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From 08/24/2010 to 09/22/2010

09/23/2010

05:33 PM Bug #5183: Fix 6-WebServicesAndDataTransformation.xml
update: thanks to derik's suggestion, the changes are moved to outreach-2.1 and the outreach-2.0 is reverted back. So... jianwu jianwu

09/22/2010

03:09 PM Bug #5095: test kepler and wrp for memory leaks
as discussed with derik, one leak exists in org.kepler.workflowrunmanager.WorkflowRunManagerManager class and the cla... jianwu jianwu
05:59 PM Bug #5095: test kepler and wrp for memory leaks
To verify the changes, you can look for the instance number of ptolemy.gui.Top after opening and closing workflows. T... jianwu jianwu
05:54 PM Bug #5095: test kepler and wrp for memory leaks
Which changes in kepler trunk r25888 and ptolemy trunk r59134, mainly switching to Weak References in singleton class... jianwu jianwu
08:56 AM Bug #5189: When File -> Exit is choosen Kepler closes all workflows without warning
Personally, I prefer applications that actually exit when I select exit. :-)
However, I see the point here.
The enh...
Christopher Brooks
02:21 AM Bug #5189 (New): When File -> Exit is choosen Kepler closes all workflows without warning
This issue is related to multiple workflows execution. In order to reproduce it do as follows:
1. Open Kepler
2. ...
Michal Owsiak

09/21/2010

03:41 PM Bug #5183: Fix 6-WebServicesAndDataTransformation.xml
It is fixed at r25791 at 2.1 branch and r25792 at trunk. The solution is changing Webservice operation to another one... jianwu jianwu
03:34 PM Bug #5188: closing workflow does not save the location change of popup display windows.
In the newest Kepler menu setting http://mercury.nceas.ucsb.edu/kepler/pipermail/kepler-dev/2010-September/018920.htm... jianwu jianwu
03:16 PM Bug #5188 (Resolved): closing workflow does not save the location change of popup display windows.
To find the differences:
1) create a test workflow with display actors
2a) save the workflow as a kar
2b) save the...
jianwu jianwu
08:14 AM Bug #5179: determine if ptolemy 8.0.0 is the desired version for kepler 2.1.0 release
These changes are present in the 8.0 beta release branch, but
not present in r58234, which is what is in the Kepler p...
Christopher Brooks
10:04 PM Bug #5179: determine if ptolemy 8.0.0 is the desired version for kepler 2.1.0 release
There are quite a few other memory leaks in Kepler and reporting suite (not in Ptolemy). My target is to fix them in ... jianwu jianwu
06:47 PM Bug #5179: determine if ptolemy 8.0.0 is the desired version for kepler 2.1.0 release
Jianwu's made a few memory fixes already, but I believe he said he only wants to include them in 2.1 once he's done w... Derik Barseghian
06:17 PM Bug #5179: determine if ptolemy 8.0.0 is the desired version for kepler 2.1.0 release
Here's one change that should possibly go in to Kepler 2.1:
Jianwu's memory leak fix to
ptolemy.vergil.tree.EntityTr...
Christopher Brooks
11:18 PM Bug #5084: Allow test releases in the same location as actual releases.
I have added new functionality to the module manager and the build to allow test release to be hidden by default, but... David Welker
07:02 PM Bug #5165: implement a GUI Save action for KARs
Should be done in r25783, just needs more testing. Derik Barseghian

09/18/2010

06:14 PM Bug #5187 (New): GUI should make apparent unsaved changes
When you modify a document in most applications, on Mac, the red close button changes to have a dot in its center, de... Derik Barseghian

09/17/2010

05:29 PM Bug #5180: Add a new Export File menu option that does a Save As (model xml)
Done. You need to delete KeplerData/modules/gui/configuration/uiMenuMappings_en_US.xml if you have one. I believe tag... Derik Barseghian
05:10 PM Bug #5186: Publish example KARs to repository
Removed the 2 kars.
Changing title, we just need to publish example kars now.
Derik Barseghian

09/16/2010

04:53 PM Bug #5185: common ontology_catalog.xml get modified
Here's an example of a modified common-2.1/configs/ptolemy/configs/kepler/ontologies/ontology_catalog.xml
<?xml vers...
Derik Barseghian
02:01 PM Bug #5185 (Resolved): common ontology_catalog.xml get modified
Sometimes kepler modifies ontology_catalog.xml file in the common module. This shouldn't happen. Derik Barseghian
04:39 PM Bug #5184: sanity check(s) when attempting to open owl file
As requested, stack trace:
[run] Ran additional initialization for module reporting from class org.kepler.module.re...
Derik Barseghian
01:59 PM Bug #5184 (Resolved): sanity check(s) when attempting to open owl file
Intermittently on startup I get an error dialog, where tagging (or something) attempts to open an ontology file from ... Derik Barseghian
02:55 PM Bug #5158: remaining provenance issues for 2.1 release
Retargeting, Dan did what needed doing for 2.1. Derik Barseghian
02:10 PM Bug #5186 (Resolved): Publish example KARs to repository
The two KARs on the kepler library were published inadvertently, and may and should be removed, because they are not ... Derik Barseghian
01:52 PM Bug #5183 (Resolved): Fix 6-WebServicesAndDataTransformation.xml
This work isn't working. Jianwu reports it's because a web service is down. We should fix or remove this getting-star... Derik Barseghian
01:46 PM Bug #5182 (Resolved): documentation needs updating for 2.1
All the docs need reading and updating for 2.1.
Screenshots showing the old File menu will have to be updated when i...
Derik Barseghian
01:42 PM Bug #5181 (Resolved): welcome window shows wrong version number
Christopher reports the welcome window shows the wrong version number in 2.1. Derik Barseghian
01:35 PM Bug #5180 (Resolved): Add a new Export File menu option that does a Save As (model xml)
After discussion with Christopher: add a File menu Export option that does what the old Save As used to do, a save as... Derik Barseghian
01:31 PM Bug #5179 (Resolved): determine if ptolemy 8.0.0 is the desired version for kepler 2.1.0 release
Christopher wants to check if there have been any critical fixes in ptolemy since kepler 2.0.0 was released, to see i... Derik Barseghian
01:27 PM Bug #5178 (Resolved): Documentation links are broken in help doc-index.html
Beneath Help=> Kepler Documentation
the documentation links in the Local Copy column are broken in the 2.1 release.
Derik Barseghian
01:20 PM Bug #5165: implement a GUI Save action for KARs
Retargeting to 2.1 after discussion w/ Christopher. Derik Barseghian
11:57 PM Bug #5161: can't always use Module Manager to change to an older patch of a suite
I have actually decided to address this problem with a new feature. Now the user, in addition to selecting a particul... David Welker
05:46 PM Bug #5145: kepler library skin is mostly broken
The new kepler library server is up and the bug was closed. We also open a new bug 5177 for the enhancement of workfo... Jing Tao
05:43 PM Bug #5177 (New): Enhance displaying workflow in kepler server library skin
This bug is the secondary stag of bug 5145.
Here are from matt:
If you are in the process of revamping this sty...
Jing Tao

09/15/2010

11:15 AM Bug #5146: modifying and saving the composite sinewave actor fails
I played with Sinewave actor and noticed exactly same behavior as described. When I tried to change annotation, chang... Madhusudan Gujral

09/13/2010

12:14 PM Bug #5175 (New): Fix remaining issues with exporting multiple runs into one KAR
In 2.1, opening a KAR that contains two workflows and report layouts won't necessarily open the report layouts.
T...
Derik Barseghian

09/10/2010

09:47 PM Bug #5074: Fix the release process so modules can be released from Windows machines.
Fixed by detecting when the OS is Windows and reporting to the user the location to import to manually. The problem w... David Welker

09/09/2010

02:02 AM Bug #5125: Add feature to do a one-step revert of a botched update from outside of Kepler
Rollback functionality has now been implemented. David Welker

09/08/2010

04:34 PM Bug #5174: Reduce the number of modules in Kepler CORE.
My theory about the number of modules is that tool developers want
to have many modules because they see all the comb...
Christopher Brooks
04:26 PM Bug #5174 (Resolved): Reduce the number of modules in Kepler CORE.
The number of modules in Kepler is a little bit overwhelming. If the user was required to specify modules.txt manuall... David Welker
04:24 PM Bug #5173 (New): Develop clear criteria for when code in Kepler CORE should be in its own module.
As of now, we have broken up Kepler into a number of modules. But this breaking up of Kepler has been ad hoc and not ... David Welker
04:15 PM Bug #5172 (Resolved): Exceptions are sometimes thrown during sensor workflow run
When running a sensor workflow (importing the localhost sensor simulator site), I will intermittently encounter one o... Sean Riddle
03:25 PM Bug #5157: Devise approach for when patching should occur when changes occur via the module-manager.
I think our current approach is adequate. The assumption is that when a user selects a patch, they are interested in ... David Welker

09/07/2010

09:35 AM Bug #5122: Develop an approval process for patches
What are we doing with respect to this item? Are we going to develop a more formal process? David Welker
09:18 AM Bug #5125: Add feature to do a one-step revert of a botched update from outside of Kepler
This sounds interesting. That there are two different bugs that might be solved by a "rollback" feature makes me wond... David Welker
09:10 AM Bug #5161: can't always use Module Manager to change to an older patch of a suite
This is an interesting point.
The issue is this. If you a suite references ^ at the end, it means, use the latest av...
David Welker

09/06/2010

10:15 PM Bug #5073: In module manager, display the current suite name as well as a fully resolved list of modules.
Done. David Welker

09/04/2010

06:42 PM Bug #5033: Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
Currently, in the WRMM a WRM may be shared among X windows (the identifier i'm using for a window is a tableauFrame).... Derik Barseghian

09/03/2010

04:39 PM Bug #5164: Don't show Workflow Run Manager and tag workflow drop-down list on Schedule tab of Workflow Scheduler view
We also don't want to show the "Tag workflow" drop-down list on Schedule tab. We do want it to show on the Server Rep... Jing Tao
12:54 PM Bug #5171 (New): link workflow in components tree to workflow in scheduler view
Once a workflow has been uploaded to a repository, a user might want to schedule it for execution. To make this proce... Daniel Crawl
12:48 PM Bug #5170 (New): uploading a workflow requires a refresh
When a workflow is uploaded to a remote repository, the component tree must be searched again before the workflow app... Daniel Crawl
12:46 PM Bug #5169 (Resolved): select more than one remote repository
The Component Preferences tab only allows a single remote repository to be selected at a time. By selecting more than... Daniel Crawl
12:40 PM Bug #5045: Add a menu to add and configure new remote kepler servers
The workflow scheduler servers in Figs 6 & 7 are the same as the "remote repositories" that can be selected in the ex... Daniel Crawl

09/01/2010

03:15 PM Bug #5168: 'ant change-to' fails at r25610
Fixed. David Welker
09:49 AM Bug #5168 (Resolved): 'ant change-to' fails at r25610
# ant change-to -Dsuite=kepler
Buildfile: build.xml
change-to:
[change-to] Retrieving modules....
[change-to]
...
Daniel Crawl
01:18 AM Bug #5167 (Resolved): Fix bug so that the correct modules.txt is always used.
Now that there are two modules.txt, there are situations where the incorrect modules.txt is sometimes used. David Welker
01:16 AM Bug #5166 (Resolved): Patch Kepler 2.0.0 so that the module manager can switch from Kepler-2.2.0 to Kepler-2.0.0 or Kepler-2.0.1
The issue here are that the significant changes to the build system have changed the way the module manager works. Th... David Welker
01:02 AM Bug #5065: In shared or administrative installations, the ability to store modules.txt and extra modules locally. This way, the module manager will work smoothly on Windows without having to run as an administrator.
I have finally implemented a variation on solution (5). Basically, when a flag is present (.utilize.user.kepler.modul... David Welker
05:55 PM Bug #4801: out of memory
I changed several hashmap/hashtable/vector variables in some static classes, one static hashmap variable in a normal ... jianwu jianwu

08/31/2010

01:16 PM Bug #5045: Add a menu to add and configure new remote kepler servers
I'm going to start working on this, under the assumption we still want a new tab in Preferences where a user can add,... Derik Barseghian
06:23 PM Bug #5165 (Resolved): implement a GUI Save action for KARs
Currently in the GUI we really only have a 'save as...' type action for saving KARs (currently called "Save Archive (... Derik Barseghian
05:10 PM Bug #5164 (Resolved): Don't show Workflow Run Manager and tag workflow drop-down list on Schedule tab of Workflow Scheduler view
We decided it would be confusing to show the WRM on the Schedule tab of the Workflow Scheduler View, but we do want i... Derik Barseghian

08/28/2010

06:13 PM Bug #5050: Automatically filter workflow run manager runs based on selected workflow
Locally I've added code for doing this, invoked by WorkflowRunManager.programticFilter(Map<String, String>columnsAndF... Derik Barseghian

08/27/2010

03:24 PM Bug #4801: out of memory
More analysis shows that one reason for the adding memory is because some singleton classes do not release correspond... jianwu jianwu
05:18 PM Bug #4801: out of memory
I uploaded the allocation call tree view at JProfiler after opening a workflow and closing it. Any suggestions on the... jianwu jianwu
02:41 PM Bug #5163 (New): Items of Interest pane in reporting cannot be used when a sensor site is executing
1) Import a SPAN sensor site.
2) Run the site.
3) Go to reporting and try to expand a canvas component to find a le...
Sean Riddle
10:30 AM Bug #5162: Kepler quits with JVM error (no use-case for reproducing error)
What version of Kepler was this error observed under? Was it an installation, or a development checkout? What modules... Sean Riddle
01:49 AM Bug #5162 (New): Kepler quits with JVM error (no use-case for reproducing error)
From time to time, Kepler finishes it's execution (when closed through File-> Exit).
Following error occurs (it mi...
Michal Owsiak

08/26/2010

04:51 PM Bug #4801: out of memory
Hi Christopher, thanks for your info.
To demonstrate whether the memory increase is because of the kar file opening...
jianwu jianwu
03:24 PM Bug #4801: out of memory
Below is some email about a leak worth looking in to.
--start--
Thanks for pointing this out as this is very timely ...
Christopher Brooks
02:18 PM Bug #4801: out of memory
Madhu and I tried these workflows for a while and found that the memory usage goes up for opening and closing one wor... jianwu jianwu
03:26 PM Bug #5129: adding and removing configuration properties could be made easier
If a new release of a module contains new properties in one of its configuration files, these updates will not appear... Daniel Crawl
05:03 PM Bug #5099: Import Dependent Modules for KAR doesn't work
Done. Derik Barseghian

08/25/2010

04:27 PM Bug #5161 (Resolved): can't always use Module Manager to change to an older patch of a suite
If a module is published
and a patched version of this module is published
and the user has downloaded both
and th...
Derik Barseghian
12:36 PM Bug #5160: problem changing suites using Module Manager
The problem was that Module Manager's AvailableModulesPanel was deleting the new current-suite.txt file, but not rewr... Derik Barseghian
12:22 AM Bug #5160: problem changing suites using Module Manager
I am unable to reproduce this problem. In fact, I was able to change from reporting-2.1.0 to workflow-run-manager-2.1... David Welker

08/24/2010

04:44 PM Bug #5160 (Resolved): problem changing suites using Module Manager
In the test releases area, I've published all 2.1.0 modules.
If I launch kepler (configured to look at the test-are...
Derik Barseghian
12:50 PM Bug #5158: remaining provenance issues for 2.1 release
As requested I've posted a description on the wiki describing these issues:
https://kepler-project.org/developers/int...
Derik Barseghian
 

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