Activity
From 01/15/2008 to 02/13/2008
02/13/2008
- 06:29 PM Bug #3147 (Resolved): Get rid of Swing componets in Ecogrid data access classes
- Here is an email from Matt:
Jing,
I noticed you're having difficulty with calling the ecogrid data access class...
02/12/2008
- 04:46 PM Bug #3132: Once an EML dataset gets an error in downloading, cache interface will keep getting same error
- In src/org/ecoinformatics/seek/datasource/EcogridDataCacheItem.java class, a cleanUpCache method was added. So if the...
- 03:54 PM Bug #2962: Add metadata to data tokens so that it can be used downstream
- To address axis labeling (and any alternate naming for R objects for that matter), the RExpression now sets a "name" ...
- 03:21 PM Bug #2965: Ability to easily concatenate identical data structures (EMLDatasource)
- While this approach may not be what was initially intended when this enhancement was requested, the RExpression actor...
- 03:13 PM Bug #2959: Need for Multiport input for RExpression actor
- I've added a demo workflow that illustrates the use of multiports (both input and output) and am working with Kirsten...
02/11/2008
- 01:51 PM Bug #3144 (Resolved): add link in OSX Applications folder
- This bug is spawned from bug 3119. We need to figure out how to put a shortcut into the Applications folder on osx.
- 01:50 PM Bug #3119: Need Installer shortcuts for Windows
- I'm going to close this bug and open another for osx since this is now fixed for windows.
- 12:54 PM Bug #3119: Need Installer shortcuts for Windows
- Simply copying the kepler.app to the Applications directory will not work (due to some relative paths). To make the $...
- 12:42 PM Bug #3119: Need Installer shortcuts for Windows
- I think we just copy the .app to the /Applications directory. Then users can drag it to the doc. that's what usuall...
- 12:23 PM Bug #3119: Need Installer shortcuts for Windows
- I am not sure what 'shortcuts' mean for the Mac (an icon on the desktop?). Apparently, shortcuts for the Mac is NOT s...
- 12:11 PM Bug #3119: Need Installer shortcuts for Windows
- dan got this working for windows. need to add it for the mac.
- 01:45 PM Bug #2964: Change RExpression plotting actors to allow custom axis and title labels
- using R "attributes" of objects, we can add some metadata to the variables as the tokens are made available in R.
In ... - 12:26 PM Bug #3143 (New): dataFrame_R cache problem under parallels
- I'm currently getting the following error with the demos/R/dataFrame_R.xml workflow when trying to run it under Paral...
02/09/2008
- 02:24 PM Bug #2959: Need for Multiport input for RExpression actor
- The latest incarnation is to put any multiport input into an R list. The list variable name is the name of the input...
02/08/2008
- 11:11 AM Bug #2959: Need for Multiport input for RExpression actor
- The RExpresion actor should definitely not depend on upstream port names, because that makes the script non-portable ...
- 10:09 AM Bug #2959: Need for Multiport input for RExpression actor
- A note on variable naming conflicts:
-Take the case of 2 EML actors sitting upstream from an RExpression actor. Both... - 11:05 AM Bug #2321: merge exp files into ptolemy CVS
- PortEvent and PortEventListener have been renamed.
- 09:05 AM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- included in RC1 - retarget
- 08:41 AM Bug #3053: Multiple Documentation windows not possible
- this is part of RC1 - retargeting
- 08:40 AM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- this is part of RC1 - retargeting bug
02/07/2008
- 04:14 PM Bug #2959: Need for Multiport input for RExpression actor
- I propose (and have made the modification locally) that an RExpression actor with a multi port should:
1. handle inpu... - 03:26 PM Bug #3123: Change icons to be kepler specific
- dan fixed this. both mac and windows launchers now have the green K icon.
- 03:21 PM Bug #3134: demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- After Edward and Christopher fixed the bug, I rearranged the windows and resaved the workflows. They all open with t...
- 02:45 PM Bug #2937: Differentiate error msg between broken dataset links and insufficient access
- this is related to bug 3132 in that data download errors are not self correcting.
- 02:35 PM Bug #2961: Include option in EMLDatasource actor to use 'most recent' data
- this change has been included in RC1
- 02:33 PM Bug #2939: Add ability to access password protected EarthGrid data from within Kepler
- This has been included with RC1 and the Ecogrid-1.0.0 upgrade
- 02:25 PM Bug #3131: R is not added to the path
- R is now added to the path on windows. We are not including the R installation for the mac or linux installer so i'm...
- 12:02 PM Bug #3140 (Resolved): RBNBToKepler2 actor output port generation problem
- This actor is having problems dealing with output port generation when pointed at "niagara-dev.sdsc.edu:3333" (an sds...
- 11:54 AM Bug #3039: EML2 Datasource (from search) does not include Documentation
- Spoke with chad b. about this - it would be better if object instantiation did not circumvent the actor library cache...
- 10:14 AM Bug #3138 (Resolved): remove the distributed options menu item for 1.0 release
- We are not going to support distributed computing in 1.0 so the menu option should be removed for the release.
02/06/2008
- 04:14 PM Bug #3134: demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- Edward fixed this bug in several files today
2008-02-06 15:55 eal
* ptolemy/actor/: gui/AbstractPlaceableA... - 10:24 AM Bug #3039: EML2 Datasource (from search) does not include Documentation
- Got it working so that when EML Datasource actors are added to the search results, documentation is added to them bas...
02/05/2008
- 07:51 PM Bug #3129: links exist to ptII demos that do not work
- I looked into this, and I think the problem is that I was running out
of memory, see http://bugzilla.ecoinformatics.o... - 06:47 PM Bug #3129: links exist to ptII demos that do not work
- If you tell me what demos to exclude, I can update
completeDemosPtinyKepler.htm in the rel-7-0-beta-2 branch and the... - 01:18 PM Bug #3129 (Resolved): links exist to ptII demos that do not work
- There are links in the documentation for kepler to ptII demos that don't work. These demos need to be pulled out. T...
- 06:50 PM Bug #3127: workflows can open off the screen
- BTW - There is some code in Ptolemy that does this, see
2007-08-21 12:14 cxh
* ptolemy/actor/gui/WindowPro... - 06:22 PM Bug #3134: demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- It looks like saving the location of the Display window is broken
in Ptolemy II 7.0.beta, so it is likely broken in K... - 02:36 PM Bug #3134: demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- We seem to have lost the ability to save the position of output windows. I move the windows, then resave the workflo...
- 02:12 PM Bug #3134: demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- same with 06-webServicesAndDataTransformation.xml
- 02:06 PM Bug #3134 (Resolved): demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resaved
- The windows were saved over top of one another. If they are tiled, then resaved, it will be easier for people to see...
- 05:06 PM Bug #3039: EML2 Datasource (from search) does not include Documentation
- I've been looking at this for a bit.
My plan was to look up the EML actor that is in the component library (it contai... - 02:50 PM Bug #3118: remove "Add" button from data Sources dialog
- As part of RC1, we've removed (comment out) the Add button from the GUI. All the other underlying code for searching...
- 02:44 PM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- Endpoints are now automatically refreshing from the registry when a user first goes to the Data search tab. This sti...
- 02:08 PM Bug #3135 (Resolved): semantic type and class params need special handling in doc window
- When a documentation window opens, it needs to be made aware that the SemanticType and class attributes of an actor s...
- 02:02 PM Bug #3131: R is not added to the path
- The error is actually with the ExternalExec actor in the 08-CommandLine_2.xml demo. It tries to call R on the comman...
- 01:51 PM Bug #3131: R is not added to the path
- *** Bug 3133 has been marked as a duplicate of this bug. ***
- 01:40 PM Bug #3131: R is not added to the path
- You should not need to add R to the path if it is installed with the installer. If the R.zip is installed inside $KEP...
- 01:31 PM Bug #3131 (Resolved): R is not added to the path
- The errors cxh got with R seem to be coming from the fact that R is installed, but not put into the path on windows. ...
- 01:51 PM Bug #3133: R is not added to the path
- accidentally submitted this twice.
*** This bug has been marked as a duplicate of bug 3131 *** - 01:50 PM Bug #3133 (Resolved): R is not added to the path
- The errors cxh got with R seem to be coming from the fact that R is installed, but not put into the path on windows. ...
- 01:46 PM Bug #3132 (Resolved): Once an EML dataset gets an error in downloading, cache interface will keep getting same error
- Somehow if an EML dataset can't get data from ecogrid server (e.g. a network glitch), kepler system will keep getting...
- 01:28 PM Bug #3130 (Resolved): Add an accelerator (keyboard shortcut) for opening a new blank workflow
- Add an accelerator for opening a new blank workflow canvas (File => New Workflow => Blank).
Unless 'n' is taken I ... - 11:58 AM Bug #3128 (Resolved): Kepler devel tree can't be compiled in java 1.6.0: DBConnection problem
- Christopher Brooks reported he couldn't compile the src code -
When I run:
export KEPLER=c:/Kepler/kepler-1.0.0... - 10:02 AM Bug #2967: Add a 'View data' menu to data source actors
- The "Preview" action on the EMLDatasource handles the features requested in this bug.
Preview is available starting i... - 09:54 AM Bug #2966: Add a 'Preview data' menu to data source actors
- this change has been included as part of 1.0.0RC1
additional bugs have been reported in a different bugzilla entry. - 09:44 AM Bug #3125: Preview actor issues with EMLDatasource
- Fixes for the issues:
1. Reworked the initialize()/fire() methods for the "As Column Vector" and "As Column Based Rec...
02/04/2008
- 01:29 PM Bug #3127 (Resolved): workflows can open off the screen
- When a workflow is saved, the screen coords of where the window is are also saved. If the screen it was saved on was...
- 01:15 PM Bug #1838: need user level documentation
- User documentation has been created and is now part of the kepler release. any further bugs about this issue should ...
- 01:02 PM Bug #1838: need user level documentation
- retarget to 1.0
- 01:04 PM Bug #2531: The link from Kepler intro page to the Ptolemy quick links page is broken
- retarget to 1.0
- 01:03 PM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- retarget to 1.0
- 01:03 PM Bug #3026: Actor documentation does not appear in older workflows
- retarget to 1.0
- 09:52 AM Bug #3126 (Resolved): add R system installation to the Mac installer
- The R system is installed under windows as an option, but not under MacOS X. We need to add this so that Mac users c...
02/01/2008
- 06:13 PM Bug #3125 (Resolved): Preview actor issues with EMLDatasource
- Behavior for this action is inconsistent.
1. Previewing when the output format is set to "As Column Vector" shows no... - 05:27 PM Bug #3124 (Resolved): Automatically refresh ecogrid sources (endpoints) once per Kepler
- Now that there are two ways in which to refresh the available Ecogrid services (as registered in the registry), the r...
- 03:59 PM Bug #3119: Need Installer shortcuts for Windows
- Information is in IzPack documentation on shortcuts.
Also see as an example
IzPack\src\dist-files\shortcutSpec.xml - 10:58 AM Bug #3119 (Resolved): Need Installer shortcuts for Windows
- Shortcuts for the IzPack installer system have not yet been implemented, although it is possible to create such short...
- 03:54 PM Bug #3123 (Resolved): Change icons to be kepler specific
- Icons installed by the kepler installer need to be the kepler icons instead of the generic ones.
- 03:34 PM Bug #3122 (Resolved): Get installer size down
- Currently with documentation, the installer jar file is 174MB. We need to go through and make sure everything in the...
- 11:02 AM Bug #3052: Installer crashes with EXC_BAD_ACCESS
- This bug is now invalid with the use of the new IzPack installer system
- 10:49 AM Bug #1334: need installer for kepler
- IzPack installer system that is open-source and uses ant has been implemented and is in build.xml ant file.
Thus, cl... - 02:20 AM Bug #3118 (Resolved): remove "Add" button from data Sources dialog
- The data Sources dialog (accessible from the Search pane) has been updated to include a 'Refresh' function that obsol...
- 02:14 AM Bug #3030: Documentation says that kepler is version 1.0.0alpha8
- Fixed by removing this reference to the version number.
- 02:13 AM Bug #3030: Documentation says that kepler is version 1.0.0alpha8
- I removed this from the documentation page. Now the welcome screen is the only place that displays the version numbe...
- 02:08 AM Bug #1838: need user level documentation
- Documentation needs to be packaged as PDFs for the RC1 release and the links for the User Guide and Actor Reference m...
01/31/2008
- 06:09 PM Bug #3117: The refresh button function in source window was messed up by a KeplerSlaveNode entry in the registry
- added exception handling when merging registry list so that invalid entries do not invalidate the entire operation
- 05:28 PM Bug #3117 (Resolved): The refresh button function in source window was messed up by a KeplerSlaveNode entry in the registry
- By accident, I left a KeplerSlaveNode entry in the ecogrid registry. However when click refresh button in source wind...
- 02:31 PM Bug #3097: incorrect classpath in generated ptexecute.sh and momlexecute.sh
- crawl will check in fixes after RC1
Dan Higgins - 02:10 PM Bug #3115: Need to check Kepler for memory leaks
- This thread concerning memory leaks might be of use:
Jackie wrote:
I narrowed down the memory leak a bit and found ... - 01:04 PM Bug #3115 (Resolved): Need to check Kepler for memory leaks
- Need to do some testing to see if Kepler memory leaks occur (i.e. does memory use increase even when workflows closed...
- 02:07 PM Bug #3107: http links don't work: Unsupported file type or connection not supported
- moving to 1.0
- 02:07 PM Bug #2853: Documentation (where to save it; customization)
- moving to 1.0
- 01:54 PM Bug #3116: Web page rendering needs to be made w3c compliant
- This is really more of a Java bug than anything.
Ptolemy uses javax.swing.JEditorPane in actor.gui.HTMLViewer
In Pto... - 01:22 PM Bug #3116 (New): Web page rendering needs to be made w3c compliant
- The rendering engine used in ptII/kepler is about 10 years out of date. It gets confused on elements like end tags a...
- 01:43 PM Bug #3108: ENM GARP Baseline 3-Actor GARP - Browser Display demo fails with NameDuplication: convertTo?
- To replicate this,
1. ant run-dev
2. In the Welcome Window, click on "Getting Started"
3. This brings up kepler/con... - 01:01 PM Bug #3108: ENM GARP Baseline 3-Actor GARP - Browser Display demo fails with NameDuplication: convertTo?
- I cannot figure out just what workflows the errors reported correspond to. e.g 'Baseline 3-Actor GARP -Browser Displa...
01/29/2008
- 04:59 PM Bug #3106: Out of memory while opening all demos, is -Xss5m or SVG the problem?
- I did an experiment under Windows with Java 1.5.0_14 where I changed
-Xmx and -Xss and then used the about: facility ... - 10:59 AM Bug #3106: Out of memory while opening all demos, is -Xss5m or SVG the problem?
- As I remember, the -Xss5m switch was included because setting the stack memory this way was needed to insure that sev...
- 04:20 PM Bug #3110: Can't access actors via http
- Sorry, I hit return too quickly.
Kepler cannot access MoML actors defined remotely.
The same model works fine in Pto... - 04:14 PM Bug #3110 (Resolved): Can't access actors via http
- ptolemy.kernel.util.IllegalActionException: Cannot find class: Waveform
Because:
-- ptolemy.eecs.berkeley.edu
-- X... - 03:15 PM Bug #3078: No documentation for the 'SSH to Execute' actor
- I added docs to the MOML files for several SSH actors and made some modifications to existing docs to improve readabi...
- 11:34 AM Bug #3109: Many demos linked to getting started don't work
- removed two links. one to the PIW workflow which no longer has a web service and one to the Grass->ARC test that no ...
- 10:56 AM Bug #3109 (Resolved): Many demos linked to getting started don't work
- We need to either fix or remove the links from introScientist.htm that won't load. many are the web service ones tha...
- 10:19 AM Bug #3105: Getting Started link on Welcome Page should lead to demos
- i changed the link to introScientests.htm. Tested it and it worked.
- 01:04 AM Bug #2531: The link from Kepler intro page to the Ptolemy quick links page is broken
- Ok, I spent a little time tuning up the demos.
- The Kepler configuration now includes _classesToRemove, which is an
...
01/28/2008
- 10:25 PM Bug #3108 (Resolved): ENM GARP Baseline 3-Actor GARP - Browser Display demo fails with NameDuplication: convertTo?
- The problems below are probably common knowledge, but I've fixed up
the "about:" facility so that it will traverse t... - 09:39 PM Bug #3107 (Resolved): http links don't work: Unsupported file type or connection not supported
- Under Java 1.5.0 and Windows XP, if I try to click on a http: link
in an html window, I get:
Unsupported file ... - 08:54 PM Bug #3106 (New): Out of memory while opening all demos, is -Xss5m or SVG the problem?
- I'm marking this as having a target milestone of 1.0.0rc1 because
I suspect we should remove -Xss5m from build.xml b... - 04:24 PM Bug #3072: Security issues with distributed execution
- Its the ability to use the command line actor (for access to various custom simulation models) and the scripting acto...
- 03:52 PM Bug #3072: Security issues with distributed execution
- Ptolemy is reasonably well set up to use the Java sandbox, see $PTII/doc/sandbox.htm for details.
The sandbox has fa... - 04:19 PM Bug #3105 (Resolved): Getting Started link on Welcome Page should lead to demos
- This might be old news, but I'll report it anyway.
When I start up Kepler, the "Welcome" window has a link "Gettin... - 03:58 PM Bug #2363: Move Actions out of BasicGraphController
- If we solve this bug and move more code out of
exp/ptolemy/vergil/basic/BasicGraphController.java, then it will be e... - 03:38 PM Bug #3056: unable to print output of Display actor
- The issue here is that the Display actor does not implement the Java
Printable interface
Display has an inner class ... - 02:12 PM Bug #2921: Way to temporarily comment out actors or connections
- I'll take this bug, which discusses that it would be nice to have
a way to temporarily disable an actor or connections. - 02:03 PM Bug #3078: No documentation for the 'SSH to Execute' actor
- There is no documentation in the moml file. I've written to Kirsten to see if we can get some.
- 01:59 PM Bug #2318: Copyrights and licenses of subpackages need to be handled
- FOSSology (http://www.fossology.org/) could help manage the copyrights.
However, installing it is not easy, it requir... - 01:19 PM Bug #2914: Broken link on a web page
- removed the link from the page.
- 01:11 PM Bug #3089: Actor port properties lost after saving to library
- There was a bug in ActorMetadata where ports get added to the namedObj. The port attributes were getting added to th...
01/26/2008
- 10:27 AM Bug #2321: merge exp files into ptolemy CVS
- I merged in several files from kepler into ptII.
See kepler/src/exp/expfiles-merge-notes.txt
To merge more files, Po...
01/25/2008
- 12:37 PM Bug #3094: File keyboard shortcuts use ctrl key instead of apple key on Mac
- The change Christopher mentions fixed Configure Actor, as mentioned in comment #3.
I have not been able to find any ... - 12:02 PM Bug #3094: File keyboard shortcuts use ctrl key instead of apple key on Mac
- I folded a change from Derek (via Chad) to ConfigurationAction.java
into the ptII tree.
If you are having problems w... - 10:48 AM Bug #2834: Incorrect Actor Icons
- added matlab icon and assigned it to the matlab actor
changed icon to "control" icon for the following:
exceptionCon...
01/24/2008
- 05:08 PM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- Sorry for the confusion on this.
I went ahead and moved the code into ptII.
Perhaps 3053 could be reopened at a lower... - 05:00 PM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- Darn! it was moved to pII. Undo! closing this bug (again).
(sorry about all the bugzilla emails) - 04:51 PM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- This is actually a bug for GetDocumentationAction (not Top). Reopening this one since apparently you _can_ have mult...
- 04:13 PM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- I'm closing this, as I've updated the Ptolemy II tree with the Kepler
version of Top. - 08:45 AM Bug #3099: GetDocumentationAction.java needs to be moved into pII source
- Transferring to Chad since he has write access to the pII project and has also edited this file previously (v1.32 on ...
- 05:01 PM Bug #3075: Fold Top,java file in $KEPLER/src/exp/ dir into Ptolemy src
- This was moved into the pII tree and removed from kepler's src/exp
cvs log entry:
brooks 08/01/24 16:12:38
... - 02:16 PM Bug #3075: Fold Top,java file in $KEPLER/src/exp/ dir into Ptolemy src
- I've reworked the Top file we have in our src/exp tree:
-Removed the use of the Configuration class within Top
-Added... - 04:49 PM Bug #3103 (Resolved): Building actor documentation from within Kepler fails
- If the actor documentation does not exist, then when I select
Documentation -> Display, a window comes up that allow... - 04:48 PM Bug #2712: Problem with EML2DataSource with extra cols in csv file
- There is now a new parameter in the EML Datasource actor for "Allow lenient data parsing"
When it is checked (true), ... - 03:26 PM Bug #2712: Problem with EML2DataSource with extra cols in csv file
- Well, being lenient with this example dataset works...until we get to a record with 2.5 in a column described as an I...
- 04:02 PM Bug #3053: Multiple Documentation windows not possible
- This bug seems to only affect Kepler and not Ptolemy?
If I open a model in Ptolemy, I can right click on an actor, se... - 09:56 AM Bug #3053: Multiple Documentation windows not possible
- entered a new bug (3099) that finishes what this one started.
- 03:57 PM Bug #3102: Inclusion of R executable for Mac and Linux ?
- duplicate
*** This bug has been marked as a duplicate of bug 3101 *** - 03:38 PM Bug #3102 (Resolved): Inclusion of R executable for Mac and Linux ?
- We included a set of R executables for Windows as of beta3 and plan on doing so also for RC1. However, we do not incl...
- 03:57 PM Bug #3101: Inclusion of R executable for Mac and Linux ?
- *** Bug 3102 has been marked as a duplicate of this bug. ***
- 03:34 PM Bug #3101 (Resolved): Inclusion of R executable for Mac and Linux ?
- We included a set of R executables for Windows as of beta3 and plan on doing so also for RC1. However, we do not incl...
- 01:20 PM Bug #2572: Export KAR can produce several actors with the same lsid
- I fixed this bug by detecting the lsid collision and asking the user if he/she would like to change the id of the com...
01/23/2008
- 06:20 PM Bug #3099 (Resolved): GetDocumentationAction.java needs to be moved into pII source
- Rather than maintain a copy of this class in the src/exp directory, it should be included in in the ptolemy project. ...
- 06:18 PM Bug #3094: File keyboard shortcuts use ctrl key instead of apple key on Mac
- The Accelerators for the File Menu for OS X, i.e.
* Open File
* Save
* Print
* Close
have been fixed.
Configur... - 11:05 AM Bug #3094: File keyboard shortcuts use ctrl key instead of apple key on Mac
- I'll work on this for bug day today.
- 06:13 PM Bug #3053: Multiple Documentation windows not possible
- Committed changes to:
src/exp/ptolemy/vergil/basic GetDocumentationAction.java
configs/ptolemy/configs/kepler configu... - 03:27 PM Bug #3053: Multiple Documentation windows not possible
- Change to allow multiple documentation windows at once would be in the pII source:
ptolemy.vergil.basic.GetDocumentat... - 02:03 PM Bug #3053: Multiple Documentation windows not possible
- taking a stab at this for bug day...
- 04:55 PM Bug #3093: Unit test org.nddp.TestCollectionIOPort does not compile
- I added (empty) addInitializable() and removeInitializable() methods required by the ptolemy.actor.Initializable inte...
- 04:51 PM Bug #3091: Warnings building org.nddp.DataTypes
- I added two type-casts suggested by the compiler, and this eliminated the warnings.
- 03:47 PM Bug #1334: need installer for kepler
- An open source installer package is made up of several packages, especially for use on Windows OSs. The various steps...
- 02:25 PM Bug #3098: Cannot drag SampleDelay actor onto canvas
- Was a problem with my checkout.
- 12:14 PM Bug #3098: Cannot drag SampleDelay actor onto canvas
- Dragging SampleDelay actor works for me under Windows with no error message at least immediately after startup
- 11:58 AM Bug #3098 (Resolved): Cannot drag SampleDelay actor onto canvas
- Dragging SampleDelay onto canvas brings up an error message:
Cannot create entity without a class name. in [extern... - 01:18 PM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- Refreshing the list of available services is working nicely locally - there's even an option to retain the existing (...
- 01:04 PM Bug #3083: Need sample CommandLine workflows for Windows
- Discovered the the problem could be reproduced when kepler was launched from kepler.bat or kepler.sh. Using the comma...
- 11:11 AM Bug #3083: Need sample CommandLine workflows for Windows
- Works for me under Windows and MacOSX
- 10:42 AM Bug #3083: Need sample CommandLine workflows for Windows
- I'm having trouble getting the CommandLine1 workflow to run on my PC/the latest nightly build (20081323). The workflo...
- 12:14 PM Bug #3097: incorrect classpath in generated ptexecute.sh and momlexecute.sh
- ClassPathHacker is the name given by the author to his class for dynamic classpath additions. Using the authors choic...
- 11:37 AM Bug #3097: incorrect classpath in generated ptexecute.sh and momlexecute.sh
- A class with the name 'ClassPathHacker' worries me a bit. I think we need a robust class loader that can work under a...
- 11:27 AM Bug #3097 (Resolved): incorrect classpath in generated ptexecute.sh and momlexecute.sh
- The scripts ptexecute.sh and momlexecute.sh generated by build.xml (v1.366)
do not have the jars in $KEPLER/lib/jar/... - 11:12 AM Bug #2933: Query Builder comparisons for strings, dates do not work
- This bug is closed and new bug to handle date type in data manager library will be added.
- 10:57 AM Bug #3090: ASC2RAWTest demo workflow error
- Cleaned up paths and changed the datasource to DirectoryListing. Workflow now executes on multiple platforms
- 10:03 AM Bug #3092: sampling_occurrenceData_ R.xml demo workflow
- changed file path to use propert("KEPLER") for cross platform comaptibility
- 08:46 AM Bug #3095 (New): add data mining actors (weka) and cheminformatics actors
- Joseph Maria requested the incorporation of data mining actors based on WEKA and cheminformatics actors based on CDK....
01/22/2008
- 05:57 PM Bug #2933: Query Builder comparisons for strings, dates do not work
- Dan tried to string comparison and it works for him. We talked this bug and think to close it in Kepler and add new b...
- 05:43 PM Bug #3094: File keyboard shortcuts use ctrl key instead of apple key on Mac
- The target design for menu and tool bars is here:
http://kepler-project.org/Wiki.jsp?page=MenuAndToolBarReDesign
He... - 05:40 PM Bug #3094 (Resolved): File keyboard shortcuts use ctrl key instead of apple key on Mac
- Unlike in View and Edit, File shortcuts use ^Key (ctrl+Key) instead of Apple^Key. These shortcuts include:
* Open... - 04:57 PM Bug #3093 (Resolved): Unit test org.nddp.TestCollectionIOPort does not compile
- The JUnit test org.nddp.TestCollectionIOPort does not compile, and has been renamed to TestCollectionIOPort.javaDISAB...
- 04:49 PM Bug #3092 (Resolved): sampling_occurrenceData_ R.xml demo workflow
- This demo workflow does not run properly because a hard-coded path is used for the file.
- 04:31 PM Bug #3091 (Resolved): Warnings building org.nddp.DataTypes
- Building Kepler yields two warnings with the message, "non-varargs call of varargs method with inexact argument type ...
- 04:18 PM Bug #3090 (Resolved): ASC2RAWTest demo workflow error
- When I try to run this workflow I get the java exception:
Cannot open file or URL in .ASC2RAWTest.Layer List Read... - 04:12 PM Bug #3089 (Resolved): Actor port properties lost after saving to library
- If I select an actor (e.g., Garp Prediction), add a semantic type to one of its input ports, and save it back to the ...
- 03:54 PM Bug #3086: Error with kepler20080122.zip version (PTII?)
- Problem now fixed with updated PTII
- 02:20 PM Bug #3086: Error with kepler20080122.zip version (PTII?)
- There was a change in diva.canvas.BasicZList.java (in PTII) on Jan 22 that is the apparent cause.
'throws NoSuchEleme... - 01:54 PM Bug #3086: Error with kepler20080122.zip version (PTII?)
- My bad. I was fixing FindBugs warnings.
Man-kit (Jackie) Leung fixed this in the
Ptolemy II tree.
I just checked in n... - 01:43 PM Bug #3086 (Resolved): Error with kepler20080122.zip version (PTII?)
- The nightly zipped version (kepler20080122) ends up having a recurring error shown in the terminal when the cursor is...
- 03:53 PM Bug #3083: Need sample CommandLine workflows for Windows
- Two new example CommandLine workflows added to $KEPLER/demos/getting-started.
- 11:29 AM Bug #3083 (Resolved): Need sample CommandLine workflows for Windows
- We need some simple examples of how to use the CommandLine actors especially for Windows systems. These should be in ...
- 01:28 PM Bug #2493: actor repository tracking bug
- the PutService for ecogrid-1.0.0 will include support for filenames. Metacat already handles this, so the download s...
- 11:48 AM Bug #2493: actor repository tracking bug
- This bug is currently blocked by 3084. Metacat and the grid interfaces need to be updated before this bug can be fix...
- 11:59 AM Bug #3077: Querybuilder: condition "operator" and "criteria" are not being saved
- This bug is duplicate to bug 3076.
In the OKAction.actionPeformed method in QBApp.java, a TableCellEditor.stopCellEd... - 11:59 AM Bug #3076: Need to hit 'Return" key to enter a Criteria in QueryBuilder
- This bug is duplicate to bug 3077.
In the OKAction.actionPeformed method in QBApp.java, a TableCellEditor.stopCellEd... - 11:22 AM Bug #1334: need installer for kepler
- Currently, the plan is to use the open source software Izpack and Launch4J for the next Kepler release. (also JarBund...
01/21/2008
- 01:32 PM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- As part of the upcoming 1.0.0 release [candidate], there are some substantial changes to the SEEK ecogrid and registr...
01/18/2008
- 04:08 PM Bug #3078 (Resolved): No documentation for the 'SSH to Execute' actor
- No documentation appear for the 'SSH to Execute' actor (org.sdm.spa.Ssh2Exec)
- 01:39 PM Bug #3077: Querybuilder: condition "operator" and "criteria" are not being saved
- See bug #3076
- 01:39 PM Bug #3077: Querybuilder: condition "operator" and "criteria" are not being saved
- from IRC:
[1:35pm] dan: when you add a criteria, you have to hit 'return'
[1:35pm] dan: just hitting OK won't work
[1... - 12:12 PM Bug #3077 (Resolved): Querybuilder: condition "operator" and "criteria" are not being saved
- When using the Querybuilder interface to construct queries on EML datasource actor, the condition[s] are not being sa...
- 12:17 PM Bug #2933: Query Builder comparisons for strings, dates do not work
- Although the transformation to the HSQL date format is a change, its probably going to be necessary for many systems....
- 10:58 AM Bug #2933: Query Builder comparisons for strings, dates do not work
- After changing the double quotes symbol to single quotes for string value in the query, the string comparison works n...
- 11:59 AM Bug #2940: Querybuilder with EMLDatasource actor does not return data
- Ben tried the workflow and it worked for him too.
- 11:25 AM Bug #2987: Kepler Library (actor repository) Issues
- 1 and 2 are fixed. the other two can be pushed to post 1.0
- 11:21 AM Bug #2978: saving to actor library from kepler no longer consistently works and port information is lost
- This is now fixed. It was caused when the actor library was rebuilt after an update. the actorLibrary entity was se...
- 10:20 AM Bug #2978: saving to actor library from kepler no longer consistently works and port information is lost
- I've verified that dan's way of reproducing this works. Not sure what the issue is.
- 11:07 AM Bug #3076 (Resolved): Need to hit 'Return" key to enter a Criteria in QueryBuilder
- You must hit the return key to force an entry in the Criteria column of the QueryBuilder. If you just enter the crite...
- 10:35 AM Bug #1836: data search and access problems via ecogrid
- In 2008 workshop in New Mexico, the ecogrid search worked fine. Dan and I think we can close this bug.
01/17/2008
- 05:48 PM Bug #2940: Querybuilder with EMLDatasource actor does not return data
- This problem wasn't caused by multiple tables or single table. Actually there is a space in attribute name cause the ...
- 03:25 PM Bug #2490: Get ecogrid endpoints from Ecogrid registry
- My first sentence in comment #1 "...optionally retrieved at startup" is wrong.
I had it occurring at startup for awh... - 02:28 PM Bug #2978: saving to actor library from kepler no longer consistently works and port information is lost
- Problems can be seen if one follows this sequence:
1) Create a customized RExpression actor called Test1. Add to libr... - 12:59 PM Bug #3075: Fold Top,java file in $KEPLER/src/exp/ dir into Ptolemy src
- There is now a StringAttribute that set the default File|Open directory. So this file should be ready to move to PTII...
- 12:10 PM Bug #3020: Exporting an actor to a kar does not include internal jars
- When you export an actor to a kar file, it now asks you if you want to include the class file. if so, any associated...
01/16/2008
- 03:59 PM Bug #3075 (Resolved): Fold Top,java file in $KEPLER/src/exp/ dir into Ptolemy src
- Getting the FILE|Open menu to initially point to the $KEPLER/demos directory required a change to the PTII ptolemy/gu...
- 03:58 PM Bug #2935: MetadataSource actor has no documentation
- Documentation added to kar file moml
- 03:48 PM Bug #3074 (Resolved): Code library installation issues
- There are several issues with compiled code libraries (*.dll, *.so, *.dylib files) and where they must be located. Th...
- 03:00 PM Bug #3073 (Resolved): Heartbeat function for slaves
- When a slave registers itself with the earthgrid registry, there needs to be a way to tell if that slave still exists...
- 02:58 PM Bug #3072 (Resolved): Security issues with distributed execution
- See bug 3071. basically, the issues are that arbitrary code can be executed on the slaves so the utmost care needs t...
- 02:56 PM Bug #3071: KAR files should be sent along with workflow to slaves
- kar files should be signed so that the recipient at least can know that they are coming from who they should be.
- 02:55 PM Bug #3071 (Resolved): KAR files should be sent along with workflow to slaves
- When a master sends the workflow out to the slaves, it should also send any kar files that are needed for execution o...
- 02:54 PM Bug #3070 (Resolved): Need access control GUI for slaves
- Kepler needs a gui that allows a user to set access control rules for the local slave if it is running via the gui.
- 02:53 PM Bug #3069 (Resolved): start slave from gui
- A user should be able to start a slave controller from the gui instead of starting it from the command line. The com...
- 02:51 PM Bug #3068 (Resolved): rmiregistry should be started programmatically
- A user wanting to use the distributed system should not have to start the rmiregistry manually. kepler should start ...
- 02:41 PM Bug #2880: Problem with some commands in command line actor
- These commands now work using the CommandLineExec actor.
- 02:23 PM Bug #3026: Actor documentation does not appear in older workflows
- This has been fixed in many of the GettingStarted demos but not in all the workflows in the demos directory.
- 02:21 PM Bug #2914: Broken link on a web page
- Note that missing doc is on Ilkay's server
- 02:02 PM Bug #2990: file|open dialog should open in workflows directory
- File|Open now initially opens into the $KEPLER/demos directory and remembers where the last location was (until shut-...
- 01:25 PM Bug #2941: Command Line Exec Actor throws exception when given input on "arguments" port
- This has been fixed (as of CommandLineExec.java v1.9) and I've added some workflows to better test this actor.
- 01:22 PM Bug #2531: The link from Kepler intro page to the Ptolemy quick links page is broken
- Comment #3 about the Ptolemy links is certainly valid. There is the issue about making sure all the Ptolemy example w...
- 01:11 PM Bug #2531: The link from Kepler intro page to the Ptolemy quick links page is broken
- BTW - I think Kepler loses something by not having
the Ptolemy demos available. There are plenty of
demos and they ... - 12:01 PM Bug #2531: The link from Kepler intro page to the Ptolemy quick links page is broken
- The broken link was removed from the intro page.
- 10:50 AM Bug #3055: DarwinCoreDatasource actor does not work in wit output 'As Field'
- As Field and As Row setting now iterate through all the rows of the data
01/15/2008
- 07:54 PM Bug #2978: saving to actor library from kepler no longer consistently works and port information is lost
- Some preliminary tests indicated that the indicated problems occur when a second actor is added, after the first acto...
- 04:43 PM Bug #2978: saving to actor library from kepler no longer consistently works and port information is lost
- I'll have to check this out more. We just used this during the training workshop and this functionality worked well....
- 04:41 PM Bug #3066 (New): actor sdk
- We need an SDK for building actors so that it is easier for people writing new java actors. the SDK would include a ...
- 02:44 PM Bug #2833: 'Open' problem with new DarwinCoreDataSource actor
- Data is now downloaded when actor is first dragged to the work area, allowing access to the query builder
- 12:48 PM Bug #3054: Importing a kar file claims actor is already cached
- This is now fixed.
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