5073: In module manager, display the current suite name as well as a fully resolved list of modules.
Done. David Welker

09/03/2010

06:42 PM Bug #5033: Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
Currently, in the WRMM a WRM may be shared among X windows (the identifier i'm using for a window is a tableauFrame).... Derik Barseghian
04:39 PM Bug #5164: Don't show Workflow Run Manager and tag workflow drop-down list on Schedule tab of Workflow Scheduler view
We also don't want to show the "Tag workflow" drop-down list on Schedule tab. We do want it to show on the Server Rep... Jing Tao
12:54 PM Bug #5171 (New): link workflow in components tree to workflow in scheduler view
Once a workflow has been uploaded to a repository, a user might want to schedule it for execution. To make this proce... Daniel Crawl
12:48 PM Bug #5170 (New): uploading a workflow requires a refresh
When a workflow is uploaded to a remote repository, the component tree must be searched again before the workflow app... Daniel Crawl
12:46 PM Bug #5169 (Resolved): select more than one remote repository
The Component Preferences tab only allows a single remote repository to be selected at a time. By selecting more than... Daniel Crawl
12:40 PM Bug #5045: Add a menu to add and configure new remote kepler servers
The workflow scheduler servers in Figs 6 & 7 are the same as the "remote repositories" that can be selected in the ex... Daniel Crawl

09/01/2010

03:15 PM Bug #5168: 'ant change-to' fails at r25610
Fixed. David Welker
09:49 AM Bug #5168 (Resolved): 'ant change-to' fails at r25610
# ant change-to -Dsuite=kepler
Buildfile: build.xml
change-to:
[change-to] Retrieving modules....
[change-to]
...
Daniel Crawl
01:18 AM Bug #5167 (Resolved): Fix bug so that the correct modules.txt is always used.
Now that there are two modules.txt, there are situations where the incorrect modules.txt is sometimes used. David Welker
01:16 AM Bug #5166 (Resolved): Patch Kepler 2.0.0 so that the module manager can switch from Kepler-2.2.0 to Kepler-2.0.0 or Kepler-2.0.1
The issue here are that the significant changes to the build system have changed the way the module manager works. Th... David Welker
01:02 AM Bug #5065: In shared or administrative installations, the ability to store modules.txt and extra modules locally. This way, the module manager will work smoothly on Windows without having to run as an administrator.
I have finally implemented a variation on solution (5). Basically, when a flag is present (.utilize.user.kepler.modul... David Welker

08/31/2010

05:55 PM Bug #4801: out of memory
I changed several hashmap/hashtable/vector variables in some static classes, one static hashmap variable in a normal ... jianwu jianwu
01:16 PM Bug #5045: Add a menu to add and configure new remote kepler servers
I'm going to start working on this, under the assumption we still want a new tab in Preferences where a user can add,... Derik Barseghian

08/30/2010

06:23 PM Bug #5165 (Resolved): implement a GUI Save action for KARs
Currently in the GUI we really only have a 'save as...' type action for saving KARs (currently called "Save Archive (... Derik Barseghian
05:10 PM Bug #5164 (Resolved): Don't show Workflow Run Manager and tag workflow drop-down list on Schedule tab of Workflow Scheduler view
We decided it would be confusing to show the WRM on the Schedule tab of the Workflow Scheduler View, but we do want i... Derik Barseghian

08/27/2010

06:13 PM Bug #5050: Automatically filter workflow run manager runs based on selected workflow
Locally I've added code for doing this, invoked by WorkflowRunManager.programticFilter(Map<String, String>columnsAndF... Derik Barseghian
03:24 PM Bug #4801: out of memory
More analysis shows that one reason for the adding memory is because some singleton classes do not release correspond... jianwu jianwu
02:41 PM Bug #5163 (New): Items of Interest pane in reporting cannot be used when a sensor site is executing
1) Import a SPAN sensor site.
2) Run the site.
3) Go to reporting and try to expand a canvas component to find a le...
Sean Riddle
10:30 AM Bug #5162: Kepler quits with JVM error (no use-case for reproducing error)
What version of Kepler was this error observed under? Was it an installation, or a development checkout? What modules... Sean Riddle
01:49 AM Bug #5162 (New): Kepler quits with JVM error (no use-case for reproducing error)
From time to time, Kepler finishes it's execution (when closed through File-> Exit).
Following error occurs (it mi...
Michal Owsiak

08/26/2010

05:18 PM Bug #4801: out of memory
I uploaded the allocation call tree view at JProfiler after opening a workflow and closing it. Any suggestions on the... jianwu jianwu
04:51 PM Bug #4801: out of memory
Hi Christopher, thanks for your info.
To demonstrate whether the memory increase is because of the kar file opening...
jianwu jianwu
03:24 PM Bug #4801: out of memory
Below is some email about a leak worth looking in to.
--start--
Thanks for pointing this out as this is very timely ...
Christopher Brooks
02:18 PM Bug #4801: out of memory
Madhu and I tried these workflows for a while and found that the memory usage goes up for opening and closing one wor... jianwu jianwu
03:26 PM Bug #5129: adding and removing configuration properties could be made easier
If a new release of a module contains new properties in one of its configuration files, these updates will not appear... Daniel Crawl

08/25/2010

05:03 PM Bug #5099: Import Dependent Modules for KAR doesn't work
Done. Derik Barseghian
04:27 PM Bug #5161 (Resolved): can't always use Module Manager to change to an older patch of a suite
If a module is published
and a patched version of this module is published
and the user has downloaded both
and th...
Derik Barseghian
12:36 PM Bug #5160: problem changing suites using Module Manager
The problem was that Module Manager's AvailableModulesPanel was deleting the new current-suite.txt file, but not rewr... Derik Barseghian
12:22 AM Bug #5160: problem changing suites using Module Manager
I am unable to reproduce this problem. In fact, I was able to change from reporting-2.1.0 to workflow-run-manager-2.1... David Welker

08/24/2010

04:44 PM Bug #5160 (Resolved): problem changing suites using Module Manager
In the test releases area, I've published all 2.1.0 modules.
If I launch kepler (configured to look at the test-are...
Derik Barseghian
12:50 PM Bug #5158: remaining provenance issues for 2.1 release
As requested I've posted a description on the wiki describing these issues:
https://kepler-project.org/developers/int...
Derik Barseghian

08/20/2010

04:24 PM Bug #5157: Devise approach for when patching should occur when changes occur via the module-manager.
I have a solution that is good enough for 2.1. The default is that suites are patched. This default can be changed wi... David Welker
11:28 AM Bug #5157 (Resolved): Devise approach for when patching should occur when changes occur via the module-manager.
Right now, if you change to a suite through the module manager, it is listed as not being patchable. This might be de... David Welker
02:09 PM Bug #5158 (Resolved): remaining provenance issues for 2.1 release
There are some remaining tasks to be done for provenance before we can ship 2.1:
- Dan has some schema changes to pu...
Derik Barseghian
12:23 AM Bug #5143: not getting prompted to upgrade to available patched version in test area
After fixing bug 5147, I have verified that this functionality now works. David Welker
12:08 AM Bug #5147: Resolve issue with modules.txt
I found a way to solve this problem without affecting backwards compatibility. There is new file, called current-suit... David Welker

08/19/2010

05:15 PM Bug #4694: workflow run manager - differentiate imported runs
This is done in the 2.1 branch, imported run-rows now a blueish color. Waiting to merge this and other changes into t... Derik Barseghian
01:57 AM Bug #5156 (Resolved): ant run for kepler 1.0 fails after clean svn checkout
gamma:build-area michalo$ pwd
/Users/michalo/modules.dir/build-area
gamma:build-area michalo$ sw_vers
ProductName...
Michal Owsiak

08/18/2010

06:53 PM Bug #5154: Curiously, no progress indicator shows progress during patching.
Done. David Welker
04:30 PM Bug #4324: ptII/module-info/revision.txt not being updated
Trunks now using ptolemy r58807, and I added the jogl exclude for eclipse.
idea's PtolemyModuleStart already excludes...
Derik Barseghian
03:42 PM Bug #4324: ptII/module-info/revision.txt not being updated
If excluding those from building system, please make sure it's also updated for eclipse building. To update it, just ... jianwu jianwu
03:37 PM Bug #4324: ptII/module-info/revision.txt not being updated
I think the @override warnings are from using Java 1.5.
Adding jogl to the excludes seems reasonable.
data/ontologies...
Christopher Brooks
02:49 PM Bug #4324: ptII/module-info/revision.txt not being updated
I just tried to manually move kepler trunk up to ptolemy head, but I can't compile:
[compile] /Users/derik/dev2/kep...
Derik Barseghian
03:53 PM Bug #5155 (New): To exclude a file or directory requires updating at least four places, only one should be necessary
jianwu <jianwu@sdsc.edu> writes:
>If excluding those from building system, please make sure it's also updated for
...
Christopher Brooks
01:12 PM Bug #5153: Save As... closes all windows associated with a workflow
This happens because ExportArchiveAction's refreshFrameAfterSave is set to true by default. The commit log for this f... Derik Barseghian
01:07 PM Bug #5145: kepler library skin is mostly broken
Jing's done this, we just need to wait for the kepler library metacat to be upgraded to change this to an ER and reta... Derik Barseghian
12:09 PM Bug #5099: Import Dependent Modules for KAR doesn't work
This is implemented now, it just needs further testing once bugs #5147 and #5143 are fixed.
As part of this I've rem...
Derik Barseghian

08/17/2010

11:13 PM Bug #5154 (Resolved): Curiously, no progress indicator shows progress during patching.
Although I seem to recall a progress indicator being existent for large patches previously, it seems to have disappea... David Welker
11:10 PM Bug #5143: not getting prompted to upgrade to available patched version in test area
I have finally figured out the source of this problem. This bug is intimately related to 5147. Basically, the reason ... David Welker
11:04 AM Bug #5153 (New): Save As... closes all windows associated with a workflow
If you're working on a complex workflow, it's not uncommon to have multiple windows open for the one workflow -- wind... Derik Barseghian

08/16/2010

04:45 PM Bug #5152: Errors when saving more than one actors in a kar.
One difference between this situation and CoreActors.kar is that there may be dependencies among actors here, whereas... jianwu jianwu
04:22 PM Bug #5152: Errors when saving more than one actors in a kar.
Disabling the option when multiple actors are selected would be an improvement since it's not working, but being able... Derik Barseghian
04:13 PM Bug #5152 (New): Errors when saving more than one actors in a kar.
To re-produce,
1) drag and drop two actors into canvas, such as 'Display' and 'Constant'
2) choose these two act...
jianwu jianwu
04:29 PM Bug #5151: kar files are not openable if they are generated from actors.
Note that you can also right-click on the canvas and Save Archive (KAR)... and this is the same as File => Save Archi... Derik Barseghian
04:00 PM Bug #5151 (New): kar files are not openable if they are generated from actors.
By right clicking an actor and choosing 'Save Archive (KAR)...', I can save an actor as a kar. The kar will be access... jianwu jianwu
03:31 PM Bug #5150 (New): errors to save an actor as kar if its name has forward slash ('/').
To produce it:
1, drag and drop 'Display' actor into canvas.
2, rename it's name to be '/Display'.
3, right click ...
jianwu jianwu
03:10 PM Bug #5149 (New): kar file saving problems.
I think there are more than one problems for kar file saving, this bug is to track concrete kar file saving problems.... jianwu jianwu
11:55 AM Bug #5142: comma improperly inserted in kar filename rather than a period (.)
Ben, thanks for your info which is very valuable. I'll switch from finding where it becomes ',kar' to how to display ... jianwu jianwu
11:39 AM Bug #5142: comma improperly inserted in kar filename rather than a period (.)
I believe the comma is used intentionally since you cannot use a period/dot in the name of a NamedObj. i don't think ... ben leinfelder
10:46 AM Bug #5142: comma improperly inserted in kar filename rather than a period (.)
After digging a while, I found it is because those kar files are saved with ',kar'. When the Kepler is started, you c... jianwu jianwu
09:09 AM Bug #5148 (New): Remove println from XSLTActor
From Chris:
----------
When you send a string to the XSLTActor it prints the xml document to the terminal.
Could y...
ben leinfelder

08/13/2010

08:28 PM Bug #5095: test kepler and wrp for memory leaks
Ben, cool. Thanks. jianwu jianwu
08:25 PM Bug #5095: test kepler and wrp for memory leaks
The data referenced on DEV is there - I was mistaken earlier about it being missing.
http://dev.nceas.ucsb.edu/knb/me...
ben leinfelder
06:48 PM Bug #5095: test kepler and wrp for memory leaks
We will get your 'jianwu' account (o=SDSC) set up so that you can read the data used in those workflows. Please don't... ben leinfelder
06:44 PM Bug #5095: test kepler and wrp for memory leaks
ben, I think it is for provenance since my current tests are just normal workflows, not those TPC workflows.
Thanks...
jianwu jianwu
06:18 PM Bug #5095: test kepler and wrp for memory leaks
Jianwu,
WHen you say hsqldb - is that for provenance, data, or both? I think one of the things the TPC workflows exer...
ben leinfelder
05:11 PM Bug #5095: test kepler and wrp for memory leaks
After digging a while using JConsole and Eclipse MAT plugin, I didn't found obvious memory leaks. As expected, hsqldb... jianwu jianwu

08/12/2010

04:10 PM Bug #5145: kepler library skin is mostly broken
The interface and the search query back end needs to allow more sophisticated queries than just search, e.g., ability... Ilkay Altintas
04:04 PM Bug #5145: kepler library skin is mostly broken
Those pictures looks great. Thank matt for the information. However, our goal is very simpler - it can display the in... Jing Tao
03:18 PM Bug #5145: kepler library skin is mostly broken
If you are in the process of revamping this stylesheet and presentation, its probably worthwhile to also consider imp... Matt Jones
02:46 PM Bug #5145: kepler library skin is mostly broken
Here are result discuss with ben:
The detail display of kar file will be:
Kar file name (download)
Workflow name 1 ...
Jing Tao
11:35 AM Bug #5145: kepler library skin is mostly broken
For the display details page I'd imagine just looping through each karEntry and displaying it's information:
-name*
-...
ben leinfelder
11:13 AM Bug #5145: kepler library skin is mostly broken
Here is the summary during our discussion (derik, ben and I):
1: Remove the broken image link
2. Add a section to di...
Jing Tao
03:55 PM Bug #5119: Make switching to a specific set of modules turn off automatic update feature
Thanks David, I'm now using this feature in 2.1 -- when a user with KARCompliance set to Strict restarts for a KAR re... Derik Barseghian
01:40 PM Bug #5147 (Resolved): Resolve issue with modules.txt
Automatic suite resolution has some issues with regard to patching. For example, if reporting-2.1.0 contains a self-r... David Welker
12:11 PM Bug #5137: database exception when using 'ant run' at windows 7.
I can not reproduce the error after a fresh checkout. It's weird that the exception was still there even I did 'ant u... jianwu jianwu
12:11 PM Bug #5140: Ecogrid Authentication Error at Kepler trunk on windows 7.
I can not reproduce the error after a fresh checkout. It's weird that the exception was still there even I did 'ant u... jianwu jianwu
 

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