Activity
From 05/19/2010 to 06/17/2010
06/17/2010
- 12:55 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- Postponing to sometime post 2.0. This does not affect the correct execution of the workflows.
- 12:53 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- So to sum up: Short of patching the ImageJ code, I'm not sure how to fix this. From my understanding the problem is j...
- 12:40 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I downloaded and tried w/ a newer ij,jar, 1.43u, but no luck, C:\Program Files\Kepler-2.0-RC5\ is still the path used...
- 11:54 AM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I'm able to replicate this on XP. It looks like IJ_Prefs.txt gets written to the project dir (C:\Program Files\Kepler...
- 11:41 AM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- This seems relevant:
http://imagej.588099.n2.nabble.com/Error-when-closing-ImageJ-td3004156.html
06/16/2010
- 05:38 PM Bug #5052 (Resolved): default file open directory of Kepler 2.0
- If I remember correctly, the default directory for 'File-->Open File...' menu item is getting-started directory in Ke...
- 05:19 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I still saw it in RC 5. Re-open it.
In my Windows 7 64 bit machine, the failure does *not* occur if
I start Kepler u... - 02:21 PM Bug #5051: Semantically annotate during Save Archive a workflow with remote data set Error
- This is the trace. Note also warning at top about cloning:
trying to clone myworkflow but you can't clone this objec... - 01:48 PM Bug #5051 (Resolved): Semantically annotate during Save Archive a workflow with remote data set Error
- If you search for a remote data set, drag it out to canvas, then Save Archive, and then Semantically Annotate the wor...
- 09:22 AM Bug #5024: Uninstaller couldn't delete the rc3 folder on windows 7
- This should be fixed.
- 09:20 AM Bug #5008: Research Copyrights before 2.0.0 release.
- Finished.
06/15/2010
- 05:59 PM Bug #5032: Workflow Run Manager - ability to connect to different prov stores from gui actions
- I've got report layouts and instances displaying now when a workflow run manager is connected to a remote provenance ...
- 05:59 PM Bug #5050 (Resolved): Automatically filter workflow run manager runs based on selected workflow
- In Figure 6 ( https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plan...
- 05:54 PM Bug #5049 (Resolved): Prompt for credentials when connecting to remote kepler server
- At some point in Figure 6( https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineer...
06/14/2010
- 02:57 PM Bug #5048 (In Progress): Can't clean (or do other build system operations) offline
- When I try to run "ant clean" from the sensor-view suite, I get the exception below. The module kepler-2.0.^ is not r...
- 01:39 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- (In reply to comment #13)
> (In reply to comment #12)
> > (In reply to comment #11)
> > > Sounds good. Can you poke a... - 01:12 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- (In reply to comment #12)
> (In reply to comment #11)
> > Sounds good. Can you poke around looking for any other simi... - 12:21 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- (In reply to comment #11)
> Sounds good. Can you poke around looking for any other similar problems -- e.g.
> what ha...
06/11/2010
- 04:26 PM Bug #5042: create span simulator
- The simulator now generates data for each sensor, and you can control the sampling parameters.
- 11:33 AM Bug #5047: Rename the tagging docs tagging.pdf
- I don't think kepler-tagging-ui.pdf is the documentation. I think it's some early design documents. They should proba...
- 11:29 AM Bug #5047 (Resolved): Rename the tagging docs tagging.pdf
- The tagging docs (tagging-2.0 > docs) need to be named tagging.pdf instead of kepler-tagging-ui.pdf
This is so tha... - 10:53 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- Fixed Now.
06/10/2010
- 05:36 PM Bug #5032: Workflow Run Manager - ability to connect to different prov stores from gui actions
- Making a little progress on this bug. As a test I've added a temporary jbutton to the WRM that connects to provenance...
- 05:19 PM Bug #5033: Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
- I've made some progress on this bug, I've created a WorkflowRunManagerManager (could use a rename) to manage the now ...
- 03:03 PM Bug #5031: Fail to switch to other suite from module manager of Kepler-2.0-RC3
- It looks like this is working in RC4 on Lei's machine under Windows Vista too. The origins of this problem remain unk...
06/09/2010
- 06:11 PM Bug #5031: Fail to switch to other suite from module manager of Kepler-2.0-RC3
- David, I went to test this on RC4 w/ Vista but the only suite listed at the moment under Available Suites: is kepler-...
- 03:22 PM Bug #5042: create span simulator
- I've implemented part of the simulator. You can start it by running 'ant spansim' in sensor-view/.
Yet to do:
* dat... - 01:38 PM Bug #4997: SEEK/garpModel_ImageJ.xml has an exception while opening
- Closing. Workflows moved to unsupported.
- 01:10 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- Sounds good. Can you poke around looking for any other similar problems -- e.g. what happens when you have multiple c...
- 01:01 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- (In reply to comment #9)
> (In reply to comment #8)
> > Yes, it's not sufficient because scenarios like comment#6 are... - 12:38 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- (In reply to comment #8)
> Yes, it's not sufficient because scenarios like comment#6 are still possible.
>
> I think... - 11:33 AM Bug #5045 (In Progress): Add a menu to add and configure new remote kepler servers
- Figure 6 (https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plans ) ...
06/08/2010
- 05:25 PM Bug #5044: Can't insert null record using Database Writer actor
- Corinna reports this works for her mysql DB too. Closing.
- 01:40 PM Bug #5044: Can't insert null record using Database Writer actor
- Should be fixed in trunk at r24764.
If token is nil, now inserting null into DB. I've (only) tested this with a loca... - 11:37 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- (In reply to comment #4)
> (In reply to comment #3)
> > I've retried with a fresh checkout of 2.0 and the menu item i... - 11:06 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- (In reply to comment #3)
> I've retried with a fresh checkout of 2.0 and the menu item is missing. I also
> retried a... - 10:48 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- I've retried with a fresh checkout of 2.0 and the menu item is missing. I also retried after deleting KeplerData and ...
- 10:32 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- I just checked rc4 and the moudles documentation menu item is available as expected in it as well.
- 10:11 AM Bug #5043: Help => Modules Documentation menu not in 2.0
- Derik, are you talking about release candidate 4 or are you talking about what is currently in svn in kepler/releases...
- 10:57 AM Bug #5017: ReportLayout LSID and referral list should be maintained
- Yes, it's not sufficient because scenarios like comment#6 are still possible.
I think the best approach is to roll t...
06/07/2010
- 05:33 PM Bug #5044 (Resolved): Can't insert null record using Database Writer actor
- User reports being unable to insert null record into database using Database Writer's input port -- I don't believe t...
- 05:20 PM Bug #5043 (Resolved): Help => Modules Documentation menu not in 2.0
- Under the 2.0 branch and RC4, I don't see the Modules Documentation menu item. This menu item exists on trunk. I trie...
- 04:36 PM Bug #5042 (Resolved): create span simulator
- Create a SPAN simulator that uses the SPAN control protocol to start/stop sensors, and change sampling rates. Additio...
- 04:31 PM Bug #5041 (Resolved): display recent data next to icon
- Display the most recent data value and timestamp next to each sensor icon while "running" an engineering view workflow.
- 04:15 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- So, just to be sure that I am understanding you correctly -- are you saying that using the ReportLayoutKAREntryHandle...
- 03:42 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- Hey Debi, while it may be ok to only increment the LSID whenever a report layout is saved, one of the ways a report l...
- 02:50 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- The report layout LSID is now incremented whenever the user saves a KAR file, but only if it is in the local namespac...
- 03:59 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- The files had been moved in 2.0 but not trunk. I moved the ones in trunk.
- 01:43 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Why was this closed? From what I can tell Help => Modules Documentation is still broken because the files haven't bee...
- 02:51 PM Bug #4981: RIO pdfs don't show up in the Component Library
- Re-targeting for now, based on our discussion during the REAP meeting today.
- 12:35 PM Bug #4544: Enter key in Report Designer title invokes a search
- This shouldn't be that hard to fix. It actually sounds like the search field is being greedy. Can the KeyEventListene...
- 12:29 PM Bug #4544: Enter key in Report Designer title invokes a search
- No need to change anything on this bug IMO, it was filed with Importance 'minor' and targeted for 2.X.Y.
- 12:23 PM Bug #4544: Enter key in Report Designer title invokes a search
- I have looked at this again, and following the steps you describe, I can see this in the GUI. However, I don't think...
- 11:56 AM Bug #4544: Enter key in Report Designer title invokes a search
- This still happens for me on trunk, on mac and windows. A way to replicate that shows in the gui:
Type sdf into the S... - 06:59 AM Bug #4544: Enter key in Report Designer title invokes a search
- This is no longer happening for me.
- 12:16 PM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- Closing this for now, although with the disclaimer that there still may be some small changes or additions.
- 09:08 AM Bug #4524: no prompt to save a changed report
- Figured out what is happening here. Ptolemy > gui > Top _queryForSave method is being used instead of the ReportDes...
- 08:49 AM Bug #5009: Opening two KARS that have the same Workflow, but that have different report layouts, will make the first layout refresh itself with the layout from the KAR that was opened most recently.
- Based on Deriks comments, re-targeting to wrp-2.x.y for now.
- 08:18 AM Bug #4324: ptII/module-info/revision.txt not being updated
- ptolemy/revisions.txt is not being automatically updated so I'm reopening this.
From the svn logs, it looks like the... - 07:09 AM Bug #4660: Clicking in a section header highlights all the text.
- Fixed.
- 07:08 AM Bug #4548: string tokens with newlines print the escape sequences
- Re-targeting for post 2.0.
- 07:06 AM Bug #4526: multi-line entries can be put into text items in reports, but they are displayed on a single line
- This is desired behavior, as we do not want to assume that the user would like a new line whenever the text wraps in ...
06/04/2010
- 03:49 PM Bug #4741: create icons for engineering view components
- also need a different color/icon to represent sending commands to SPAN
- 03:45 PM Bug #5040: create views, tabs, configuration
- done
06/03/2010
- 06:22 PM Bug #5040: create views, tabs, configuration
- I've created stub tabs and the configuration.xml.
Yet to do:
set the canvas name to be "Site Layout" instead of "Wo... - 01:14 PM Bug #5040 (Resolved): create views, tabs, configuration
- The view and tab panes for the engineering view need to be created (for now, they can be empty), along with a configu...
- 01:20 PM Bug #4754: update metacat workflow execution scheduler
- Hi Jing,
This sounds great. Do you want to create a new kepler module for the client jar and scheduler gui (bug 4753...
06/02/2010
- 01:12 PM Bug #4997: SEEK/garpModel_ImageJ.xml has an exception while opening
- I am moving this workflow and all similar workflows that do not work into an unsupported directory. It will be up to ...
- 01:11 PM Bug #5031: Fail to switch to other suite from module manager of Kepler-2.0-RC3
- We will look more at this bug after release candidate 4.
- 01:10 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Closing this bug. We may need to re-open this bug or a new bug in order to deal with the change in location of docume...
- 12:05 PM Bug #4754: update metacat workflow execution scheduler
- The workflow execution scheduler was separated from metacat. Now it stays at https://code.ecoinformatics.org/code/wfs...
- 11:00 AM Bug #5016: mirror dataturbine via command line
- I've created a program to do this: util.MirrorDT.
06/01/2010
- 02:11 PM Bug #4762: create gui to control sensor from kepler
- For now, use the existing actor configuration dialog to control components.
If this is not sufficient, we can design... - 02:10 PM Bug #4743: create gui to edit documentation metadata for component
- For now, use the existing actor configuration dialog to edit or add metadata for components.
If this is not sufficie... - 01:10 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Typo in Comment#4, the new properties are not <modulename>.demodir, but <modulename>.workflowdir.
I've updated all t... - 10:48 AM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- (In reply to comment #5)
> Changing the "documentation" folder to "docs." Also, putting it at the top
> level of a mo... - 11:18 AM Bug #4983: cannot run kepler.sh in RC2
- Thanks for taking a look at this.
One issue is that by changing directories to the script directory,
starting java an... - 11:08 AM Bug #4983: cannot run kepler.sh in RC2
- Okay, patched in branch as well.
- 11:05 AM Bug #4983: cannot run kepler.sh in RC2
- Yes, build instructions point to: https://code.kepler-project.org/code/kepler/releases/release-branches/build-area-2.0/
- 10:59 AM Bug #4983: cannot run kepler.sh in RC2
- Fixed in r24623 in trunk build-area (script works from any directory on a Mac). Is there a separate 2.0 build-area th...
05/30/2010
- 01:15 AM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Changing the "documentation" folder to "docs." Also, putting it at the top level of a module, rather than within the ...
05/28/2010
- 08:51 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- This is mostly done now in trunk and 2.0.
After futher discussion w/ David and Sean, we decided to change to copy al... - 03:39 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Not mentioned in the bug but the idea was to copy all modules' module/resources/demos dirs. But we've changed the pla...
- 02:40 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Oh, I nearly forgot. We need a docs directory to.
(3) For each module in the current set:
-- Check if there is a doc... - 01:28 PM Bug #5034: Need to generalize copying workflow demos from areas other than outreach.
- Proposed solution:
(1) For each module in the current set:
-- Check if there is a demo directory. (This should be de... - 03:22 PM Bug #5028: dataturbine overwrites recent data when frequently detaching
- This has been fixed in DT V3.2B4.
- 12:17 PM Bug #4983: cannot run kepler.sh in RC2
- I have a script that works for kepler.sh. I haven't integrated it into the startup-script target yet, though. It's at...
- 11:30 AM Bug #5036 (New): All workflows that do not work should be moved.
- I am moving all workflows that do not work to an unsupported directory so that people are not surprised when they try...
- 10:54 AM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- Fixed.
- 08:35 AM Bug #5022: 2.0-RC3 Windows installer creates Kepler 2.0-RC2 start menu choice, not Kepler 2.0-RC3
- Fixed. The icon is now showing up properly
05/27/2010
- 09:39 PM Bug #5034 (Resolved): Need to generalize copying workflow demos from areas other than outreach.
- Lei Dou at UC Davis is working on a module that extends Kepler functionality. It, like many other modules, has workfl...
- 09:31 PM Bug #5031: Fail to switch to other suite from module manager of Kepler-2.0-RC3
- This is an important bug that should block the release.
- 11:40 AM Bug #5031 (Resolved): Fail to switch to other suite from module manager of Kepler-2.0-RC3
- In the newly installed Kepler-2.0-RC3 on windows vista, I want to switch to comad-exp-1.0.0 suite from the default ke...
- 02:14 PM Bug #5030: RExpression2 actor will fail if the libs are not found
- I've tried to run/install JRI on a 64 bit windows machine.
The JRI examples that they ship seem to work and I can get... - 12:54 PM Bug #4755: update workflow run manager and reporting to display runs of sensor workflows
- Two subtasks of this bug are:
1) WRM must be able to dynamically connect to and show runs in remote provenance stores... - 12:50 PM Bug #5033 (Resolved): Workflow Run Manager - Allow multiple instances of WRM in one Kepler instance
- As Figure 6 implies, each Kepler window has a WRM that may be showing run results on a different server:
https://kep... - 12:46 PM Bug #5032 (Resolved): Workflow Run Manager - ability to connect to different prov stores from gui actions
- WRM must be able to dynamically connect to and show runs in remote provenance stores based on what a user has clicked...
05/26/2010
- 03:08 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- i'll try to make 64 bit libs for JRI
- 02:16 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- Fixed the 2 workflows, and tested on 2.0 and trunk on mac, and 2.0 on XP, and they work. I'm going to move the concer...
- 02:12 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- (In reply to comment #5)
> (In reply to comment #1)
>
> 2. The RExpression2 (JRI-based) actor will fail if the libs ... - 01:51 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- (In reply to comment #1)
1. Derik will change the workflows to point to the DEMODIR path.
2. The RExpression2 (JRI-... - 02:41 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- (In reply to comment #10)
> (In reply to comment #9)
> > (In reply to comment #8)
> > > (In reply to comment #7)
> > ... - 12:39 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- I agree that we should close this bug. I am gong to do so, but if anyone has any objections, feel free to re-open it....
- 02:20 PM Bug #5030 (New): RExpression2 actor will fail if the libs are not found
- Creating a new bug from discussion originating in bug#4985, relevant sections posted below:
Jianwu said:
I also t... - 01:35 PM Bug #4972: Write documentation for workflow-run-manager module
- done
- 01:34 PM Bug #5014: Add documentation to resources for the Workflow Run Manager module
- done
05/25/2010
- 06:55 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- (In reply to comment #9)
> (In reply to comment #8)
> > (In reply to comment #7)
> > > Error message about R not bein... - 05:52 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- (In reply to comment #8)
> (In reply to comment #7)
> > Error message about R not being on path should properly show ... - 04:27 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- (In reply to comment #7)
> Error message about R not being on path should properly show now on trunk at
> r24573 and ... - 04:23 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- Error message about R not being on path should properly show now on trunk at r24573 and 2.0 at r24576. Leaving open f...
- 12:01 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- After adding R to my PATH these workflows work for me as well. I'm going to take a look at the RExpression actor to s...
- 10:38 AM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- After adding R into the path, those two workflows work.
So we have to make sure R was added into the path on my wind... - 10:27 AM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- It seems that R is not in the path.
C:\Users\tao>R --no-save
'R' is not recognized as an internal or external comman... - 04:25 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- Infinite loop problem is fixed and error message about R not being on path should properly show now on trunk at r2457...
- 02:26 PM Bug #5022: 2.0-RC3 Windows installer creates Kepler 2.0-RC2 start menu choice, not Kepler 2.0-RC3
- I am re-opening this bug. Testing reveals that this is not fixed yet.
- 12:50 PM Bug #5013: Add documentation to resources for Tagging module
- Done.
- 12:49 PM Bug #4971: Write documentation for tagging module
- Wrote documentation and committed a PDF to trunk and branch and a Word docx to kepler-docs.
- 11:52 AM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- Sean Riddle posted bug 5029, which is a duplicate of this bug, so I closed 5029
Below is post:
> 1) Double-click on ... - 11:50 AM Bug #5029: Parameter changes can be committed without clicking the commit button
- This is a duplicate of 4869. Fixing this before Kepler-2.0 is not
advised as the problem involves modal dialogs. A ... - 11:25 AM Bug #5029 (Resolved): Parameter changes can be committed without clicking the commit button
- 1) Double-click on an actor and change a parameter.
2) Click the add button to trigger the "add parameter" dialog
3...
05/24/2010
- 07:12 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- This should be fixed.
I will need a person with a Windows machine to re-download the RC3 installer (which has chang... - 05:10 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I think I have figured out what was causing this. It appears to be an incorrect path in the workflow. I have updated ...
- 10:16 AM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I re-tested it. In my Windows 7 64 bit machine, the failure does *not* occur if I start Kepler using right-click menu...
- 09:42 AM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I can reproduce this failure on a Windows 2003 machine where Kepler
was installed as admin and I'm logged in as a non... - 06:48 PM Bug #5022: 2.0-RC3 Windows installer creates Kepler 2.0-RC2 start menu choice, not Kepler 2.0-RC3
- This appears to be fixed using the latest incarnation of the RC3 installer, which I am uploading now. Closing this bug.
- 06:44 PM Bug #5020: 2.0-RC3 installer: R Kepler Module is not optional
- I agree that there is no reason to bother with this window. But it is a very minor issue and I do not think we should...
- 03:17 PM Bug #5028 (Resolved): dataturbine overwrites recent data when frequently detaching
- When disconnecting from a DT server, a source must "detach" so that any uploaded data remain persistent. However, det...
- 03:08 PM Bug #4760: software to transfer sensor data from SPAN to DT
- I've created a program to do this: util.SpanToDT.
- 02:22 PM Bug #5027: Users should be able to build installers for the Kepler-2.0 branch
- I agree and think this is a good RFE.
However, the process of creating an installer at this point has too many movi... - 10:32 AM Bug #5027 (New): Users should be able to build installers for the Kepler-2.0 branch
- Kepler users should be able to build installers so that they may deploy
a shrinkwrapped installation to other users.... - 11:46 AM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- On my XP box w/ R 2.10.1:
00-StatisticalSummary - I have a different error when trying this workflow, it's described ... - 09:50 AM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- I can run these demos as a non-admin user under Windows 2003 Server R2
with a Kepler-2.0-RC3 installation that was in... - 11:44 AM Bug #4985: problem with workflows using Rexpression on Windows XP
- Ben tried to replicate on his XP box, and my problem with an infinite loop in _read didn't happen to him. It's still ...
- 08:42 AM Bug #4983: cannot run kepler.sh in RC2
- The acceptance criteria to close this bug would be for
"ant startup-script"
to create a kepler/kepler.sh script th...
05/23/2010
- 10:48 PM Bug #5021: release date is wrong in installer readme
- Fixed in the latest incarnation of the RC3 installer.
- 09:30 PM Bug #4983: cannot run kepler.sh in RC2
- Should I close this bug?
- 09:29 PM Bug #4994: ant installer fails with "Invalid directory 'dir' ... outreach-2.0.0/resources"
- Running "ant" to list the commands no longer lists the ant installer command. Closing this bug.
- 09:28 PM Bug #4997: SEEK/garpModel_ImageJ.xml has an exception while opening
- The maintainer of this workflow is going to need to fix this. I have fixed the paths and put in different names to av...
- 08:51 PM Bug #5025: Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- Hmm... this isn't a problem for me with my Mac running R 2.10.1. Who else can reproduce this?
- 08:47 PM Bug #5026: Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I am unable to reproduce this error on my mac. Who can reproduce this?
05/21/2010
- 01:05 AM Bug #4524: no prompt to save a changed report
- The steps I'm taking are as described in comment#7. Yes, this happens in 2.0 as well. If it's not happening for you, ...
05/20/2010
- 09:20 PM Bug #3072: Security issues with distributed execution
- It is fixed at version 24539. When a slave is started using startWithExecutionPolicy command, it will use master-slav...
- 08:33 PM Bug #4524: no prompt to save a changed report
- I am still not seeing the behavior that you describe. This was however, a behavior that was present in a previous ve...
- 04:42 PM Bug #4524: no prompt to save a changed report
- Things still behave as described in comment7 at r24535 in reporting trunk for me, on both os X and windows XP.
- 11:55 AM Bug #4524: no prompt to save a changed report
- Revision 24531 is the most recent, I have updated the files in both trunk and in the 2.0 branch. In this revision. De...
- 11:18 AM Bug #4524: no prompt to save a changed report
- This is at r24529 on reporting trunk. You haven't made changes post that revision that are checked in. Are you not se...
- 11:12 AM Bug #4524: no prompt to save a changed report
- Can you please tell me what revision number you have for this ? What you are describing sounds like an old version. ...
- 06:27 PM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- I made a significant number of changes and committed to r1254 in kepler-docs, and 24536 (trunk) and r 24537 (2.0). Yo...
- 02:12 PM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- O.K. that explains it. I had a local document that I used to create the document now currently named reporting.docx,...
- 11:33 AM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- The plan hasn't changed.
As mentioned, I made fixes and additions to wrp.docx (r1249). Afaik this doc only exists in... - 11:09 AM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- I would like to know what version of this you have.
Also, where in svn have you been getting your current version ... - 05:45 PM Bug #5026 (Resolved): Error dialog pop up in RC3 when closing the ImageJ window after workflow execution.
- I found it when I executed the workflow: KeplerData\Kepler-2.0-Demos\demos\getting-started\03-ImageDisplay.xml on Win...
- 03:21 PM Bug #5025 (Resolved): Couldn't run the workflows 00-StatisticalSummary and 08-CommandLine_2
- On windows vista (With R 2.9) and windows 7 (With R 2.10.1), I got the errors:
1(00-StatisticalSummary):
ptolem... - 03:01 PM Bug #5024 (Resolved): Uninstaller couldn't delete the rc3 folder on windows 7
- Uninstaller couldn't remove the rc3 folder in Program File on Windows 7 (Vista). But it can remove desktop icon and k...
- 02:28 PM Bug #4985: problem with workflows using Rexpression on Windows XP
- My problem in comment 1-- workflows using RExpression on XP never finish executing -- is still an issue in RC3 and on...
- 02:20 PM Bug #5023: The desktop icon of rc3 is a blank page on windows vista
- bug #5023 is a duplicate of bug #5022
- 02:03 PM Bug #5023: The desktop icon of rc3 is a blank page on windows vista
- This happens on windows xp as well. Also, the icon and start menu call it RC2 rather than rc3.
- 02:00 PM Bug #5023 (Resolved): The desktop icon of rc3 is a blank page on windows vista
- The icon is a blank page on windows. It was a issue on rc2 as well.
- 01:09 PM Bug #4983: cannot run kepler.sh in RC2
- This works for me:
--start--
#!/bin/sh -x
# This script starts Kepler.
# Run with -h to see all command-line option... - 04:50 AM Bug #4983: cannot run kepler.sh in RC2
- This bug is still true in RC 3. If you are in the same directory as kepler.sh or kepler.bat, it works, but if not, it...
- 12:56 PM Bug #5009: Opening two KARS that have the same Workflow, but that have different report layouts, will make the first layout refresh itself with the layout from the KAR that was opened most recently.
- I spent a bit looking into this last night. I was able to keep the report layout from refreshing in the window in whi...
- 12:52 PM Bug #5022 (Resolved): 2.0-RC3 Windows installer creates Kepler 2.0-RC2 start menu choice, not Kepler 2.0-RC3
- With the Kepler-2.0-RC3 Windows installer, the shortcut in Start->All Programs
->Kepler is Kepler 2.0-RC2, not Keple... - 12:34 PM Bug #4993: Kepler-2.0 cannot be built under windows because of apple-extensions
- Closing.
I verified that I can build the Kepler-2.0 branch under Windows Server 2003. - 12:12 PM Bug #5017: ReportLayout LSID and referral list should be maintained
- It might also be nice to see who originally created and who contributed to a report layout, esp in a 'publication kar...
- 11:55 AM Bug #5017: ReportLayout LSID and referral list should be maintained
- Hmm, I'm trying to think of how we'd use the "provenance of the report layout". I suppose that could be useful for un...
- 11:47 AM Bug #5017: ReportLayout LSID and referral list should be maintained
- They're still not NamedObjs. Unfortunately the constructor for NamedObjIdReferralList needs a NamedObj. Aaron recomme...
- 11:34 AM Bug #5017: ReportLayout LSID and referral list should be maintained
- are report layouts now NamedObjs or something?
Where is the referral list stored if not? - 11:42 AM Bug #5021 (Resolved): release date is wrong in installer readme
- change the date to the actual release date. it's set as may 12 right now.
- 11:32 AM Bug #5019: R_output_example.xml fails
- changed the workflow to use different columns (of doubles) for the array plotter input.
- 04:29 AM Bug #5019 (Resolved): R_output_example.xml fails
- The R_output_example.xml which is in /KeplerData/Kepler-2.0-Demos/demos/R/ fails to run properly.
- 10:28 AM Bug #5020 (Resolved): 2.0-RC3 installer: R Kepler Module is not optional
- When installing Kepler-2.0-RC3, I'm presented with
two choices:
Kepler
R Kepler Module
Both are required, I can... - 09:03 AM Bug #4994: ant installer fails with "Invalid directory 'dir' ... outreach-2.0.0/resources"
- In the Kepler-2.0 tree.
Running "ant" yields
[exec] installer Builds the Kepler installe... - 04:35 AM Bug #4994: ant installer fails with "Invalid directory 'dir' ... outreach-2.0.0/resources"
- At this point, building installers is meant for releases. Later on, I would like to automate the entire install proce...
- 04:44 AM Bug #4984: user mailing list is wrong
- The mailing list on the installer is now correct. The date is off, saying May 12 instead of May 20. However, rebuildi...
- 04:40 AM Bug #4987: RC2 cannot find R pkg
- R is no longer installed, but must be installed manually.
If a workflow that depends on R fails because R is not pre... - 04:38 AM Bug #4991: Kepler-2.0-RC2 fails to start for a non-admin user after admin install
- This should now work.
- 04:37 AM Bug #4992: In a shared installation, how does the user get the demo?
- The demos are now copied to the users home directory upon start-up if they are not already there.
- 04:33 AM Bug #4997: SEEK/garpModel_ImageJ.xml has an exception while opening
- This is still occurring in RC3. I think it is a problem with paths that is probably easily fixed. I will try to take ...
- 04:25 AM Bug #4996: 2.0-RC2 demos don't work
- These demos now work. There might be others that are failing under RC3, but I have tested all of the demos in getting...
- 04:22 AM Bug #5005: regular user couldn't start kepler after it was installed on windows 7
- Since published.txt and present.txt are now stored and written to the cache, this bug now should be fixed. Closing.
05/19/2010
- 04:37 PM Bug #5015: Export of runs contain different, and missing or extra reporting items now
- Closing, opened bug#5018 for issue described above.
- 04:36 PM Bug #5018 (New): Items with the same LSID show with the same name in the Components Library
- If you have two items within a KAR that have different filenames but the same LSID, they show as one item in the comp...
- 04:22 PM Bug #4969: Exported run-kar puts a roml at root of Components tree
- I can't find the replication procedure for this, or it's no longer happening. Please reopen if you see this.
- 04:09 PM Bug #4524: no prompt to save a changed report
- This doesn't work for me. If I design a workflow and report layout, save it to kar, change the report layout, and the...
- 03:58 PM Bug #4647: Write documentation for Reporting in the style of Kepler Docs
- There are many errors in this documentation. It looks like my corrections and additions to the former wrp.docx (r 124...
- 03:08 PM Bug #5017 (Resolved): ReportLayout LSID and referral list should be maintained
- When a user changes a reportLayout, its LSID revision should increment.
When a user changes a reportLayout with an L... - 02:59 PM Bug #4977: Can't associate multiple sets of reporting artifacts in one kar with different executions
- was fixed at r24481 (trunk) and r24483 (2.0). Made reporting items depend on run when exporting a run-kar, and on imp...
- 01:28 PM Bug #4281: ant update produces message about running svn cleanup
- This bug is now affecting me under Mac OS X. I've also seen it under
Windows Server 2003.
svn update yields:
[upda...
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