Activity
From 02/15/2010 to 03/16/2010
03/16/2010
- 04:31 PM Bug #4884: Trying to log into IPCC anonymously causes Kepler to freeze, and require a force quit.
- Could have been because I did have several workflows open ? I just tried it now, and was successful. Maybe we can c...
- 12:56 PM Bug #4884: Trying to log into IPCC anonymously causes Kepler to freeze, and require a force quit.
- Just tried this in the 2.0 branch and it worked for me. Debi, were there any other circumstances that could have con...
- 12:15 PM Bug #4884: Trying to log into IPCC anonymously causes Kepler to freeze, and require a force quit.
- On wrp trunk on mac 10.5 with kepler launched from eclipse with VM arg: -Xmx1500m, I have all datasources selected ex...
- 12:06 PM Bug #4884: Trying to log into IPCC anonymously causes Kepler to freeze, and require a force quit.
- I just tried to search "IPCC" on data tab (logged in anonymously), it worked fine to me. Can someone else make a try?
- 11:51 AM Bug #4884 (Resolved): Trying to log into IPCC anonymously causes Kepler to freeze, and require a force quit.
- If you do a search from the data tab for 'IPCC' and then try to log in anonymously, it looks like it is trying to con...
- 04:16 PM Bug #4761: install and configure SPAN software on gumstix
- Derik and I visited the SPAN group on March 8; they installed their software on our gumstix. Using CRBasic programs w...
- 02:35 PM Bug #4885 (Resolved): Right-clicking on KARs in the component pane produces exception
- This bug is there as of r23368.
Stacktrace follows:
[run] java.lang.Exception: LIID not found for CoreAct... - 01:54 PM Bug #3069: start slave from gui
- It is fixed at Kepler trunk version 23363. Slave will be started when using startSlave or startSlaveAsyn commands or ...
- 01:52 PM Bug #3068: rmiregistry should be started programmatically
- It is fixed at Kepler trunk version 23363. rmi registry will be done automatically when using startSlave or startSlav...
- 12:52 PM Bug #4864: Update paths in demo workflows
- All demo workflows have been updated. There is now a system property DEMODIR that can be used in workflows to get th...
03/15/2010
- 04:28 PM Bug #4517: Verify that the search capabilities work
- The debug message has gone when I tried to reproduced the issue on comment 3. I tried both kepler 2.0 and trunk. Ben ...
- 03:34 PM Bug #4883: Need more command line options for kar files
- created a stopgap soln in r23358 -- for headless for runs of kars, now writing resultant "run-kar" into KeplerData/wo...
- 01:51 PM Bug #4883 (New): Need more command line options for kar files
- right now, we can execute a single workflow contained in a kar file with the -runwf command line switch. It would be...
- 03:32 PM Bug #4744: load & save site layout to local kar file
- additional items to save in KAR: CRBasic program, SPAN config files
- 03:29 PM Bug #4743: create gui to edit documentation metadata for component
- It would be good to review the interfaces on the following web page when designing this interface:
https://kepler-pr... - 01:07 PM Bug #4745: load & save site layout to metacat
- save to metacat instead of dataturbine?
03/13/2010
- 04:34 PM Bug #4832: python actor outputting to disconnected composite output throws error
- This might be a bug in provenance. I'll take a look.
- 08:09 AM Bug #4832: python actor outputting to disconnected composite output throws error
- I took a look at this and confirmed that it is not a problem in Ptolemy or Kepler, but is reproducible in after doing...
03/12/2010
- 03:20 PM Bug #4877: The provenance recorder and tagging buttons on the toolbar need tooltips
- Fixed in r23341.
- 03:13 PM Bug #4773: Data processing on the GPP
- Also, part of the SPAN stack can do processing / QA/QC. To what extent do we want to utilize this? I currently consid...
- 02:01 PM Bug #4333: KeplerLSID AuthNamespace web service
- (In reply to comment #5)
> Alright https://kepler-project.org/ns/
> now works.
>
> http://library.kepler-project.or... - 12:51 PM Bug #4333: KeplerLSID AuthNamespace web service
- Alright https://kepler-project.org/ns/
now works.
http://library.kepler-project.org/ns/
is still returning an error... - 01:57 PM Bug #4847: Instantiating new actor from library gives error after restart
- Unable to reproduce this bug in the 2.0 branch and my Mac. Please reopen if you're still seeing it.
- 01:41 PM Bug #4072: Rework Section 3
- only thing left now is updating the screenshots.
- 01:40 PM Bug #4852: Documentation => Remove Customization doesn't work
- fixed in r23336 (trunk) and r23339 (2.0).
- 11:01 AM Bug #4872: listen to director throws error
- Oh, and it doesn't seem to cause any serious problems.
- 11:00 AM Bug #4872: listen to director throws error
- I'm also seeing something like this when I run, sometimes. I get:
java.lang.reflect.InvocationTargetException
... - 10:53 AM Bug #4881 (New): RExpression outputs [false] for any matrix of booleans
- In an RExpression, add an output port "out" and use this R script:
out <- matrix(c(TRUE, FALSE, TRUE, FALSE), 2)
... - 10:45 AM Bug #4880 (New): RExpression cannot output matrix of strings
- Create an RExpression with the output port "out" and for the script, use:
out <- matrix(letters, 2)
Looking at... - 10:37 AM Bug #4879 (New): RExpression replaces ) in string vectors with } when outputting to a port
- In an RExpression, create the output port "out" and in the R script, use:
out <- c("(", ")")
Hooking this to a...
03/11/2010
- 06:38 PM Bug #4852: Documentation => Remove Customization doesn't work
- I've got a local fix for this that seems to be working pretty well. I'm going to test it some more before check in.
- 05:16 PM Bug #4333: KeplerLSID AuthNamespace web service
- I've added
https://kepler-project.org/ns/
and
http://library.kepler-project.org/ns/
to the Kepler configuration in... - 04:31 PM Bug #4333: KeplerLSID AuthNamespace web service
- Added the namespace number generator jsp to the kepler skin in metacat at:
/style/skins/kepler/keplerAuthNamespac... - 03:27 PM Bug #4333: KeplerLSID AuthNamespace web service
- So
kepler-project.org
is the plone site, and metacat is on
library.kepler-project.org
If we drop the jsp page into t... - 04:37 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- Thanks Christopher. I updated kepler trunk to use ptolemy r57481 and made the required change to uiContextMenuMapping...
- 03:57 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- This bug:
Get Documentation on actor ports can give an NPE
https://chess.eecs.berkeley.edu/bugzilla/show_bug.cgi?i... - 04:29 PM Bug #4076: Rework Section 7
- With the Jargon.jar in Kepler, it can communicate with different SRB version. Since SRB has not been updated for two ...
- 04:25 PM Bug #4076: Rework Section 7
- update section 7 to explain more about SRB actors, which are still working when the host and resource server are runn...
- 04:18 PM Bug #4877 (Resolved): The provenance recorder and tagging buttons on the toolbar need tooltips
- The provenance recorder and tagging buttons, that are only present in certain suites, need tooltips like the other UI...
- 03:25 PM Bug #4876 (New): RExpression - recursively handle arrays
- Currently you can only have a list of lists - it would be nice to handle the Token->R->Token conversion recursively s...
- 03:14 PM Bug #4864: Update paths in demo workflows
- The installer now places the demos in ~/KeplerData/Kepler-2.0.0/demos. Paths should be updated to reflect that locat...
- 01:48 PM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- Edward and I talked about this and he reminded me that changes are actually
committed as you move between fields. I... - 11:39 AM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- > This happens when you just run Vergil:
> -drag a StringConst actor to the stage
> -edit the actor params
> -type so... - 10:22 AM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- Christopher,
The _handleClosing() method in ptolemy.actor.gui.EditParametersDialog
does not restore the values of ... - 10:08 AM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- It looks like there is some oddness in Vergil with edit parameters.
I'll see about taking a look. - 01:21 PM Bug #4873: Actors in repository library subtree are crammed together
- Roger that, works well, closing.
- 10:32 AM Bug #4873: Actors in repository library subtree are crammed together
- You probably know this, but you can use System.getProperty("os.name"); to fine the current OS for switching stuff lik...
03/10/2010
- 06:16 PM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- This happens when you just run Vergil:
-drag a StringConst actor to the stage
-edit the actor params
-type some value... - 04:16 PM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- You can get into trouble if you Edit the actor parameters then press other buttons (other than Cancel and Commit):
-H... - 02:41 PM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- from conf. call:
-verify that "cancel" does work for all normal cases
-isolate the sequence that caused the changes t... - 09:59 AM Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- It's that attributeChanged() method - I know the EML actor does a lot of things in that method, and I remember it bei...
- 04:55 PM Bug #4873: Actors in repository library subtree are crammed together
- I've added 2 pixels to the rowHeight of the AnnotatedPTree class. Now it would be nice to toggle this based on OS...
- 03:23 PM Bug #4874 (Resolved): Modify existing KARFile schema for use with KAR File Parser
- Currently, we have a simple KARFile schema, but it needs to be modified so that it can be used with the KAR File Pars...
- 02:24 PM Bug #4517: Verify that the search capabilities work
- Need to look at the print out on the console when we search and download data on ecogrid.
- 02:00 PM Bug #4072: Rework Section 3
- in r1179 - finished going through all of this section, fixed some typos, figure numbers and so forth. All that's left...
- 01:53 PM Bug #4684: Release tracking bug
- Closing this bug because the current 2.0 targeted bugs are the release bugs.
- 01:51 PM Bug #4070: Rework Section 1 and the GSG
- Chapter 1 and the GSG are now updated.
- 01:04 PM Bug #4868: Update R paths in documentation and demos
- Just noticed that the GSG also uses workflows with RExpression actors (00-StatisticalSummary and 05-LinearRegression)...
- 11:19 AM Bug #4872: listen to director throws error
- This also happens when you use these context menus:
Open Actor
Documentation => Display
Listen to Actor
I'm also n... - 04:17 AM Bug #4858: Open Actor on non-composite actors no longer works
- Fixed. The problem was actually occurring at both the trunk and the 2.0 branch on a fresh checkout. Which makes sense.
03/09/2010
- 07:59 PM Bug #4858: Open Actor on non-composite actors no longer works
- Christopher's comment#9 works for me (beneath, and adjusting for, the trunk with the wrp suite, at least). However if...
- 05:47 PM Bug #4070: Rework Section 1 and the GSG
- I updated the future goals section, corrected the contributors list, and made additional edits throughout. Chad -- I...
- 04:26 PM Bug #4681: Check all file properties before release
- Yep, svn:keywords and svn:style for all files:
bash-3.2$ svn proplist README.txt
Properties on 'README.txt':
svn:ke... - 04:13 PM Bug #4681: Check all file properties before release
- Which properties should we set? I propose keywords and eol-style as Derik said. Are there any others? I can write ...
- 04:10 PM Bug #4803: Review the README file
- Contributor list has been updated. All info in the README is now up to date. Version numbers need to be updated on ...
- 04:08 PM Bug #4685: Create installers
- Win/OSX/Lin Installers are now working and revised for the 2.0 release. Just version numbers (beta/rc/etc) need to b...
- 04:05 PM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- Pushing this to post 2.0 since I think it affects a small number of users. I don't think this should hold up the 2.0...
- 03:53 PM Bug #4873 (Resolved): Actors in repository library subtree are crammed together
- On Windows XP (maybe on other versions of windows) the actor icons are crammed tightly together when you open up Acto...
03/08/2010
- 03:19 PM Bug #4864: Update paths in demo workflows
- I updated $Kepler\outreach-2.0\resources\demos\getting-started\03-ImageDisplay.xml to fit the new directory name for ...
- 01:10 PM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- Yes. But for the moment it has to take second place to meeting our own rather extreme schedule commitments. I think...
- 12:42 PM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- Sounds good. Thanks, Tom. Would you consider creating a new GDAL module for kepler? If so, we would be willing to ...
- 11:36 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- OK. We're in the process of building the new suite of java language bindings now. We've gotten them to compile on a...
- 11:20 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- Hi Tom, The instructions for building gdal in windows are here:
http://trac.osgeo.org/gdal/wiki/GdalOgrInJavaBuildIns... - 05:45 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- Apologies for the delay. I've been travelling.
We obviously have the requisite hardware and can compile the GDAL C ... - 11:22 AM Bug #4070: Rework Section 1 and the GSG
- This bug can be closed once Matt has edited the future goals section of chapter 1.
03/05/2010
- 02:19 PM Bug #4872: listen to director throws error
- I believe this is more general; I've seen this error periodically lately when using other context menus.
- 02:14 PM Bug #4872 (Resolved): listen to director throws error
- Add an SDF Director and the Tools->Listen to Director. An error pops up on the console:
Error creating action fo... - 12:29 PM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- GDAL requires Microsoft Visual C++ to compile:
http://trac.osgeo.org/gdal/wiki/GdalOgrInJavaBuildInstructions
I don... - 11:25 AM Bug #4070: Rework Section 1 and the GSG
- Getting Started Guide is complete.
- 11:13 AM Bug #4070: Rework Section 1 and the GSG
- I checked out chapter 1. We need to update section 1.4 with new future goals of kepler. I've asked Matt if he might...
- 08:00 AM Bug #4070: Rework Section 1 and the GSG
- I think we can close this bug, but Chad can you look it over before I do ?
Thanks.
03/04/2010
- 09:37 PM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- I created a universal binary that supports 32 and 64 bit JVMs under MacOSX.
The library may be found in ptII/lib/matl... - 11:59 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- The Ptolemy Matlab interface has similar problems, I'm looking at building 64bit
libraries for the Mac. On the Mac,... - 09:34 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- >1) Check all native library actors and recompile as needed for the following
>platforms, and recompile/install as ne... - 04:44 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- commented out that bit of code - i believe it is redundant since it is also called in the open() method.
we should ke... - 02:23 PM Bug #4870 (New): searching for packages with the same name from multiple sources sometimes loses results
- I have packages soong.4.14 and soong.28.5 on DEV and soong.4.15 and soong.28.9 on KNB. They all have the same title....
- 11:27 AM Bug #4858: Open Actor on non-composite actors no longer works
- Sorry to be a Reopener, but this is still happening for me. I had Ben try it out, and it happens to him too. From Chr...
- 11:04 AM Bug #4869 (In Progress): changes made to workflows during dialogs before committing (Edit Parameters/Cancel)
- When I make changes to an actor through the dialog, it seems like the changes are made to the workflow immediately, b...
- 09:51 AM Bug #4078: Rework Section 9
- Updated by madhu.
- 09:21 AM Bug #4852: Documentation => Remove Customization doesn't work
- It did work at one point. It just removed the kepler documentation and let it default to the ptolemy docs. If there...
- 09:19 AM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- The action handler that supports figuring out which object has been clicked on seems to have been broken so in the in...
- 09:13 AM Bug #4077: Rework Section 8
- Added a new bug for updating the paths in the demos and docs. Closing this one.
- 09:11 AM Bug #4868 (Resolved): Update R paths in documentation and demos
- The demos path to the R demos should point to the R demos directory, not the outreach demos directory. Make sure thi...
- 09:09 AM Bug #4081: Rework Appendix B
- Ok, thanks, Debi. The only thing left to do on this is update screenshots then. I've made a separate bug (bug 4867)...
- 09:07 AM Bug #4867 (Resolved): Update screenshots for the documentation
- Any screen shots that are out of date should be retaken and updated in the documentation.
03/03/2010
- 11:54 PM Bug #4082: New user guide section on modules/module manager
- Made a new chapter (12) in the User Manual for modules. It is short and oriented towards users rather than developers...
- 11:47 PM Bug #4071: Rework Section 2
- Will do this documentation update when we get installers created.
- 06:03 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Hey Chad, is the Get Metadata context menu item supposed to be available for all actors? It looks like in 1.0 it was ...
- 05:52 PM Bug #4852: Documentation => Remove Customization doesn't work
- I wonder if this ever worked in Kepler? It doesn't in 1.0. I'm having trouble finding where/how the documentation may...
- 01:24 PM Bug #4852: Documentation => Remove Customization doesn't work
- This is kepler-specific, it works in vergil.
- 05:40 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- fixed also for Directors in r23268 (trunk) and r23269 (2.0)
- 04:29 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- is that a "yes"?
- 04:21 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- actor and director kars have been combined in head, closing this bug.
- 04:14 PM Bug #4858: Open Actor on non-composite actors no longer works
- (In reply to comment #13)
> This happened for me today too, as I was going through testing the examples in
> the Docu... - 03:45 PM Bug #4858: Open Actor on non-composite actors no longer works
- This happened for me today too, as I was going through testing the examples in the Documentation.
- 04:12 PM Bug #4081: Rework Appendix B
- (In reply to comment #5)
> (In reply to comment #4)
> > Originally, I had wanted to keep all of the screen shots cons... - 04:09 PM Bug #4081: Rework Appendix B
- (In reply to comment #4)
> Originally, I had wanted to keep all of the screen shots consistent, however,
> it's going... - 03:42 PM Bug #4081: Rework Appendix B
- Originally, I had wanted to keep all of the screen shots consistent, however, it's going to take a lot of work to do ...
- 03:16 PM Bug #4081: Rework Appendix B
- Reviewed the R appendix - some minor typos corrected, but no glaring omissions re: functionality. I was concerned abo...
- 11:37 AM Bug #4081: Rework Appendix B
- updated links to NCEAS R reference material. Links are as follows (thanks, Rick).
http://www.nceas.ucsb.edu/scicom... - 10:50 AM Bug #4081: Rework Appendix B
- Updated links, proof-read. Need NCEAS links to work. Sent email to shaun and rick asking about missing pdfs.
http:... - 04:06 PM Bug #4077: Rework Section 8
- only a couple minor things.
we do need to be aware of the act that the R examples are located in a the r module, not ... - 11:06 AM Bug #4077: Rework Section 8
- updated all links. reviewed and revised content. asking ben to make sure we're not missing anything with the additi...
- 03:41 PM Bug #4074: Rework Section 5
- Done updating section 5.
- 01:13 PM Bug #4865: Second time running a workflow by command line faild
- Working now for Jing and I, closing.
- 01:08 PM Bug #4865: Second time running a workflow by command line faild
- This was the problem Ben fixed the other day, but began recurring again probably because of my changes in r23263, but...
- 12:28 PM Bug #4865: Second time running a workflow by command line faild
- I ran into this also. I think the LSID is getting put in the cache, then when you try to run the WF from the kar file...
- 12:24 PM Bug #4865 (Resolved): Second time running a workflow by command line faild
- I use the following command to run a workflow:
java -classpath build-area/lib/ant.jar:kepler.jar org.kepler.build.ru... - 01:12 PM Bug #4860: GUI-free class for Workflow Run Export
- Works now for Jing and I at r23265, closing.
- 12:49 PM Bug #3976: Update Documentation for 2.0 release
- Chapter One of the user's guide links and screen shots have been updated. Asking Chad to review section 1.4 Future G...
- 12:22 PM Bug #4864 (Resolved): Update paths in demo workflows
- After RC1 is cut, update all file paths in the demo workflows to use the module-X.0 format.
- 11:16 AM Bug #4076: Rework Section 7
- The documentation is almost done. Several small issued to be discussed with Ilkay.
- 10:36 AM Bug #4078: Rework Section 9
- Updated all links and proof-read. Sent an email to Ilkay asking her to review the content as I don't know enough abo...
- 10:22 AM Bug #4078: Rework Section 9
- I'll take this one.
- 10:21 AM Bug #4079: Rework Section 10
- done.
03/02/2010
- 02:32 PM Bug #4858: Open Actor on non-composite actors no longer works
- I did:
mkdir kepler-2.0
cd kepler-2.0
svn co https://code.kepler-project.org/code/kepler/branches/releases/release-... - 11:22 AM Bug #4858: Open Actor on non-composite actors no longer works
- Christopher,
your fix does not work for me. Is there something else you did? The ptolemy-8.0/src directory is alr... - 10:51 AM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, the .classpath file does include the ptolemy src directory in the classpath. I'm currently looking into why thi...
- 02:30 PM Bug #4851: KarEntryAttributes not saved in MANIFEST.MF/KarXML
- fixed
- 01:31 PM Bug #4845: KAR dependencies not properly supporting module versions
- Seems to be OK now.
- 09:54 AM Bug #4860 (Resolved): GUI-free class for Workflow Run Export
- I'm trying to get the command-line execution working where I run a KAR and it produces a run KAR with the workflow/la...
- 08:26 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- GDAL probably just needs to be recompiled for this architecture, and the installer adapted to detect which architectu...
- 07:41 AM Bug #4859 (In Progress): GDALTranslate does not work on Windows 7 (64bit)
- GDALJniGlue fails to intialize on Windows 64bit operating systems.
ptolemy.kernel.util.IllegalActionException: i... - 07:31 AM Bug #3205: gdalTranslate actor crashes on bad format and won't work with all gdal formats
- We're having a similar problem on the 2.0.0 trunk. This is a trivial workflow that attempts to convert an ERDAS IMG ...
03/01/2010
- 09:59 PM Bug #4826: intermittent exceptions displaying matrix tokens
- Fixed.
The problem was that actor.gui.MatrixPane has a public variable JTable table.
This variable should only be use... - 02:01 PM Bug #4826: intermittent exceptions displaying matrix tokens
- This bug does not seem to affect functionality, so I'm moving it to 2.x.y
- 06:09 PM Bug #4858: Open Actor on non-composite actors no longer works
- I can reproduce this under Kepler trunk with Eclipse.
The workaround is to add ptolemy/src to the classpath.
How I ... - 05:39 PM Bug #4858: Open Actor on non-composite actors no longer works
- Also happens to me from trunk from within eclipse. Maybe another eclipse user can see if it happens to them too...
- 05:06 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, reopening. So even with the ptolemy revision confusion aside, on a fresh checkout of the branch, this error does...
- 03:08 PM Bug #4858: Open Actor on non-composite actors no longer works
- Thanks guys. I wasn't seeing a bunch of ptolemy updates from within eclipse. I've updated with ant update, and it's w...
- 02:54 PM Bug #4858: Open Actor on non-composite actors no longer works
- Oh, I should also note that I updated the context menu configuration last week to match up with some new ptolemy menu...
- 02:50 PM Bug #4858: Open Actor on non-composite actors no longer works
- I just tried this with the 2.0 branch and it worked for me. Have you tried a fresh checkout, derik? Also, are you u...
- 02:36 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hey Christopher,
Thanks, it works for me on trunk too, I should've tried that and also specified: this is currently a... - 02:34 PM Bug #4858: Open Actor on non-composite actors no longer works
- [Sorry, committed before being done].
I can't reproduce this. I'm running the Kepler devel tree
from the ptII head.... - 02:22 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, this works for me in the Kepler devel tree and the Ptolemy tree.
I'm running from the - 01:44 PM Bug #4858 (Resolved): Open Actor on non-composite actors no longer works
- Drag a Display to canvas, right-click Open Actor and you'll get an Error popup:
Cannot find a tableau or the source ... - 11:57 AM Bug #4857: Search on ecogrid server does not return proper results
- Fixed in r23242. Changed the ecogrid XML query document in a similar way to the way Ben told me to modify the query f...
- 11:50 AM Bug #4857 (Resolved): Search on ecogrid server does not return proper results
- I uploaded a test workflow called count.kar (LSID = 8097.16.1) to the Kepler dev repository. I then searched on term ...
- 11:15 AM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- I've filed a bug and an ER against vergil re: an NPE on Get Documentation on actor ports, and Customize Documentation...
02/27/2010
- 04:28 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- ReportLayoutKAREntryHandler.cache
WorkflowManager.getWorkflows
WorkflowManager.initialize
ObjectManager.getObjectRevi...
02/26/2010
- 08:27 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- fixed for workflows and actors in r23238.
- 05:10 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- The problem is with calling Show Documentation (which calls GetDocumentationAction) twice.
On the first call to Get... - 07:09 PM Bug #4852 (Resolved): Documentation => Remove Customization doesn't work
- If you Customize Documentation on a workflow or an actor, Remove Customization doesn't remove it.
- 03:26 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- I can see the cache() method will eventually call the ObjectManager. is this the culprit that forces parsing of the m...
- 03:13 PM Bug #4851: KarEntryAttributes not saved in MANIFEST.MF/KarXML
- Yeah, looks like KARBuilder.prepareManifest() only adds certain attributes to the Manifest. Really it should enforce ...
- 03:09 PM Bug #4851 (Resolved): KarEntryAttributes not saved in MANIFEST.MF/KarXML
- I'm trying to add some key metadata entries to the KAREntries I provide in the ReportInstanceKAREntryHandler. I can s...
- 02:29 PM Bug #4828: Uploading a top-level workflow to the repository fails
- Now the DOCTYPE is screened out from fragments prior to constructing the larger KAR XML document.
- 01:31 PM Bug #4828: Uploading a top-level workflow to the repository fails
- targeting for 2.0
- 02:05 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- Also combined directors-2.0 kars into one kar. do a
"rm ~/KeplerData/modules/directors-2.0/kar/*.kar"
and also an ... - 01:46 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- I have combined all the actors in the actors-2.0 module into 1 kar. Recommended to "rm ~/KeplerData/modules/actors-2...
- 11:54 AM Bug #4799: "Login Anonymously" gave an error during the data search
- Refactored the anonymous login configuration to be at the Domain class rather than the Repository class.
-adds config... - 10:53 AM Bug #4799: "Login Anonymously" gave an error during the data search
- Ugh. We still have two different systems for managing our various "remote services":
-Repositories (components)
-Ecog... - 10:38 AM Bug #4799: "Login Anonymously" gave an error during the data search
- I figured it out!
when you try to use the "Login Anonymously" button, the authentication service will try to look of... - 09:16 AM Bug #4849: ant eclipse fails
- Fixed. Forgot to add some new files to the repository.
- 09:10 AM Bug #4849: ant eclipse fails
- I should mention this is on trunk
- 09:10 AM Bug #4849 (Resolved): ant eclipse fails
- [eclipse] java.io.FileNotFoundException: /Users/leinfelder/workspace_kepler/kepler/build-area/resources/eclipse/Ptole...
02/25/2010
- 05:55 PM Bug #4848 (Resolved): only first change to Customize Documentation shown in Documentation=>Display
- If I right-click Documentation=>Customize Documentation on an actor, I can change the documentation, and Documentatio...
- 05:28 PM Bug #4337: 1.0 -> 2.0 upgrade issues tracking bug
- All tasks are closed. Closing this tracking bug.
- 03:27 AM Bug #4337: 1.0 -> 2.0 upgrade issues tracking bug
- Are there any remaining tasks for this bug?
- 05:27 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Fixed in rev 23213.
- 05:10 PM Bug #4847 (Resolved): Instantiating new actor from library gives error after restart
- Steps:
- On 2.0 branch, drag out e.g. an ImageJ actor, and e.g. change its name and customize its documentation
- r... - 03:45 PM Bug #4846: error opening kar from local repository
- I also noticed that, after restarting Kepler, the KAR and local repository *are* listed in the components pane, but t...
- 03:38 PM Bug #4846: error opening kar from local repository
- I just noticed, but I'm getting 2 of these errors every time I save to the local repository:
ERROR (org.kepler.obje... - 02:50 PM Bug #4846 (Resolved): error opening kar from local repository
- This is with wrp at r23202. I deleted .kepler and KeplerData. I create a trivial workflow (default SDF and RExpress...
- 03:17 PM Bug #3976: Update Documentation for 2.0 release
- All of the screenshots and hyperlinks for the getting started guide have been updated.
- 02:37 PM Bug #4845 (Resolved): KAR dependencies not properly supporting module versions
- The KAR dependencies are not being properly matched to module names and versions.
- 01:28 PM Bug #4801: out of memory
- There's another way to trigger a memory leak. I'm not sure if these are 2 different leaks or 2 symptoms of the same ...
- 11:55 AM Bug #4727: Cannot compile Ptolemy from IntelliJ
- I have fixed this so that Intellij's class path is determined in a manner more similar to the build.
- 11:54 AM Bug #4709: error updating ptolemy/src
- I have fixed this so that if ptolemy/src is not present due to a problem with checkout, "ant update" will attempt to ...
- 11:37 AM Bug #4831: Kepler (trunk) couldn't save a workflow to a remote repository as kar file
- I just tried and it works.
- 08:44 AM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- Jing, my test on 2.0 branch works. Thanks.
- 03:11 AM Bug #3027: jar handling issues
- This older bug can be closed. Multiple versions of the same jar can now be handled through either overrides or a spec...
02/24/2010
- 05:54 PM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- This issue was caused on PutServiceClient.java. Aprivate method on this class called System.exit(1) when it caught an...
- 01:50 PM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- make it available at kepler-dev.
- 12:38 PM Bug #4830 (Resolved): Kepler exit when using echoGridWriter actor with the wrong xml path.
- The message for the execution of the attached workflow.
[run] EcogridUtils: The time to create instance is =... - 01:45 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Fixed the missing director rt. click menu items. this was due to a menu reorg on the ptII side. Still working on th...
- 11:11 AM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- On wrp suite (kepler trunk), I saw the "Get Metadata" menu item after right click an eml actor on an existed workflow...
- 10:26 AM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- The right click menu works if you rt click on the item in the library. I'll see if I can add this to the right click...
- 01:11 PM Bug #4832: python actor outputting to disconnected composite output throws error
- I take back the part about it affecting the 2.0 branch. I can't keep my windows straight. It is affecting wrp.
- 01:09 PM Bug #4832: python actor outputting to disconnected composite output throws error
- This seems to affect the 2.0 Kepler branch.
- 01:07 PM Bug #4832 (Resolved): python actor outputting to disconnected composite output throws error
- I have a composite actor with an output port. Inside, I have an Expression passing a token to the default python act...
- 12:41 PM Bug #4831 (Resolved): Kepler (trunk) couldn't save a workflow to a remote repository as kar file
- On Kepler(trunk):
1. Open the eml-simple-plot.moml file.
2. Select my host as a saving destination (click source bu... - 10:10 AM Bug #4517: Verify that the search capabilities work
- To close this bug, close bug 4462 and bug 4799
- 10:08 AM Bug #4517: Verify that the search capabilities work
- Except bug 4462 and 4799, the others function seems working
- 10:05 AM Bug #4799: "Login Anonymously" gave an error during the data search
- The error message has gone. However,the GUI showed three times when I kept clicking the "Login Anonymously" button. ...
02/23/2010
- 06:22 PM Bug #4829 (New): User log4j files
- We had a request that users' be able to maintain their own log4j files, e.g. in an environment where many users use t...
- 03:17 PM Bug #4828 (Resolved): Uploading a top-level workflow to the repository fails
- Uploading a top-level workflow attempts to put the whole workflow, complete with doctype tag, into the KAR XML it the...
- 12:58 PM Bug #4010: RExpression2 - tracking for backwards compatibility
- First ... apologies. I just submitted an RExpression bug that you've already fixed in Rexpression2 (column major matr...
- 12:38 PM Bug #4827 (New): RExpression does not handle matrix tokens correctly.
- I've attached a simple workflow that demonstrates a bug in the way the RExpression actor translates Kepler/Ptolemy ma...
- 10:41 AM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- I think this was a problem with left over data from the provenance suite. I cannot replicate this. Closing for now....
- 10:40 AM Bug #4801: out of memory
- I am not able to reproduce this in the kepler suite. I think this is a WRP/Provenance problem. I'm going to retarge...
- 10:36 AM Bug #4826: intermittent exceptions displaying matrix tokens
- I saw this in Ptolemy, so it is a Ptolemy bug, not a Kepler bug. I'll see if I can fix it before the final version of...
- 10:23 AM Bug #4826: intermittent exceptions displaying matrix tokens
- Forgot to specify platform.
- 10:22 AM Bug #4826 (Resolved): intermittent exceptions displaying matrix tokens
- I experience intermittent exceptions displaying matrix tokens in a simple workflow. The problems are more frequent w...
- 10:35 AM Bug #4516: Module Manager needs ability to install modules needed by KARs
- Since 4483 is pushed to 2.x, pushing this one as well. most of the functionality is there, we just need a bit more t...
- 10:34 AM Bug #4685: Create installers
- verify that R can not be installed without not installing the entire R module.
- 10:33 AM Bug #4803: Review the README file
- Need to get a new contributor list.
- 10:24 AM Bug #4799: "Login Anonymously" gave an error during the data search
- this is not fixed for me. After merging the changes from the trunk to the branch, I have to click the "login anonymo...
- 09:46 AM Bug #4578: tracking bug for changes to .kepler
- Since 4785 has been closed, I don't think we're going to make any more changes to .kepler, so I'm closing this tracki...
02/22/2010
- 04:11 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- O.K. neglected to mention that I had cleared the KeplerData > modules > provenance data. Maybe that could have someth...
- 04:05 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- In Kepler. But just downloaded the new build for 2.0 branch, and now cannot replicate it. Will try a few more times...
- 03:59 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- What suite is this happening in? Kepler or WRP or other?
- 03:06 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- How big is the KeplerData folder (specifically, KeplerData/modules/provenance), and if you try this again, do you get...
- 02:45 PM Bug #4820 (Resolved): Out of memory Error: Error creating alternateGetMoml!
- While stepping through the examples in the documentation, I did the following:
1. Clicked on the Data tab and did ... - 03:57 PM Bug #4483: Module dependencies in MoML files
- pushing to post 2.0 release.
- 02:34 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- This only seems to be a problem with KARS that use the ReportLayoutKAREntryHandler.
- 01:54 PM Bug #4261: Long file name on windows
- Just an update on the long-line length problem.
The issue is that certain file systems have limits
and svn makes the ... - 01:44 PM Bug #4799: "Login Anonymously" gave an error during the data search
- This has now been fixed.
02/19/2010
- 05:01 PM Bug #4727: Cannot compile Ptolemy from IntelliJ
- Yeah, I will be working on this. In the meantime, we can just patch the individual IDEs so that they work for everyone.
- 04:59 PM Bug #4727: Cannot compile Ptolemy from IntelliJ
- This bug has cropped up again, this time also affecting Eclipse (and presumably NetBeans as well). The solution, acco...
- 01:08 PM Bug #4815 (New): Need a target to build kepler-styles.jar
- On kepler 1.0.0, there was a target to build kpelr-styles.jar from eml repository. However, it was removed from keple...
- 01:06 PM Bug #4807: GetMetadata does nothing
- In eml module, duplicated parameters were removed on eml-settings.xsl and eml-identifiers.xsl. Use a new target in em...
02/18/2010
- 05:18 PM Bug #4812 (New): local repository KAR [right click]->Delete fails when file does not exist
- Save a KAR to a local repository, then delete the file outside Kepler, then from the components tree right click the ...
- 03:48 PM Bug #4804: copy/paste relation changes width from Auto to 1
- I'm not 100% sure this is the same bug, but if I delete the actors and relation, then undo the change, the relation w...
- 03:48 PM Bug #4798: Create parser for KAR XML specification
- this is a 2.0 bug in that it is blocking the component search bug
- 03:46 PM Bug #4798: Create parser for KAR XML specification
- https://code.kepler-project.org/code/kepler/trunk/modules/core/src/org/kepler/kar/karxml/KARFile.xsd
is what exists ... - 12:51 PM Bug #4798: Create parser for KAR XML specification
- As far as I know, no. That's a good point. I'll leave this open until there's some soft of official schema to check a...
- 12:47 PM Bug #4798: Create parser for KAR XML specification
- is there a complete XSD now?
- 11:04 AM Bug #4798: Create parser for KAR XML specification
- Wrote initial implementation. I'll leave this bug open for a day or two for interested parties (especially those invo...
- 01:42 PM Bug #4811 (In Progress): No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- After dragging an EML actor from search result panel to canvas, there was a right-click menu item named "Get Metadata...
- 01:40 PM Bug #4810 (New): [right click]->Save Archive (KAR) on composite actor borks port attributes
- Open the example MOML and save the composite actor as a KAR file. If you extract the MOML from the KAR, you'll see e...
- 01:14 PM Bug #4808: ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- This is fixed. Logging and third-party libraries should generally be kept out of the build. If you need a third-party...
- 12:51 PM Bug #4808: ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- I am working on this bug now. It will be fixed shortly.
- 12:02 PM Bug #4808 (Resolved): ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- Chris first reported this by e-mail, but I'm still seeing it. Aaron, svn says you put these lines in.
java.lang.N... - 12:51 PM Bug #4809: Kepler storing authenticated search results
- I'm not sure the search is being performed on the server. All I know is I'm not being asked to authenticate again.
- 12:45 PM Bug #4809: Kepler storing authenticated search results
- this has long been the case for datasets that have already been downloaded/cached - if you restart Kepler you don't n...
- 12:18 PM Bug #4809 (New): Kepler storing authenticated search results
- From a clean cache, start Kepler and search using authenticated sources. Authenticate and Kepler will return search ...
- 12:02 PM Bug #4807: GetMetadata does nothing
- I can see a error on console:
[run] ERROR: 'jar:file:/home/tao/project/kepler/core/lib/jar/kepler-styles.jar!/style/... - 11:49 AM Bug #4807 (Resolved): GetMetadata does nothing
- Search for any data, right click on a search result, and select the only option, "GetMetadata". This does not seem t...
- 11:44 AM Bug #4805: searching for data gives an NPE
- It turned out that the NPE exception didn't affect the search result. But it still was annoying. We added a checking ...
02/17/2010
- 06:50 PM Bug #4793: Workflow Run Manager - clicking on row when provenance is off gives error
- You also can't delete rows when provenance is off, because getDefaultProvenanceRecorder will return a Recording in th...
- 05:48 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- I have created a KAR file that contains all the actors in the actors module. I called it CoreActors.kar and attached...
- 04:11 PM Bug #4806 (New): add output port to Throw Exception
- In some of my workflows, I have an actor that checks that certain components are installed and working before trying ...
- 03:52 PM Bug #4805 (Resolved): searching for data gives an NPE
- I searched for Kruger on both KNB and DEV using both authenticated and unauthenticated searches. I authenticated as ...
- 03:34 PM Bug #4804: copy/paste relation changes width from Auto to 1
- I can replicate this in Ptolemy
1. Right click on the relation and select "Configure". Note that the width is
set ... - 03:26 PM Bug #4804 (Resolved): copy/paste relation changes width from Auto to 1
- Drag 2 actors to the canvas and join them with a relation. Copy the actors and relation and immediately paste it. T...
- 03:19 PM Bug #4801: out of memory
- I suggest using JProfiler to track this down. They have a trial offer. Edward and I have licenses. I don't have th...
- 02:57 PM Bug #4801: out of memory
- After getting the out of memory error, I generated a heap histogram, restarted Kepler, and generated another heap his...
- 02:13 PM Bug #4801 (In Progress): out of memory
- ERROR: RecordingException: Unable to query data table: out of memory
I opened tpc01, ran it, closed it, opened tpc... - 02:50 PM Bug #4803 (Resolved): Review the README file
- Need to review the readme for factual accuracy and new content additions.
- 02:44 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- Ben can you email me the workflow that you're having problems with?
- 02:13 PM Bug #4802 (Resolved): KARs in KeplerData/workflows are being parsed on startup
- When I launch Kepler with a clean cache but with a workflow sitting in my local workflow directory that uses protecte...
- 02:43 PM Bug #4578: tracking bug for changes to .kepler
- I would argue against having a task to clean the persistent directory. It's supposed to be persistent and not have t...
- 02:35 PM Bug #4578: tracking bug for changes to .kepler
- The kar directories that used to be in the cache are now in the KeplerData directory, so they are not deleted/rebuilt...
- 02:27 PM Bug #4578: tracking bug for changes to .kepler
- ant clean-cache deletes .kepler/cache-2.0.0 in r23085
- 02:12 PM Bug #4578: tracking bug for changes to .kepler
- (In reply to comment #11)
> 'ant clean-cache' seems to not be deleting anything at the moment. shouldn't
> it?
Whoop... - 02:06 PM Bug #4578: tracking bug for changes to .kepler
- 'ant clean-cache' seems to not be deleting anything at the moment. shouldn't it?
- 01:55 PM Bug #4792: NPE from Eml200DataSource
- Now giving an actual message for the NPE and throwing it up the chain.
- 01:41 PM Bug #4792: NPE from Eml200DataSource
- i'll take this.
- 12:41 PM Bug #4800 (Resolved): CacheManager can not insert WorkflowRun into cache
- When you export a run, CacheManager's insertObject cannot insert WorkflowRun entries into cache. This is because the ...
- 12:26 PM Bug #4789: multiport input to composite actor seems to only pass first token
- Inside the composite, the relation between the multiport and the RExpression has width 1. I'm not sure how or why it...
- 11:26 AM Bug #4789: multiport input to composite actor seems to only pass first token
- If I listen to the multiport input on the RExpression inside the composite, I see one token on a single channel. If ...
- 10:03 AM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- I finally remembered that I can look directly at the provenance db while Kepler's running. I just deleted all the ru...
02/16/2010
- 04:38 PM Bug #4799 (Resolved): "Login Anonymously" gave an error during the data search
- After running Kepler, I typed the word "Datos" on the Search Data field and clicked search button. An Authentication ...
- 04:32 PM Bug #4798 (Resolved): Create parser for KAR XML specification
- Create a parser for the new KAR XML format, for use especially when it is returned from a metacat query.
- 03:51 PM Bug #4797 (Resolved): Verify that multiple workflow/actor KARs work as expected
- The KAR system was written to allow for storing multiple actors/workflows inside the KAR. This has not been well tes...
- 02:20 PM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- Running kars is not supported except in a server configuration. The reason for this is that the kar is first sent to...
- 02:18 PM Bug #4786: workflow file saved in KAR does not open when extracted
- KeplerMetadataExtractor was using Document.getFirstChild() to get the rootNode when it should have been using Documen...
Also available in: Atom