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From 03/29/2006 to 04/27/2006

04/28/2006

06:15 PM Bug #2143: fix functionality and GUI issues with query builder
The aboved tasks were done.
I added more stuff:
1. Okay and Cancel buttons
2. New right click menu to delete existed ...
Jing Tao
05:18 PM Bug #2429 (Resolved): link between Digir actor and downstrem ator disconnected when outtype is "as field"
When user trys to open a workflow which contains a digir actor and the output type of this actor is "as field", user ... Jing Tao

04/27/2006

04:16 PM Bug #2384: Documentation display problems in Kepler
This 'bug' is fixed by correctly defining parameters so that constructor uses the same text as variable name and usin... Dan Higgins
04:13 PM Bug #2348: Rewrite disk based GIS code for speed increase
I am moving this to post 1.0 since it is not essential and we have too many other things to do. Dan Higgins
04:04 PM Bug #2427: EML2 Data Source problems with local metadata/data
Now I added code to get the EML file location from parameter. And it works for me in both windows and linux machine.
...
Jing Tao
02:23 PM Bug #2014: Disallow editing of the schema for data
Set schema and sql parameter visibility to EXPERT. No it is hidden by common user. Jing Tao
10:19 AM Bug #2419: turn Digir source 'off' as default data source
In lib/config.xml file, new elements - selected are added to both service and document type. Kepler can read this set... Jing Tao
10:15 AM Bug #2372: Digir datasource data retreival 'by field' does not work
In digir actor implementation class, somehow the data type of attributes didn't work. This is the reason why if "by f... Jing Tao

04/26/2006

04:44 PM Bug #2427: EML2 Data Source problems with local metadata/data
It is a thread issue. So how an Entity object not be assinged value (keep null) before it was called. The fixed was c... Jing Tao
02:59 PM Bug #2427: EML2 Data Source problems with local metadata/data
I tried a brand new cvs checkout of kepler and ptolemy in windows, it work fine to me! Jing Tao
01:13 PM Bug #2427: EML2 Data Source problems with local metadata/data
I can open the workflow OK on Windows using last nights zip, but I CANNOT with a brand new checkout of Kepler CVS (on... Dan Higgins
12:13 PM Bug #2427: EML2 Data Source problems with local metadata/data
I tried the workflow which dan use local eml file. After deleting cache, I can still open it and run it without any p... Jing Tao
11:34 AM Bug #2427: EML2 Data Source problems with local metadata/data
I created a workflow with an eml datasource using a local EML file. It worked. Closing Kepler and reopening works UNT... Dan Higgins
02:03 PM Bug #2421: Port Name bug in SummaryStatistics actor
I had missed two spots where a port was created and the name was not changed. this is now fixed. Chad Berkley
01:44 PM Bug #1895: remote actor repository
The remote repository is now working with web services. The new permanent url is library.kepler-project.org. Curren... Chad Berkley
01:42 PM Bug #2412: Unable to Create Kar file from composite
The reason you cannot create a kar file from an instantiated composite is that the changes to the moml are not saved ... Chad Berkley
07:03 PM Bug #2321: merge exp files into ptolemy CVS
I removed Director and ComponentEntity.
I'm working on VergilApplication.
Christopher Brooks

04/25/2006

11:16 AM Bug #2427 (Resolved): EML2 Data Source problems with local metadata/data
There are several problems with using the EML DataSource actor with local EML metadata and associated data files.
...
Dan Higgins
10:22 AM Bug #2426 (Resolved): Search for 'image' in actor tree 'hangs' window in nightly build
A search for 'image' in the actor tab 'hangs' the window when one is using the nightly zipped version; message is
Un...
Dan Higgins

04/24/2006

02:57 PM Bug #2425 (Resolved): Actor documentation retains information for deleted ports
if you create a new (R) actor port and then delete it, the documentation form still retains a place for the deleted p... Josh Madin

04/22/2006

05:43 PM Bug #2420: Need a 25x25 kepler icon to decorate title bars
I'm closing this because we have the icon and it shows up in the
different windows.
Christopher Brooks

04/21/2006

05:07 PM Bug #2420: Need a 25x25 kepler icon to decorate title bars
Created a new small 25 x 25 icon for title bar as a stop-gap. Laura and I originally talked about using a solid teal ... Matthew Brooke

04/20/2006

02:36 PM Bug #2413: ICONS: Monitor Value icon should show value
fixed - added this to moml file in kepelr/actors/MonitorValue/MonitorValue.xml:
<property name="displayWidth" class=...
Matthew Brooke
12:28 PM Bug #2324: SVG - old-style icon still displayed for certain actors
OK - set icons by LSID (in uiSVGIconMappingsByLSID.properties) for:
BasicUnits, CGSUnitBase, ElectronicUnitBase, SI (...
Matthew Brooke

04/19/2006

10:29 AM Bug #2343: add welcome screen for release 1.0
I'm changing the target milestone to 1.0.0. Christopher Brooks
09:57 AM Bug #2343: add welcome screen for release 1.0
oops sorry, meant the welcome screen not the splash screen as I referenced in the last note. Laura Downey
09:55 AM Bug #2343: add welcome screen for release 1.0
Just looked at splash screen and it is very very close. Just 2 items remain to be adjust so that it matches the spec... Laura Downey

04/18/2006

03:46 PM Bug #2324: SVG - old-style icon still displayed for certain actors

The remaining actors without new icons are as follows:
BasicUnits (ptolemy.data.unit.UnitSystem)
CGSUnitBas...
Matthew Brooke
03:37 PM Bug #2324: SVG - old-style icon still displayed for certain actors
Fixed some typos in uiSVGMappingsByClass props file, and removed some references to BoxedValueIcon in actor moml.
O...
Matthew Brooke
05:05 PM Bug #2324: SVG - old-style icon still displayed for certain actors

added a line to build-ptolemy.xml, to exclude files of the form *Icon.xml, since these interfere with new SVG icons....
Matthew Brooke
11:09 AM Bug #2421: Port Name bug in SummaryStatistics actor
I suspect that the problem occurs for all derived actors. This would mean the any actors built on RExpression would n... Dan Higgins
11:07 AM Bug #2421 (Resolved): Port Name bug in SummaryStatistics actor
Dan Higgins wrote:
> Hey Chad,
>
> If I simply drag the SummaryStatistics actor (a specialized version of the R...
Dan Higgins
08:02 PM Bug #2321: merge exp files into ptolemy CVS
I'll take this bug.
I was able to move a few files, see below.
I can also probably move the DBConnectionToken out.
A...
Christopher Brooks
07:58 PM Bug #2420 (Resolved): Need a 25x25 kepler icon to decorate title bars
Hi Laura,
I'm assigning this bug to you because you will either know how to fix it
or know who to assign this one t...
Christopher Brooks

04/17/2006

04:15 PM Bug #2056: Port labels appear 'twice' when DataSource actor added
ote - also happens on workflows without EML datasources Matthew Brooke
04:14 PM Bug #2056: Port labels appear 'twice' when DataSource actor added
moved to 1.0, per conf call 17Apr06 Matthew Brooke
10:55 AM Bug #2242: move metacat ecogrid service to new host
Done. Both the KNB metacat and the EcoGrid interfaces now live on knb.msi.ucsb.edu. FIXED. Matt Jones
10:54 AM Bug #2171: Add support for missingValueCode in EML parser
Christopher added NIL Token in ptolemy and our mssingValue can be expressed as NIL Token. So this bug fixed. Jing Tao
07:45 PM Bug #2419 (Resolved): turn Digir source 'off' as default data source
Digir source has not been working and this results in 'hung' data searches. Even when working, Digir greatly increase... Dan Higgins
07:30 PM Bug #2273: Problem with Hydro1K Flow Accumulation data
Fixing this would require changes in the gdal code. Also, the Accumulation data is apparently not considered vital. T... Dan Higgins
07:20 PM Bug #2415: Create KAR from Actor bug (on Mac)
Corrected this problem by changing the OpenFileDialog to a SaveFileDialog Dan Higgins

04/14/2006

08:50 AM Bug #2382: Documentation kar does not appear in actor tree
Matthew,
I would say 'no' although the two are similar. The Documentation actor provides a direct link to a html f...
Dan Higgins

04/13/2006

04:26 PM Bug #2417 (Resolved): TRACKING: DOCUMENTATION - complete first draft of documentation
complete first draft of documentation
Includes:
Actor Man Pages
Getting started guide (incl. tutorial chapters)
...
Matthew Brooke
04:15 PM Bug #2382: Documentation kar does not appear in actor tree
Dan -
Has this Documentation actor been superseded by Edward's DocViewer? If so, let's close this bug
Thanks
Matthew Brooke
04:04 PM Bug #2416 (In Progress): ICONS: Tracking bug - Rearranging and regenerating icons
Tracking bug - Rearranging and regenerating icons, per MB, MBJ and LLD conf calls
See Kepler Workflows with annot...
Matthew Brooke
03:58 PM Bug #2034: provide visual indication of default button/choice on windows/dialogs
too general. will address in each dialog box, and any bugs can then be targeted specifically at occurrences Matthew Brooke
03:56 PM Bug #2035: use checkboxes and radio buttons correctly
has largely been addressed in current ptolemy dialogs, but will be addressed specifically in new dialogs thru' new, s... Matthew Brooke
03:44 PM Bug #2415 (Resolved): Create KAR from Actor bug (on Mac)
On the Mac, if one uses the 'Create KAR from Actor' menu on a modified RExpression actor, the Browse button for setti... Dan Higgins
03:04 PM Bug #2349: Actors should have preconditions to test for long runs
This enhancement is "Actors should have preconditions to test for long runs."
It is a nice idea, but low priority and...
Christopher Brooks
03:01 PM Bug #2318: Copyrights and licenses of subpackages need to be handled
I'm assigning this to Dan because he is the release master.
I'm not sure if there is time to do this or not, it is Da...
Christopher Brooks
02:44 PM Bug #2343: add welcome screen for release 1.0
I'm closing this bug, which is "add welcome screen for release 1.0"
There is a related bug,
"Opening a preexisting m...
Christopher Brooks
02:42 PM Bug #2414 (New): Opening a preexisting model should open in a blank viewer
In "add welcome screen for release 1.0" at
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2343
Matthew wrote:...
Christopher Brooks
02:24 PM Bug #2246: TOOLBAR: status on opening workflows and blank frames
I took another look at this bug. In many ways, we could probably
close this, it falls under the newer bug
"enable/di...
Christopher Brooks
02:01 PM Bug #2413 (Resolved): ICONS: Monitor Value icon should show value
Monitor Value icon should show value instead of svg icon Matthew Brooke
12:06 PM Bug #2352: Preferences System needs to be resolved
I'm closing this bug because
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2343
"add welcome screen for release ...
Christopher Brooks
12:03 PM Bug #2240: add support for null values to data passing among ports
I'm marking this bug as fixed, because I think the work here is done.
If there are problems, it can be reopened.
One...
Christopher Brooks
11:54 AM Bug #2407: Kepler process keeps running after close all windows
Fixed by updating ptii/ptolemy/actor/lib/WelcomeWindow:
show(): Call super.close() because _close() expects that the ...
Christopher Brooks

04/12/2006

03:18 PM Bug #2324: SVG - old-style icon still displayed for certain actors
note to self (or whoever has to change these "*Constant" icons in future...)
Actual icon is ptolemy.vergil.icon.Boxe...
Matthew Brooke
02:42 PM Bug #2324: SVG - old-style icon still displayed for certain actors
changed icon assignments for:
Permanent String Constant (src/org/resurgence/actor/PermanentStringConstant.java)
and...
Matthew Brooke
02:34 PM Bug #2407: Kepler process keeps running after close all windows
I'll handle this one.
The problem is that we have a tableau associated with welcome window.
It will be a little while...
Christopher Brooks
01:12 PM Bug #2407: Kepler process keeps running after close all windows
HINT: in Kepler, you can get the WelcomeWindow to show up again by deleting the file .ptolemyII in your 'home' direco... Dan Higgins
01:48 PM Bug #2412 (Resolved): Unable to Create Kar file from composite
A number of problem occur when trying to create a kar file from an existing composite actor in a workflow.
1) If y...
Dan Higgins

04/11/2006

03:02 PM Bug #2389: Actor seach problem
made the _hideName attribute self-closing tag. previously, it surrounded the icon description, which i think was an e... Matthew Brooke
02:43 PM Bug #2355: TOOLBAR: icon states don't display correctly for first four toolbar buttons
done Matthew Brooke
02:02 PM Bug #2409: Display Name Not Showing for org.sdm.spa.Pause and org.sdm.spa.Stop
may be intermittent - subsequently was able to get "Stop" to show up, even though it had failed previously - but stil... Matthew Brooke
10:18 AM Bug #2409 (Resolved): Display Name Not Showing for org.sdm.spa.Pause and org.sdm.spa.Stop
org.sdm.spa.Pause and org.sdm.spa.Stop
When dragged to canvas, name ("Pause" or "Stop") does not show up. Right cl...
Matthew Brooke
01:21 PM Bug #2410 (New): need feature in UI for users to assign icon to an actor
If a user creates an R actor, there is currently no method for them to assign an icon to the R actor from the user in... Laura Downey

04/10/2006

04:51 PM Bug #2323: Remove text added with "Attribute" actor from older workflows
Spoke with Matt Jones on 10Apr06 - basically, any new text annotations created in Kepler will use the Annotation Acto... Matthew Brooke
02:19 PM Bug #2408 (Resolved): Need composite actor instance in actor tree
Currently, when you drag a 'CompositeActor' from the actor tree to the work area, you get a 'CompositeActor' CLASS ac... Dan Higgins

04/07/2006

04:06 PM Bug #2324: SVG - old-style icon still displayed for certain actors
ah! - the DocViewer was in there, but it had no text label (as Dan had previously pointed out in an email), and its t... Matthew Brooke
11:21 AM Bug #2324: SVG - old-style icon still displayed for certain actors
DocViewer seems to be missing from your list. It only displays a rectangle. It should have text saying something like... Dan Higgins
10:59 AM Bug #2324: SVG - old-style icon still displayed for certain actors
looked thru the 3 workflows created by Matt, which show all the current actors. According to these WFs, the following... Matthew Brooke
02:58 PM Bug #2407 (Resolved): Kepler process keeps running after close all windows
If you turn off welcome screen, then run kepler again. You will find kepler process keeps running after close all win... Jing Tao
02:57 PM Bug #2382: Documentation kar does not appear in actor tree
This issue, reported by Zhijie, is now being tracked by Bug #2389. This bug should be used for tracking the original ... Matthew Brooke
02:54 PM Bug #2389: Actor seach problem
This seems to be caused by DocViewer Parameter.
It appears in the tree with a "+" next to it, as if it is a folder ...
Matthew Brooke
01:53 PM Bug #2399: problems with GARP_SingleSpecies_BestRuleSet.xml
Revised the RScript so that a nil ruleset is not sent to the GARP actor. This fix added some parameter checks to the ... Dan Higgins
06:23 PM Bug #2400: Need ability to set parameter ranges and relationships.
This would be cool. It would be nice if there were parameters that
had a limited range. The range could be an attri...
Christopher Brooks
05:52 PM Bug #1844: tool tip problems
Now looks like it's fixed - checked in to ptolemy tree (ptII/ptolemy/vergil/basic/EditorDropTarget.java). Tested on w... Matthew Brooke

04/06/2006

01:47 PM Bug #2400 (New): Need ability to set parameter ranges and relationships.
We might consider a new Parameter actor that would allow the user to specify ranges of values to be allowed and even ... Dan Higgins
01:42 PM Bug #2399 (Resolved): problems with GARP_SingleSpecies_BestRuleSet.xml
The workflow "GARP_SingleSpecies_BestRuleSet.xml" (#19 in the GARP example list) will crash if the numIterations para... Dan Higgins
08:38 PM Bug #2398 (Resolved): change R home directory that is default of RExpression actor
The default working dir for R in the RExpession actor is set to the users $HOME directory. This causes a buildup of m... Dan Higgins
05:58 PM Bug #1844: tool tip problems
Reopening, since Matt reported this bug is still not fixed if a workflow is executed first, *then* an actor is dragge... Matthew Brooke

04/05/2006

02:21 PM Bug #1844: tool tip problems
Fixed the major problem whereby tooltips stopped appearing after dragging an actor to the canvas (fix checked into th... Matthew Brooke
02:20 PM Bug #2397 (New): TOOLTIPS: dual screen setup - tooltip sometimes shown on wrong screen
Moved to its own bug from Bug #1844 -
Reported by Laura Downey <ldowney@lternet.edu>:
---------------------------...
Matthew Brooke
02:18 PM Bug #2396 (Resolved): TOOLTIPS: Sometimes line/relation tooltip appears when hovering over port
Moved to its own bug from Bug #1844 -
Reported by Laura Downey <ldowney@lternet.edu>:
---------------------------...
Matthew Brooke

04/04/2006

04:59 PM Bug #2361: Using backspace in the search pane deletes highlighted components
Fixed by changing registerKeyboardAction() to use
JComponent.WHEN_ANCESTOR_OF_FOCUSED_COMPONENT
instead of
JCom...
Matthew Brooke
10:17 AM Bug #2392: MENUS: Top-Level Menu - need centralized way to remove menubar

There is already a way to do this - all you need to do is call hideMenuBar() (which is a public method in ptolemy.gu...
Matthew Brooke
10:13 AM Bug #2343: add welcome screen for release 1.0
Changed so menubar no longer appears Matthew Brooke

04/03/2006

02:52 PM Bug #2393 (New): Need ability to disable 'add port' to actors where not supported
Currently one can 'add a port' to any actor even when that actor is not designed to look for new ports. This has conf... Dan Higgins

03/31/2006

03:01 PM Bug #1844: tool tip problems
test of new server - ignore Matthew Brooke

03/30/2006

12:41 PM Bug #2343: add welcome screen for release 1.0
I just checked an edited version into CVS that uses css - please feel free to
tweak the fonts, positioning etc as nee...
Matthew Brooke
10:31 AM Bug #2343: add welcome screen for release 1.0
I think the plain text you're seeing may be caused by something not being quite
right with the html/css source code. ...
Matthew Brooke
09:41 AM Bug #2343: add welcome screen for release 1.0
Right now the CSS just shows up as plain text as its on a JEditorPane. Nandita Mangal
09:37 AM Bug #2343: add welcome screen for release 1.0
>> Nandita is looking at style sheets [..]
> Nandita-->The "Welcome to Kepler 1.0"requires CSS for sure....I don't
>...
Matthew Brooke
10:44 PM Bug #2343: add welcome screen for release 1.0
Christopher:Thanks for updating the WelcomWindow and putting it in ptolemy tree.
I updated intro.htm to make it look ...
Nandita Mangal
08:44 PM Bug #2343: add welcome screen for release 1.0
I moved the WelcomeWindow code out of exp and back to ptolemy.
WelcomeWindow now uses ptolemy.actor.gui.PtolemyPrefer...
Christopher Brooks

03/29/2006

02:40 PM Bug #2392 (Resolved): MENUS: Top-Level Menu - need centralized way to remove menubar
Some dialogs need to be shown without menubars (eg Welcome Window, Query Builder
dialog). We therefore need centrali...
Matthew Brooke
01:26 PM Bug #2343: add welcome screen for release 1.0
Okay we are getting there but some other changes need to be made to get the
dialog to look like what is spec'd on th...
Laura Downey
 

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