Activity
From 10/29/2006 to 11/27/2006
11/27/2006
- 01:43 PM Bug #2684 (New): Miscellaneous literature records for distribution
- I think we should add a category of orange for miscellaneous literature records such as journal articles.
What th... - 11:04 AM Bug #2683 (In Progress): User submissions of new occurrence records
- We should probably add a tool so that additions can be submitted by users. At a minimum we should provide a template ...
11/26/2006
- 03:28 PM Bug #2676: Print button on map pages does not work
- fixed
- 11:52 AM Bug #2676: Print button on map pages does not work
- fixed
Please make sure that the browser does not block the pop window. The printable page will show up in a popup wi... - 03:11 PM Bug #2680: Reformat dates on images
- fixed
- 10:00 AM Bug #2680: Reformat dates on images
- fixed
- 03:08 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- Looks good. Brassica nirgra now shows as NCSU.
I cannot fully test this feature until we have a species with differ... - 11:18 AM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- fixed:
1. querying function changed at the server side
2. sent email to Hinar to update the new classes
3. please ch...
11/25/2006
- 03:25 PM Bug #2659: StratumPlot not linked to HerbData
- These must be the plots that Joel uploaded. I am worried that he might have done a bunch of work on the plots after ...
- 07:46 AM Bug #2652: Netscape & Firefox do not generate maps properly
- fixed
- 07:46 AM Bug #2652: Netscape & Firefox do not generate maps properly
- Works now. Perhaps the moving of the sources tab solved the problem. I checked Netscape 8.1.2 and FireFox 1.0.1.
- 07:36 AM Bug #2633: Remove search button from search page
- Well, it is still on the search page, but this is not a big deal and I am going to close this bug.
- 07:34 AM Bug #2617: 36. The Data Source tab
- fixed
- 07:33 AM Bug #2680 (Closed): Reformat dates on images
- Dates are hard to read on images. 19560831 should read 08-31-1956 as in the specimens.
- 07:29 AM Bug #2600: ID number on the specimen & images pages needs revision
- Fixed
- 07:21 AM Bug #2679 (New): Port static NCSU records into SPECIFY
- Migrate the static NCSU collection records into SPECIFY. This may require consultation with the SPECIFY staff at KU, ...
- 07:18 AM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- Much progress has been made.
One problem remains. Although NCSU collections in SPECIFY show up correctly tagged in ... - 07:06 AM Bug #2678 (Closed): Create tool for editing static database records of taxon occurrence
- We need a tool for editing records in the static database of occurrences. For example, for a given record of occurren...
- 06:53 AM Bug #2597: Display of cultivated records should be optional
- Below the check boxes for sources, draw a line and provide two boxes that allow selection of "Reported as cultivated"...
11/22/2006
- 01:02 PM Bug #2676 (Closed): Print button on map pages does not work
- Print button on map pages does not work. The dogwood sping forever. This was reported to me by a user, and I had te...
11/18/2006
- 11:00 AM Bug #2617: 36. The Data Source tab
- fixed
- 10:16 AM Bug #2633: Remove search button from search page
- 1. removed the left side menu bar to make more room for contents
2. added menus (about and Search) at the top frame
- 10:13 AM Bug #2600: ID number on the specimen & images pages needs revision
- fixed. see bug #2615
- 09:22 AM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- 1. changed the querying class at the server side
2. Changed the html pages (both colletions and images) to show serie...
11/16/2006
- 02:40 PM Bug #2671: Finish Import DB: what to do with Main Menu visible tabs field?
- and check for new fields that aren't on the table. If not there, it gets tricky, supply default value and write it a...
- 02:38 PM Bug #2671 (Resolved): Finish Import DB: what to do with Main Menu visible tabs field?
- Allow CVS Entry database to link to another CVS Entry database and run through the data processing steps from inside ...
11/13/2006
- 01:19 PM Bug #2668 (New): Geocoordinates
- We might have a student in the GIS certificate program take on a pilot project of georeferencing herbarium specimens ...
- 01:15 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- The Series field tells us which herbarium is in possession of a certain specimen. The table CatalogSeries shows what ...
- 01:08 PM Bug #2653: Removal of Databased Publications
- This has been taken care of on our end. We have two pick lists now, Format (better name for it?) for Documents/Photog...
- 09:51 AM Bug #2667 (Resolved): Test Entry Tool processing of data vs. SAS
- SAS can process data (the old way) and we should take some new data, export it to old style CVS text files, run them ...
- 09:48 AM Bug #2666 (New): ready for DBA: Project 76 (Elizabeth City, NC): 52 plots
- this data needs to be processed and added to the (v2006) central archive
(Forbes writing:)
> For now, I would sugge... - 09:47 AM Bug #2665 (New): Ready for DBA process: Project 75 (Singletary Lake, NC): 52 plots
- this data needs to be processed and added to the (v2006) central archive
(Forbes writing:)
> For now, I would sugge... - 09:46 AM Bug #2664 (Resolved): 5 errs remain: Project 74 (Cape Fear Riparian): 62 plots
- this data needs to be processed and added to the (v2006) central archive
- 09:46 AM Bug #2663 (New): 2 errs left: + duplicates flagged: Project 73 (Mountain Bogs): 64 plots
- this data needs to be processed and added to the (v2006) central archive
- 09:46 AM Bug #2662 (New): Unfolding: Project 64 (Brunswick Co. NC): 88 plots
- this data needs to be processed and added to the (v2006) central archive
- 09:45 AM Bug #2661 (New): comments in XLS resolve: Project 63 (Francis Marion NF): 54 plots
- this data needs to be processed and added to the (v2006) central archive
- 09:45 AM Bug #2660 (New): toArchiveDB: Project 62 (Windsor): 7 plots
- this data needs to be processed and added to the (v2006) central archive
11/12/2006
- 01:30 PM Bug #2600: ID number on the specimen & images pages needs revision
- changed id of images to the accession number. Need more information from Lisa about which field contains herbarium n...
- 01:11 PM Bug #2639: Inferred relationships too broad
- Rule used here is (rule 24 in the rule document):
IF all children of A < B THEN A<=B
Original relationships:
Cary... - 12:48 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name
- I need to discuss with Bob and Alan Weakley about this one.
- 12:42 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- changed in "http://152.2.14.231/website/NCFloraTest/". Now collections show up for any herbarium collections. We need...
- 10:41 AM Bug #2574: update species in old archive database from Forbes
- Joel has gotten back to us on Xyris and they are just an unknown sp in Xyris, not Floridian Bay. This bug is now squ...
11/10/2006
- 05:24 PM Bug #2574: update species in old archive database from Forbes
- Fixed, except for getting back info from Joel as to which Xyris we should use.
- 04:15 PM Bug #2574: update species in old archive database from Forbes
- Xyris on these plots has NOT been resolved, we are checking with Joel:
plotID
051-08-0244
051-08-0245
051-08-0250
f... - 03:16 PM Bug #2574: update species in old archive database from Forbes
- Dicranella has been resolved.
- 04:29 PM Bug #2659 (Resolved): StratumPlot not linked to HerbData
- The stratum plot records are not properly linked in from the data sources for recent projects. StratumPlot.StratumPl...
- 02:42 PM Bug #2640: Identify USDA species without county distribution where other spp in genus have distribution
- This PART of the bug is done, but there are still other related bugs that need addressing.
http://www.unc.edu/~mikele... - 02:31 PM Bug #2640: Identify USDA species without county distribution where other spp in genus have distribution
- Note that the other bugs related to this one can be nicely viewed here:
http://bugzilla.ecoinformatics.org/showdepend... - 02:27 PM Bug #2658 (Closed): Split USDA records into concept-based and nominal sets
- +++ This bug was initially created as a clone of Bug #2640 +++
Look at PERSBOR s.s. with all those records for NC,... - 02:26 PM Bug #2657 (Closed): Highlight species with too few counties and those with too many
- +++ This bug was initially created as a clone of Bug #2640 +++
Look at PERSBOR s.s. with all those records for NC,...
11/09/2006
- 09:18 AM Bug #2652: Netscape & Firefox do not generate maps properly
- Firefox 1.5 has the same issues as Netscape
- 07:14 AM Bug #2652 (Closed): Netscape & Firefox do not generate maps properly
- If you generate a map with Netscape 8.1, the map never quite finishes. You do get a map, but you also get an hourgla...
- 07:38 AM Bug #2590: "get missing taxa" search
- resolved
- 07:00 AM Bug #2590: "get missing taxa" search
- Bug resolved
- 07:36 AM Bug #2656 (New): County lists should include ambiguous records
- Currently ambiguous occurrences are not so annotated in the county lists. Also, ambiguous taxa are not handled proper...
- 07:29 AM Bug #2655 (Closed): Download county list
- You can search by county to get a list of county records, or records missing in a county, but we have no way to downl...
- 07:28 AM Bug #2654 (Closed): Selection box for sources for county records
- When you search by county, it is not clear which sources of county records are being used to generate the list. We sh...
- 07:26 AM Bug #2653 (Closed): Removal of Databased Publications
- There are two entries in our typology list in Specify that I think would be best to avoid in the atlas. These are Doc...
- 07:10 AM Bug #2651 (Closed): font issues with various browsers
- If you create a map of a taxon with IE 6.0 or 7.0, everything looks fine. However, if you create a map with either N...
11/08/2006
- 11:29 PM Bug #2624: 43. Paging through large families.
- bug resolved
- 07:56 PM Bug #2624: 43. Paging through large families.
- fixed
- 11:27 PM Bug #2605: 24. Search all counties in a state
- bug resolved
- 07:25 PM Bug #2605: 24. Search all counties in a state
- fixed
- 07:10 PM Bug #2590: "get missing taxa" search
- (N1-C1): w,y
(N2-C2): y,z
(N1-C1)+(N2-C2): w,y,z
N4-C4: w,y
(N1-C1)+(N2-C2)!=N4-C4
11/06/2006
- 11:00 AM Bug #2645 (Closed): split USDA in the legend into into two labels
- As a separate and contingent bug, Xianhua should split USDA in the legend
into into two labels and make any code cha...
11/05/2006
- 11:38 PM Bug #2643 (Closed): Search for name synonymized by Weakley
- There is some unexplained inconsistency here, but in the end I see two types of errors resultsing from one situation....
- 11:17 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name
- If you look at the RAB book you find a map for Ilex decidua and a map for Ilex decidua var. longipes. What RAB mean ...
- 01:22 PM Bug #2637: RAB records of nominal variety occurrences have incomplete name
- I do not understand about this one. For me there is nothing wrong about the map of Ilex longipes. We have Ilex longip...
- 11:06 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- Example = Brassica nigra, which is an NCSC specimen in the NCU SPecify database. The colelctiosn show up as specimen...
- 07:14 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- This bug refers to those NCSU specimens stored in the Specify database (a small number) and not to the larger number ...
- 01:11 PM Bug #2615: Failure to map WEWO and other non-NCU series in Specify
- The reason NCSU collections do not show up in "Collections" is that they are not stored in Specify database as NCU sp...
- 11:01 PM Bug #2590: "get missing taxa" search
- (N1-C1)+(N2-C2) = N4-C4
- 12:15 PM Bug #2590: "get missing taxa" search
- Let's put an example here to make it clearer. Given one target county: C and 2 data sources: A and B.
For C's neigh... - 10:56 PM Bug #2624: 43. Paging through large families.
- that would solve the problem
- 11:16 AM Bug #2624: 43. Paging through large families.
- I am not quite sure about this requirement. My understanding is that when you click the "next" link, you wnat the nex...
- 10:53 PM Bug #2619: Systematic error in determination of nominals
- verified fixed
- 02:47 PM Bug #2619: Systematic error in determination of nominals
- fixed. same as 2627.
- 10:50 PM Bug #2627: Nominal concepts should not overlap Weakley concepts
- verified fixed
- 02:17 PM Bug #2627: Nominal concepts should not overlap Weakley concepts
- fixed
- 10:42 PM Bug #2598: 17. Apostrophes
- I assume this to be fixed - not sure where to check
- 01:36 PM Bug #2598: 17. Apostrophes
- fxied
- 10:41 PM Bug #2588: Specimen & Image lists should include infraspecific taxa
- Verified fixed
- 02:54 PM Bug #2588: Specimen & Image lists should include infraspecific taxa
- fixed. sent email to hinar asking update the server side classes.
- 11:47 AM Bug #2588: Specimen & Image lists should include infraspecific taxa
- fixed in http://152.2.14.231/website/NCFloraTest. Now it can query by concept.
- 10:38 PM Bug #2596: 15. Alphabetize synonyms
- verified fixed
- 12:54 PM Bug #2596: 15. Alphabetize synonyms
- fixed
- 10:37 PM Bug #2634: Data source description errors
- verified fixed
- 11:21 AM Bug #2634: Data source description errors
- fixed
- 10:36 PM Bug #2616: 35. Click on county
- verified fixed
- 11:03 AM Bug #2616: 35. Click on county
- dixed
- 10:34 PM Bug #2614: 33. Map source issues
- verified fixed
- 10:33 PM Bug #2612: 31. Specimen data (fix typo)
- verified fixed
- 10:32 PM Bug #2609: Erroneous assignment of ambiguous status
- Note that Acer negundo Weakley < Acer negundo nominal.
1. Given this relationship, the NCSU specimens should not be ... - 06:10 PM Bug #2609: Erroneous assignment of ambiguous status
- Rule: IF all children of A < or = some children of B THEN A<B
RKP: why not =OR<
Original Relationships:
1. Acer n... - 10:00 AM Bug #2609: Erroneous assignment of ambiguous status
-
Rule: IF all children of A < or = some children of B THEN A<B
Original Relationships:
1. Acer negundo var. negu... - 10:15 PM Bug #2607: 26. Misfunction on back-to-query button
- verified fixed
- 10:11 PM Bug #2605: 24. Search all counties in a state
- --all-- needs to move from the bottom of the list to the top
- 09:45 AM Bug #2605: 24. Search all counties in a state
- Fixed in the testing site: 152.2.14.231/website/NCFloraTest
This fix involves changes in the java servlet classes, wh... - 10:10 PM Bug #2601: Explanation of relationship symbols “>†and “<†reversed
- ok, i think
- 10:06 PM Bug #2581: Children should occur in map of parent
- Not yet fixed.
A search on Hymenocallis occidentalis has far fewer counties shaded than a seach on Hymenocallis occc... - 03:04 PM Bug #2581: Children should occur in map of parent
- Whether or not children taxa are included depends on whether or not relationships are made between the parent and its...
- 09:57 PM Bug #2613: 32. Trilliaceae (Missing)
- verified fixed
- 10:10 AM Bug #2613: 32. Trilliaceae (Missing)
- fixed
- 09:55 PM Bug #2625: 44. Bug resolved
- never a real bug here
- 09:55 PM Bug #2620: 39. Bug resolved
- never a bug here
- 09:41 PM Bug #2600: ID number on the specimen & images pages needs revision
- The problems seem to remain, particular with respect to images.
I will use examples based on Carya myristiciformis
... - 09:04 PM Bug #2639: Inferred relationships too broad
- In the case of a species with varieties in Weakley, we must deduce the relationship of the Weakley species-level taxo...
- 08:54 PM Bug #2595: 14. The search box pick list seems to work inconsistently for species with infraspecific taxa.
- bug verified fixed
- 08:39 PM Bug #2593: 12. On the Home page, the green color for "Other data sources" is not the same green
- Verified fixed
- 08:38 PM Bug #2592: 11. The "Home" button should probably be changed to something like “About†...
- verified fixed
- 08:36 PM Bug #2591: 10. Image thumbnails use large files
- verified fixed
- 08:33 PM Bug #2580: 1. Incorrect links to specimen images
- Verified resolved
- 02:45 PM Bug #2580: 1. Incorrect links to specimen images
- changed javascript codes to herbarium site. sent email to hinar asking him to update java classes. Before hinar updat...
- 07:28 PM Bug #2597: Display of cultivated records should be optional
- Xianhua reports this as fixed, but I cannot see anything changed (I checked on 152.2.14.231). I checked Carya illino...
- 01:04 PM Bug #2597: Display of cultivated records should be optional
- fixed
- 01:13 PM Bug #2623: 42. TaxonProgress updates
- I will work out this later with Lisa
- 11:11 AM Bug #2618: Server errors; incompatability with Windows 2000 OS
- I will go back to this multi-platforms and multi-browsers soppurt issue later. It works fine on my Windows XP IMB des...
11/03/2006
- 11:22 PM Bug #2640: Identify USDA species without county distribution where other spp in genus have distribution
- (In reply to comment #1)
> Plants-NC matches the Plants-Search list (where in NC) exactly, except it
> contains the ... - 11:18 PM Bug #2640: Identify USDA species without county distribution where other spp in genus have distribution
- (In reply to comment #1)
> > Plants-NC.txt = Results of request for a list of NC plants from PLANTS, done
> > today.... - 11:16 PM Bug #2640: Identify USDA species without county distribution where other spp in genus have distribution
- On Fri, 3 Nov 2006, Robert K. Peet wrote:
> Hi,
>
> The attached zip file contains 4 files.
>
> Plants-NC.txt = Resu... - 04:35 PM Bug #2642: QA: Keystroking efficiency additions
- backspace on the cover data form should go back to the previous entry in the current entry is not filled in.
- 04:25 PM Bug #2642: QA: Keystroking efficiency additions
- strata could also use some help in adding values when you press - in the base field, it shuold skip you to height so ...
- 03:53 PM Bug #2642 (Resolved): QA: Keystroking efficiency additions
- The Cover Data form is a bit tedious if you want to skip the module that you are in and get to the next. Perhaps Ctl...
11/02/2006
- 11:14 AM Bug #2641 (Closed): Split USDA into concept-based and nominal parts
- This bug supports the efforts devoted to bug #2640, where the county record data will be split into two sets reflecti...
- 11:09 AM Bug #2640 (New): Identify USDA species without county distribution where other spp in genus have distribution
- Look at PERSBOR s.s. with all those records for NC, SC, GA, AL that are
actually P. palustris. We need a solution.
...
11/01/2006
- 07:36 AM Bug #2639 (Closed): Inferred relationships too broad
- The Carya glabra example reveals a new bug. All of USDA and RAB map
as ambiguous. This should not be the case beca... - 07:35 AM Bug #2638 (New): Ambiguous records should have details of ambiguity clickable
- Discussion from Peter White with RKP responses:
> Makes we wonder if we need to parse the kinds of ambiguity. Is th... - 07:09 AM Bug #2637 (New): RAB records of nominal variety occurrences have incomplete name
- Weakley writes:
Note all the yellow RAB dots for Ilex longipes, when longipes is unambiguously mapped by RAB as deci... - 06:48 AM Bug #2636: Better labels for ambiguous occurrences
- Peter White writes:
I wonder if it should be Carya glabra AND/OR Carya ovalis. If the
record is based on lumping, b... - 01:35 AM Bug #2636 (Closed): Better labels for ambiguous occurrences
- This is an upgrade; not an error.
Ambiguous identifications have a legend entry that states the name that was foun... - 05:08 AM Bug #2610: 29. Sources of ambiguous records.
- I think this is a good idea. How difficult is Steve's proposed fix? I am a little concerned about the busy-ness iss...
- 02:17 AM Bug #2619: Systematic error in determination of nominals
- This is closely related to bug 2627. In both cases the key issue is that nominal concepts must be either > or = all ...
- 02:09 AM Bug #2627: Nominal concepts should not overlap Weakley concepts
- I reiterate that I think the definition of the nominal concept should be that concept that includes all the other con...
- 01:53 AM Bug #2617: 36. The Data Source tab
Seems like the programming would not be that hard if the current source page were maintained as a not visible page, ...
10/31/2006
- 09:51 PM Bug #2627: Nominal concepts should not overlap Weakley concepts
- The relationship of Weakley's concept to a nominal concept is inferred based on all possible relationships to the con...
- 09:37 PM Bug #2619: Systematic error in determination of nominals
- Not really. The reason is that there is relationship:
Carya ovata (Alan Weakley) < Carya ovata (FNA)
XIanhua - 09:25 PM Bug #2617: 36. The Data Source tab
- The legend is dynamically created by the server to reflect changes in data source selection. It is hard, if not possi...
- 09:17 PM Bug #2614: 33. Map source issues
- fixed
- 09:00 PM Bug #2612: 31. Specimen data (fix typo)
- Fixed
- 08:57 PM Bug #2607: 26. Misfunction on back-to-query button
- fixed
- 08:19 PM Bug #2601: Explanation of relationship symbols “>†and “<†reversed
- Fixed
10/30/2006
- 03:26 PM Bug #2634 (Closed): Data source description errors
- Two text errors on the data source description page.
1. The NCU description should be changed to read:
"Those sp... - 03:20 PM Bug #2633 (Closed): Remove search button from search page
- Including the “Search†button on the search page itself seems unnecessary and potentially confusing to users.
- 03:18 PM Bug #2618: Server errors; incompatability with Windows 2000 OS
- Seiberling reported "When using the Firefox browser, the map page gives an error message, “Unable to display MapSer...
- 03:11 PM Bug #2608: 27. Browser compatibility testing
- The specific part of this bug related to crashes has been incorporated in bug 2618 (= but 37).
However, this does no... - 03:03 PM Bug #2604: 23. County and state pulldowns
- Steve Seiberling reports:
The search page sometimes continues to be displayed for several moments after entering a ge... - 03:00 PM Bug #2581: Children should occur in map of parent
- There remains a pervasive and important problem that a map of a taxon does not necessarily include its children. Thi...
- 01:41 PM Bug #2632: How to store one module plots - no subplots?
- I vote to have only S for one module plots
- 11:48 AM Bug #2632 (Resolved): How to store one module plots - no subplots?
- We currently use subplots with our multiple module plots. This seems unnecessary for one module plots (such as level...
- 01:27 PM Bug #2617: 36. The Data Source tab
- 27 Oct 06 Peter White sent RKP an email as follows: " One question on the atlas, that probably has come up and will b...
10/29/2006
- 12:30 PM Bug #2600: ID number on the specimen & images pages needs revision
- Fixed
- 12:09 PM Bug #2595: 14. The search box pick list seems to work inconsistently for species with infraspecific taxa.
- Updated the weakley's concepts list
- 11:54 AM Bug #2593: 12. On the Home page, the green color for "Other data sources" is not the same green
- Fixed
- 11:48 AM Bug #2592: 11. The "Home" button should probably be changed to something like “About†...
- Fixed.
- 11:34 AM Bug #2591: 10. Image thumbnails use large files
- FIxed
- 11:12 AM Bug #2580: 1. Incorrect links to specimen images
- Fixed in testing site: http://152.2.14.231/website/NCFloraTest
- 11:09 AM Bug #2584: 3. "Ambiguous" CVS and NCNHP records mapped differently from other ambiguous records
In NCU flora (the website), different data sources (e.g. CVS, NCU) follow different concept standands (e.g. Weakley,...- 11:07 AM Bug #2581: Children should occur in map of parent
- In NCU flora (the website), different data sources (e.g. CVS, NCU) follow different concept standands (e.g. Weakley, ...
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