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From 09/25/2002 to 10/24/2002

10/24/2002

01:23 PM Bug #652: Bug when Canceling 'Create New Datatable..."
fixed by changing code in PackageWizardShell to just set existing MorphoFrame to
visible when Cancel button is pressed
Dan Higgins
09:05 AM Bug #645: Rename data set documents to metadata.html
The html file for data set renamed to metadata.html. And style sheet has
modified too. So the link will be correct
Jing Tao

10/23/2002

09:00 PM Bug #652 (Resolved): Bug when Canceling 'Create New Datatable..."
If the 'Data/Create New Datatable..." menu item is selected and the user then
hits the 'Cancel' button, an unwanted ...
Dan Higgins
08:51 PM Bug #651 (Resolved): need to add a sample dataset to Morpho distribution
We need to include a sample dataset with the Morpho distribution. I recommend
that we extend the previous one to inc...
Dan Higgins
07:00 PM Bug #642: Automatic update of config.xml needed when new version installed
Finished code to automatically upgrade the config.xml file for users. Now,
when you update the morpho version, you m...
Matt Jones
12:31 PM Bug #642: Automatic update of config.xml needed when new version installed
Definitely needed. Reassigning to jones. Matt Jones
04:13 PM Bug #650 (Resolved): Add Delete functionality for individual modules and data sets
Currently only entire datapackages can be deleted. We need the ability to delete
data files and individual metadata ...
Dan Higgins
03:55 PM Bug #649 (Resolved): Save Reminder when data table has been edited
A pop up window to remind the user to save/delete changes to a data table before
exiting would be good. (Comment fro...
Dan Higgins
03:54 PM Bug #648 (Resolved): Icons on left of search result not clear
Christy has indicated that icons on left side of Search results window are not
clear. (It is difficult to see the di...
Dan Higgins
03:49 PM Bug #647 (Resolved): fix access control triples in nrs and obfs packages
Some current packages fail to provide a triple link for the access control
document itself, so nobody but the owner ...
Matt Jones
03:45 PM Bug #646 (Resolved): Window menu items need more specific names
The item added to the list that appears in the Windows menu should have more
specific names, especially for dataset ...
Dan Higgins
02:32 PM Bug #645 (Resolved): Rename data set documents to metadata.html
Now after exporting a datapakcage, we get a html file for every xml module.
The html files named by there doocid. S...
Jing Tao
12:57 PM Bug #609: Test Morpho to insure it runs under Java 1.3 (Mac OS X)
The problem with too many files has apparently been fixed. Still a potential
issue with popup menu in datatable.
Dan Higgins
12:41 PM Bug #644 (Resolved): MetaView Navigation and Entity/Attribute Links: top versus side display
1) The package level metadata view should not contain any links to
sub-Entity-level metadata (i.e. it should contain...
Matthew Brooke
12:30 PM Bug #422: fix export functionality
Need to deal with Comment #5 where it was requested that data files be renamed
as they were originally when the data ...
Matt Jones
11:27 AM Bug #504: incorrect rendering of eml-physical in xml editor (eml Beta6)
not a common problem since eml-physical usually not edited by user - moved to 1.3 Dan Higgins
11:16 AM Bug #469: minimize size of final distribution
Develop list of files that are not needed, and if everyone agrees, then delete them. Matt Jones
08:19 AM Bug #639: Problem adding data to a package
Problems of adding data to a package fixed by making the "Create New
Datatable..." menu item 'smarter'. If there is n...
Dan Higgins

10/22/2002

08:00 PM Bug #643 (Resolved): "Login" and "Skip Login" Buttons shoudl be disabled when logged in
In the Login dialog (under "File-->Login/Logout"), the "Login" and "Skip
Login" Buttons should be disabled when use...
Matthew Brooke

10/21/2002

08:43 AM Bug #642 (Resolved): Automatic update of config.xml needed when new version installed
'config.xml' file now stored in the user's home directory. We need Morpho to
automatically update this file when a n...
Dan Higgins

10/18/2002

04:28 PM Bug #639: Problem adding data to a package
The problem with editing after a column has been added has been fixed by
ensuring that the proper delimiter string ha...
Dan Higgins
10:58 AM Bug #640 (Resolved): Problem trying to download very large data sets
Chris Jones reports that attempts to move very large data files from Metacat to
Morpho often apparently 'hang' after...
Dan Higgins

10/17/2002

03:14 PM Bug #639 (Resolved): Problem adding data to a package
If a package does not contain any data, and the add data menu item (Data menu)
is selected, there is a problem if on...
Dan Higgins

10/16/2002

03:17 PM Bug #631: text edit boxes in editor are missing in Installer version
Problem with installer was traced to catalog files (i.e. catalog director with
dtds) existing both in installed lib d...
Dan Higgins
01:34 PM Bug #631 (Resolved): text edit boxes in editor are missing in Installer version
Some text edit boxes are missing when the InstallAnywhere version of Morpho
1.2beta is run. (Christy is only one wit...
Dan Higgins
11:18 AM Bug #630 (Resolved): new xsl stylesheet needed for eml-attribute
A new xsl stylesheet is needed for eml-attribute so that the display on the
right of the morpho datapackage display ...
Dan Higgins

10/14/2002

01:31 PM Bug #419: DataPackage Wizard doesn't indicate that AttributeDomain is Required
The problem here is that the 'AttributeDomain' element in eml-attribute is
really a choice of one of three types of e...
Dan Higgins

10/11/2002

06:22 PM Bug #529: Status Bar SSL icon hidden in Mac OSX
added spacer, but it looks odd in non-mac L&F. Ultimately, need to detect OS and
do spacer only if Mac. Assuming thi...
Matthew Brooke
02:22 PM Bug #547: evaluate metacat/morpho synchronization
I can't find a problem here. Since it works for me, and we don't have a specific
description, I am marking as resolved.
Dan Higgins
02:08 PM Bug #507: error in saving qualityControl element of eml-protocol module
corrected a typo in the eml-protocol dtd (with included originator tag). This
apparently fixes the problem indicated ...
Dan Higgins
01:29 PM Bug #508: Edits to CHOICE elements in eml-attribute::attributeDomain not saved unless other choice elements empty
found logic error in DocFrame method which saves XML. Problem was in code which
tried to select the node choice based...
Dan Higgins

10/10/2002

02:40 PM Bug #609: Test Morpho to insure it runs under Java 1.3 (Mac OS X)
Most of Morpho seems to run fine on a Mac OSX system.
Two exceptions have been noted:
1) The popup menu in the data ...
Dan Higgins
02:16 PM Bug #506: Changes to "Originator" lost when editing eml-software
DTD for the eml-software module contained a typo for the originator element that
did not allow multiple choices. The ...
Dan Higgins

10/09/2002

11:26 AM Bug #623: null pointer exception when canceling editor
found bug in MetaDisplay class which had 'editingComplete' rather than
'editingCanceled'
Dan Higgins
10:56 AM Bug #623 (Resolved): null pointer exception when canceling editor
Bringing up the metadata editor and then clicking cancel will cause a null
pointer exception when the information in...
Dan Higgins

10/07/2002

03:57 PM Bug #476: Instructions are truncated in Morpho Editor
Panel for displaying help instriuctions changed to be dynamically sized based on
length of help string.
Dan Higgins
01:50 PM Bug #438: Intermittent Version Numbering Problem
I have been unable to recreate the problem as described with the current version
of Morpho (10/7/2002). I think we ha...
Dan Higgins
01:42 PM Bug #205: cut/copy/paste
Cut/Copy/Paste menus are now enabled/disabled properly in the new DataPackage
view. Actually, the only items that ca...
Dan Higgins

10/04/2002

05:37 PM Bug #453: Update itislib functionality to use new information
I got one species "Pelvetia canaliculata" and it has a synonym "Fucus
canaliculatus" in ITIS.
I create two new pack...
Jing Tao
03:59 PM Bug #621: XML Editor changes do not result in datapackage update
Bug was due to fact that no EditingCompletedListener has been set got the
Metadisplay objects! Added code in DataView...
Dan Higgins
08:41 AM Bug #621 (Resolved): XML Editor changes do not result in datapackage update
Currently, one can bring up the XML editor and make changes but when the editor
is closed the changes do NOT result ...
Dan Higgins

10/03/2002

04:05 PM Bug #603: XSLT works only under JRE1.4
The problem to cause the exception is in stylesheet itself.
In apply-templates element, some file use select="./" or...
Jing Tao
03:27 PM Bug #499: Swing changes outside the event thread
All the SwingWorker instances have been examined to look for Swing component
changed outside the event thread and any...
Dan Higgins
11:17 AM Bug #499: Swing changes outside the event thread
fixed 'morphoFrame.setBusy(true)' so that the actual changing of the busy icon
is always done inside the event thread...
Dan Higgins
11:33 AM Bug #610: verify/fix problem with importing comma and tab delimited data
The problem with tab delimited data has apparently been fixed.
Fixed format data is NOT handled by the TextImportWiz...
Dan Higgins
11:29 AM Bug #620 (In Progress): Data Files with fixed width fields are not handled
Fixed Field data files are not handled in either the TextImportWizard or the
DataViewer classes. Thus metadata must ...
Dan Higgins
07:53 AM Bug #617: After updating a data file, entity, attribute and physical document version is not consistent in local and metacat
Documents were being incorrectly written to metacat dus to readers not being
reset to beginning of stream after writi...
Dan Higgins

10/02/2002

01:45 PM Bug #613: verify/fix synchronize/export/delete for data package window
Now synchronize, delete, export and openPreviousVersion menu worked well in
data pakcage frame too.
Now MorphoFrame...
Jing Tao
01:06 PM Bug #615: Tab delimiter problem after clicking update butto
bug in writeObjects method of PersistentVector fixed to convert delimiters in
hex format to proper format for data fi...
Dan Higgins
11:15 AM Bug #535: screenshots and UML design for new UI
Some screen shots and collaboration diagrams are in the morpho/docs/dev
directory. Additional documentation would pro...
Dan Higgins
11:10 AM Bug #499: Swing changes outside the event thread
10/2/02 - higgins
According to the Java tutorial,
Rule: Once a Swing component has been realized, all code that mi...
Dan Higgins
08:18 AM Bug #612: remove all metacat terminology
Carried out a global search for 'metacat' across all Morpho source files and
replaced all instances of 'metacat' that...
Dan Higgins

10/01/2002

04:44 PM Bug #617 (Resolved): After updating a data file, entity, attribute and physical document version is not consistent in local and metacat
When I created new data package, local and metacat has same version(1)in each
file.
Howerver, if data file was c...
Jing Tao
11:49 AM Bug #604: Right-click in DataView Clears Selection
mouse listener changed to not change the current selection Dan Higgins
11:18 AM Bug #605: When Trying to Resize Columns in Dataview, Column Becomes Selected
moved MousePressed handler code for header to appear in MouseClicked event. This
allows column size settings to be ca...
Dan Higgins
10:27 AM Bug #459: extend Wizard actions of TextImport Wizard
changing target milestone to 1.3 since this change would involve a fair amount
of new code.
Dan Higgins
10:18 AM Bug #616: Enable and diable bug in local frame
In util package, a interface named StoreStateChangeEvent was created. There
are 3 methods: storingStateChangeEvent, ...
Jing Tao

09/30/2002

02:24 PM Bug #613: verify/fix synchronize/export/delete for data package window
*** Bug 422 has been marked as a duplicate of this bug. *** Jing Tao
01:50 PM Bug #613 (Resolved): verify/fix synchronize/export/delete for data package window
When Morpho is displaying a package, several of the menus that work for the
result set window should also work for t...
Matt Jones
02:24 PM Bug #422: fix export functionality
I think this bug is redundant to bug 613. So I mark it as duplicate.
*** This bug has been marked as a duplicate o...
Jing Tao
01:57 PM Bug #422: fix export functionality
Also make sure synchronize and delete works in data package frame.
Jing Tao
12:10 PM Bug #422: fix export functionality
also make sure it works i the data package frame Matt Jones
02:16 PM Bug #616: Enable and diable bug in local frame
Change the milstone from postphone to 1.2
Jing Tao
02:12 PM Bug #616 (Resolved): Enable and diable bug in local frame
If a GUIAction was assigned only response to local frame. Sometimes it could
response correctly.
This is because...
Jing Tao
02:04 PM Bug #615 (Resolved): Tab delimiter problem after clicking update butto
In data table, if this data file's delimiter is tab and you click update
button, the all data will go to first colu...
Jing Tao
01:56 PM Bug #614 (Resolved): save menu item for user-initiated saves
Currently, various buttons in the Morpho UI cause individual files to be saved
and a new version of the file and pac...
Matt Jones
01:54 PM Bug #546: data editing enhancements
Basically, all the planned changes except for annotation of data changes have
been implemented (and the low level cha...
Dan Higgins
01:52 PM Bug #546: data editing enhancements
Basically, all the planned changes except for annotation of data changes have
been implemented (and the low level cha...
Dan Higgins
01:48 PM Bug #612 (Resolved): remove all metacat terminology
Morpho still has portions of the UI that refer to Metacat -- need to change this
to "Network" terminology instead.
Matt Jones
01:46 PM Bug #611 (Resolved): rewrite help documentation
The current version of Morpho (pre-1.2) has been changed substantially enough
that all of the help documentation is ...
Matt Jones
01:41 PM Bug #610 (Resolved): verify/fix problem with importing comma and tab delimited data
Jing reported a problem importing tab delimited data in Morpho. We used to have
a problem importing comma delimited...
Matt Jones
01:38 PM Bug #267: Add schema support to Morpho XML editor
Now that we are hoping to use the Jalam editor in Morpho, this XML Schema
support can be built into that. Thus, I'm ...
Matt Jones
01:37 PM Bug #609 (Resolved): Test Morpho to insure it runs under Java 1.3 (Mac OS X)
Make sure that Morpho runs on the Macintosh platform under OS X (i.e. Java 1.3). Dan Higgins
01:35 PM Bug #512: Cannot run morpho under JDK1.1.8
Primary reason for support for Java JRE 1.1.8 is for Macintosh OS 9. Apple is
strongly pushing for adaption of OS X w...
Dan Higgins
01:31 PM Bug #462: move the location where eml-physical docs appear in Morpho interface
issue has been resolved with new UI for displaying datapackages. Dan Higgins
01:30 PM Bug #532: data-oriented UI display
New UI interface for datapackage display has been implemented. Dan Higgins
01:29 PM Bug #211: Data entity editor and display
Current CVS version of Morpho addresses the issues described here. Dan Higgins
01:27 PM Bug #569: enabling/diabling menus and toolbars in MorphoFrame
DONE. Menus now converted to use new system. Marking enhancement as FIXED. Matt Jones
01:27 PM Bug #533: new File|Open to accomodate new UI design
File|Open dialog is in morpho now. It looks as same as our design and
functionalities works fine.
Jing Tao
01:25 PM Bug #439: Table Popup menu options should also appear in application menu
Menuitems in popup menu now are all in the menu in morphoframe
Jing Tao
01:22 PM Bug #356: resolve icon usability issues
New icons is no the morpho now.
Jing Tao
01:20 PM Bug #342: display metadata file timestamps
Now, in result panel (both in open dialog and search result frame) there is
item named last modified to show the tim...
Jing Tao

09/28/2002

09:51 AM Bug #607 (New): MetaViewer Focus Functionality
Need to implement nested mouse listeners to check for focus, generate focus
statechange and change border color appr...
Matthew Brooke
09:50 AM Bug #606 (Resolved): MetaViewer Path Display/Navigation Needs to be Finished
Support classes for Path display in header area currently in place, but actual
display and associated method of navi...
Matthew Brooke
09:43 AM Bug #605 (Resolved): When Trying to Resize Columns in Dataview, Column Becomes Selected
In the header row of the data table, if the user tries to drag the separators to
make the columns wider/narrower, th...
Matthew Brooke
09:36 AM Bug #604 (Resolved): Right-click in DataView Clears Selection
If a user selects a set of cell sin the dataview table, then right-clicks on the
selection to get a popup menu (e.g....
Matthew Brooke

09/27/2002

08:00 PM Bug #603 (Resolved): XSLT works only under JRE1.4
Full XSLT styling in the MetaViewer panes (which pulls XSLT from a jar file)
works only if running under JDK1.4. In...
Matthew Brooke

09/26/2002

03:35 PM Bug #569: enabling/diabling menus and toolbars in MorphoFrame
New menu system based on the propagation of StateCHangeEvents has been designed
and implemented. Menus are now creat...
Matt Jones
 

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