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From 10/19/2009 to 11/17/2009

11/17/2009

02:44 PM Bug #4336: Merge the old configuration systems
Have now removed the configXML system from kepler and replaced it with the new ConfigurationManager. ConfigurationMa... Chad Berkley
02:03 PM Bug #4410: Cannot open KARs from arbitrary location on disk
I tried this (after the fix) but I'm not able to use the command line to open/run the KAR that is not in the local re... ben leinfelder
12:28 PM Bug #4520: Login Anonymously Fails
Working for me - in all sorts of permutations. Derik is reporting some error messages when the results are parsed, bu... ben leinfelder
11:34 AM Bug #4520: Login Anonymously Fails
I've tried this for both DEV and KNB datasources and both worked fine.
Also tried for the SEEK domain (Tools->Ecogrid...
ben leinfelder
05:12 PM Bug #4555 (Resolved): error exporting etc >1 run with same name but different wf
If you export or open more than one run where the workflow names are the same but the workflows are different, you ge... Derik Barseghian

11/16/2009

03:13 PM Bug #4552: Workflow Run Manager Export Archive no longer adding to Library
fixed in r21544 -- just returning false when trying to add a object to cache that has no CacheObjectInterface. reenab... Derik Barseghian
03:02 PM Bug #4554 (Resolved): Make layout panel scroll to where the user dropped the last report item.
Right now the layout panel scrolls to the top of the report items after each item is dropped. It would be better if ... debi staggs
02:58 PM Bug #4507: report designer losing content when there are too many items
Just needed to dynamically re-size the scrolling pane in the layout panel, and it fixed the problem. debi staggs

11/14/2009

07:37 PM Bug #4552 (Resolved): Workflow Run Manager Export Archive no longer adding to Library
r21538, now setting KARFile members _lsidNames and _lsidTypes, introduced a bug: Export Run from WRM gives an error f... Derik Barseghian
07:27 PM Bug #4541: problem exporting run
Fixed, I believe in r21514. Derik Barseghian
07:23 PM Bug #4410: Cannot open KARs from arbitrary location on disk
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
07:23 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
07:23 PM Bug #4457: Workflow Run Manager - past Report Layouts don't open
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
04:56 PM Bug #4549 (In Progress): String Replace actor "remembers" previous execution values
1. Build a workflow with an SDF director (set iterations to 1), an RExpression (turn off graphics output), and a Disp... Oliver Soong

11/13/2009

03:11 PM Bug #4548 (Resolved): string tokens with newlines print the escape sequences
This was first noticed when viewing an RExpression's "output" port. The output port emits a string token containing ... Oliver Soong
03:06 PM Bug #4547 (Resolved): documentation for file parameter includes an error
The documentation for the file parameter includes at the top:
Error evaluating DocAttribute parameter: ptolemy.ke...
Oliver Soong
03:04 PM Bug #4545: String To Image Converter seems broken
I misread the documentation. Oliver Soong
02:44 PM Bug #4545 (Resolved): String To Image Converter seems broken
If I pass the an image file as a string ("C:/tmp/image.png") to the String To Image Converter actor, it seems not to ... Oliver Soong
02:46 PM Bug #4546 (Resolved): Save Archive on an actor quits Kepler
If you right click on an actor and select Save Archive, Kepler shows some error dialogs. Once you click through these... Derik Barseghian
02:18 PM Bug #4544 (Resolved): Enter key in Report Designer title invokes a search
I notice if I enter a title in the Report Designer and then hit Enter, I get debug messages on the console from Compo... Derik Barseghian
07:47 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
Unless I missed something, this turned out to not be so bad, and I've got it working locally. I'll check in after mor... Derik Barseghian
05:42 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
I've gotten option 1 to work locally: when opening (a) run(s) from WRM, just build a temp kar and then open it. This ... Derik Barseghian

11/10/2009

03:37 PM Bug #4467: WRP - restarting/reopening Kepler throws error
I also can get this reliably. Sean Riddle
03:36 PM Bug #4467: WRP - restarting/reopening Kepler throws error
I'm seeing this. The console indicates:
ERROR (org.kepler.reporting.rio.fop.ReportParser:parse:97) could not find ...
Oliver Soong
03:06 PM Bug #4540: authentication problems with dev.nceas.ucsb.edu
it was removed with the configuration system changes. i've now added it in the WRP module using a configuration override ben leinfelder
10:42 AM Bug #4540 (Resolved): authentication problems with dev.nceas.ucsb.edu
If I start Kepler and open a workflow that accesses the dev metacat, I get some error messages and this on the consol... Oliver Soong
02:39 PM Bug #4539: Applying a tag can be slow
Fixed in r21473. Problem was repeated calls to Vector contains() in NamedOntModel.getNamedClasses() which is expensiv... Derik Barseghian
06:48 PM Bug #4539: Applying a tag can be slow
See comment in r21462. Derik Barseghian
06:45 PM Bug #4539 (Resolved): Applying a tag can be slow
I've tracked down (one of?) the reason(s) for applying a tag being slow -- starting at the Workflow Run Manager a cal... Derik Barseghian
12:25 PM Bug #4541 (Resolved): problem exporting run
If in WRP I open and run a workflow, quit and restart Kepler, and then right click on the run and select Export Archi... Derik Barseghian
09:47 AM Bug #4410: Cannot open KARs from arbitrary location on disk
this can also be problematic when we use the "remote execution" version of Kepler because it forces us to either conf... ben leinfelder

11/09/2009

11:52 AM Bug #4538 (Resolved): problems with KARs that contain tags from default ontologies
If you Save KAR a workflow that you've tagged with a tag that comes from an existing ontology (e.g. one of the defaul... Derik Barseghian

11/06/2009

01:33 PM Bug #4518: Workflow Run Manager - no imported run tags
Tags are now serialized into WorkflowRun moml. Run tags are at the top level, workfow tags are in a workflowTags sect... Derik Barseghian
11:44 AM Bug #4512: missing entries with multiple copies of the same KAR file in a single repository
now that i've seen this...it's very confusing indeed!
I think it's absolutely fine to have the "same" (LSID matches) ...
ben leinfelder
09:05 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
this should work now that the LSID is not being changed when the workflow opens in a new namespace (kepler) instance ben leinfelder
08:30 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
also: just opening a plain old XML workflow file from a different InstanceAuthNamespace results in a new LSDI being a... ben leinfelder
08:24 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
The workflow in question has an LSID of:
urn:lsid:gamma.msi.ucsb.edu/OpenAuth/:964:30:97
when I step through opening ...
ben leinfelder
09:05 AM Bug #4224: New LSID generated when opened from KAR
i commented out the new LSID line - hopefully this does not have negative consequences for other parts of the system. ben leinfelder
08:39 AM Bug #4224: New LSID generated when opened from KAR
The LSID is still being changed when we have a new InstanceAuthNamespace. This is causing some problems with reports ... ben leinfelder
04:42 PM Bug #4533: printing from the report viewer prints the workflow editor content
Do we have a solution (even an idea) about how to change the Menu bar based on the current view? I'm thinking that we... ben leinfelder
04:42 PM Bug #4535 (Resolved): exception when initiating the kars of a module whose name include a period.
It can be reproduced by adding a 'globus3.0' in modules.txt. The exception happened when the kepler tries to initiate... jianwu jianwu

11/05/2009

11:21 AM Bug #4534 (Resolved): add extra space before section headers when BREAK_BEFORE is false
This is so incredibly trivial, but I can't lower the priority on this any more than it already is.
Section breaks,...
Oliver Soong
10:59 AM Bug #4532: have to manually click Build to rename repositories
So this only happens if the cell is still in editing mode when you press the OK button. If you hit return or click s... Aaron Aaron
10:34 AM Bug #4532: have to manually click Build to rename repositories
Oh, since I saw the Refresh item in the right-click menu on the components tree, I assumed that would be how to updat... Oliver Soong
10:22 AM Bug #4532: have to manually click Build to rename repositories
Thanks Oliver, I'll get the name changing fixed asap.
The build button was named because it will rebuild the whole l...
Aaron Aaron
09:56 AM Bug #4532 (New): have to manually click Build to rename repositories
If I open the Components Sources dialog and change the name of one of the sources, then click Ok, the changes are not... Oliver Soong
10:51 AM Bug #4409: View Documentation for an actor works once
I should clarify and add a workaround. This seems to occur only when right-clicking in the components tree and viewi... Oliver Soong
10:28 AM Bug #4409: View Documentation for an actor works once
When trying to view documentation the second time, there is some error information on the console:
Error in getting...
Oliver Soong
10:40 AM Bug #4507: report designer losing content when there are too many items
A test case is pretty simple. Put an RExpression on the canvas, then keep dragging the port into the report designer... Oliver Soong
10:16 AM Bug #4533 (In Progress): printing from the report viewer prints the workflow editor content
I didn't entirely expect this to work, but File->Print from the report viewer prints the workflow content, not the re... Oliver Soong
09:14 AM Bug #4359: Model Reference causes String index out of range error in variable setter
I think this actually got fixed sometime back around r21137. Oliver Soong

11/04/2009

11:42 AM Bug #4525: saved KAR and memory report can be out of sync
Upon further investigation, it seems that the ReportLayout (object) is being modified as it resides in the cache. So ... ben leinfelder
09:08 AM Bug #4525: saved KAR and memory report can be out of sync
sounds like we need to "clear out the memory" when we close the window for this workflow/layout.
this should probably...
ben leinfelder
06:39 PM Bug #4525: saved KAR and memory report can be out of sync
And I'm not touching the Refresh (using current layout) button, so that should have nothing to do with it. Oliver Soong
06:38 PM Bug #4525 (Resolved): saved KAR and memory report can be out of sync
Create a simple report sand save it. Now change it, close the report and re-open the KAR (I've been right-clicking i... Oliver Soong
11:36 AM Bug #4510: can't add local repository if its name begins with the name of another local repository
should be ok now Aaron Aaron
09:16 AM Bug #4510: can't add local repository if its name begins with the name of another local repository
it would be good to get this squared away for the wrp "release" ben leinfelder
10:47 AM Bug #4528: BREAK_BEFORE property for report sections does not work
had slightly incorrect xpath in the XSL ben leinfelder
08:41 AM Bug #4528: BREAK_BEFORE property for report sections does not work
this was working at one point. ben leinfelder
10:14 PM Bug #4528 (Resolved): BREAK_BEFORE property for report sections does not work
I'm not sure if this is broken or just hasn't been implemented, but if I create a trivial workflow and create a trivi... Oliver Soong
09:55 AM Bug #4521: KNB data error checking is overly aggressive
Error in my configuration manager conversion code in DelimiterResolver. Fixed. Chad Berkley
05:34 PM Bug #4521: KNB data error checking is overly aggressive
This is a problem with some configuration values. I'll get this fixed tomorrow. Chad Berkley
05:22 PM Bug #4521: KNB data error checking is overly aggressive
I think this is my fault. I'm trying to track it down now. Chad Berkley
05:03 PM Bug #4521 (Resolved): KNB data error checking is overly aggressive
On r21314, I can no longer access the Kruger data. I believe this is due to some overly aggressive error checking on... Oliver Soong
09:19 AM Bug #4512: missing entries with multiple copies of the same KAR file in a single repository
If i'm imagining this correctly, it would be the same as having any other "components" show up multiple times in the ... ben leinfelder
08:59 AM Bug #4529: NPE while saving KAR crashes Kepler
aaron - can you take a look at this since the stack trace looks to be around ActorMetadataKAREntryHandler?
ben leinfelder
10:42 PM Bug #4529: NPE while saving KAR crashes Kepler
I can reproduce this on 21316. I'm not sure which of these steps is absolutely necessary, but this is what I do:
1...
Oliver Soong
10:30 PM Bug #4529: NPE while saving KAR crashes Kepler
Incidentally, I can restart Kepler and open the saved KAR. Oliver Soong
10:19 PM Bug #4529 (Resolved): NPE while saving KAR crashes Kepler
While exploring another bug, I encountered this NPE, and it entirely killed Kepler. This happened after saving a wor... Oliver Soong
08:57 AM Bug #4530: changing a KAR outside of a Kepler session fails without a clean-cache
Because objects are cached (report layouts, workflows, etc) I think it's reasonable to encounter the behavior you see... ben leinfelder
12:25 AM Bug #4530 (Resolved): changing a KAR outside of a Kepler session fails without a clean-cache
If I create a KAR, close Kepler, modify the ROML (unzip, text editor, re-zip), then replace the original KAR and star... Oliver Soong
08:52 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
svn co https://code.ecoinformatics.org/code/kruger/trunk/workflows/tpc01-buffalo-tb
There should be a KAR in there a...
Oliver Soong
08:49 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
Transporting the InstanceAuthNamespace is unacceptable.
One of the major reasons for having KARs is for sharing them ...
ben leinfelder
08:01 PM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
It looks like a workaround is to transfer the InstanceAuthNamespace file from one computer to the other. It requires... Oliver Soong
07:39 PM Bug #4527 (Resolved): reports cannot be loaded when InstanceAuthNamespace changes
Generate a report and save the KAR. Close Kepler, clean-all, delete the configuration folder, LastObjectID, and .pto... Oliver Soong
12:09 AM Bug #4522: Folder not found in library index
I should add that I've only been able to reliably observe this with a specific Kruger TPC workflow (I haven't really ... Oliver Soong
09:02 PM Bug #4522: Folder not found in library index
I've confirmed that this occurs when you try to save over the archive that is currently opened. Create a KAR archive... Oliver Soong
05:28 PM Bug #4522 (Resolved): Folder not found in library index
I wasn't able to get any assistance with this on IRC, and this has occurred multiple times. I haven't yet been able ... Oliver Soong
07:00 PM Bug #4523: apply button while editing ports acts like commit
Fixed in the Ptolemy head.
I'm not sure what's so difficult about this little bit of code that prevents me
from getti...
Christopher Brooks
06:29 PM Bug #4523: apply button while editing ports acts like commit
Also, for what it's worth, this problem occurs with r21314. However, with r21218, the commit button seems to behave ... Oliver Soong
06:27 PM Bug #4523 (Resolved): apply button while editing ports acts like commit
I think this was triggered by the fix for 4478. The apply button now acts like the commit button, as the ports windo... Oliver Soong
06:59 PM Bug #4526 (Resolved): multi-line entries can be put into text items in reports, but they are displayed on a single line
I'm not sure if this is a bug or an enhancement request. I guess it depends on what the intention was. Are text box... Oliver Soong
06:34 PM Bug #4524 (Resolved): no prompt to save a changed report
If I change the report, don't save, and close the window, I get no prompt to save it. Oliver Soong
04:17 PM Bug #4520: Login Anonymously Fails
Errors from the console:
[run] searching..
[run] ldap authenticating...
[run] creating gui
[run] d...
Chad Berkley
04:16 PM Bug #4520 (Resolved): Login Anonymously Fails
If you do a data search, you are prompted to login. If you click the "Login Anonymously" button, not only does it no... Chad Berkley

11/03/2009

03:46 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
This Ptolemy model has a top level with a const connected to one port of a two port composite. Inside the composite,... Christopher Brooks
03:13 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
I tried disconnected graphs, but it still throws the error.
I realize it's a slightly complicated case, as the sched...
Oliver Soong
03:09 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
Ah, nevermind, I see the test cases. Christopher Brooks
03:08 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
Need a test case here.
Also, try selecting "Allow disconnected graphs" in the SDF director.
Christopher Brooks
02:41 PM Bug #4519 (New): SDF Director cannot schedule when composite actor input port is disconnected
A workflow with an RExpression actor with unconnected input ports will work (see attached example 1). However, if I ... Oliver Soong
03:33 PM Bug #4507: report designer losing content when there are too many items
This is looking somewhat more serious. It seems like the report is actually losing content when it no longer fits in... Oliver Soong

11/02/2009

01:32 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Number 2 should also work now. Sean Riddle

10/30/2009

04:49 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Tagging all selected rows sounds more desirable to me. It would be common for someone to run a model a bunch of time... Matt Jones
04:17 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
An easy solution for now would be to disable tagging (probably changing the displayed tagging context to something li... Sean Riddle
04:14 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Looks like Sean has fixed #1.
I've fixed #3.
#2 still a problem.
Derik Barseghian
04:25 PM Bug #4518 (Resolved): Workflow Run Manager - no imported run tags
If you export a run that has tags into a kar, then delete that run from the WRM, then open that kar, the imported run... Derik Barseghian

10/29/2009

03:12 PM Bug #4506: Exception is thrown during workflow execution
If it comes to the use case - yes and no.
It fails during execution of the workflow that combines PN and DDF directo...
Michal Owsiak
01:39 PM Bug #4514: Files are being saved in the Kepler installation directory
There are two options here, keep the configuration directory in the installation directory and save the other files t... Aaron Aaron
12:05 PM Bug #4514 (Resolved): Files are being saved in the Kepler installation directory
There are still files and directories being saved, at runtime, to the Kepler installation directory. These files nee... Chad Berkley
01:33 PM Bug #4324: ptII/module-info/revision.txt not being updated
Working again. I'll monitor this to make sure it keeps working. Chad Berkley
12:46 PM Bug #4324: ptII/module-info/revision.txt not being updated
My cron job has, for some reason, decided not to find ant. I'm working with Nick on figuring this out. Chad Berkley
01:30 PM Bug #4273: Ctrl+E operates on mouse position, not selection
Very minor, moving to post 2.0. Chad Berkley
01:29 PM Bug #4202: typos in modules.txt are ignored
Not critical for users so moving to post 2.0. Chad Berkley
01:27 PM Bug #4430: hsql database name and port in Kepler should be configurable
Not critical for users so moving to post 2.0. Chad Berkley
01:25 PM Bug #4354: Enable the build system to work on multiple SCM systems.
Not critical for users so moving to post 2.0. Chad Berkley
01:25 PM Bug #4339: build system needs to provide more information on modules
Not critical to the user experience in kepler, so moving to post 2.0 Chad Berkley
01:24 PM Bug #4097: here are some new svg icons for actors
Punting on this until after 2.0 since it is not critical. Chad Berkley
01:18 PM Bug #4311: Build system appears to lock if there is a conflict upon update
pushing to post 2.0 since this does not affect the user experience. Chad Berkley
01:15 PM Bug #4153: report-overrides
since this does not affect the user experience, I'm pushing this to post 2.0 Chad Berkley
01:13 PM Bug #4246: Reorganize code in util, core and gui modules
Since this is mostly done and will not effect the user experience of kepler 2.0, i'm pushing this to a post-2.0 miles... Chad Berkley
01:12 PM Bug #3948: Create new configuration system supporting modules
The configuration system is now 99% done with only minor tweaks needed. I am still finding and adding utility method... Chad Berkley
12:18 PM Bug #4517 (Resolved): Verify that the search capabilities work
As per the roadmap, search capability requirements include:
* local search of direstories
* remote search of repo...
Chad Berkley
12:15 PM Bug #4516 (Resolved): Module Manager needs ability to install modules needed by KARs
The roadmap specifies that the module manager should be able to automatically install modules needed by a specific KA... Chad Berkley
12:12 PM Bug #4515 (Resolved): Finish and Document the Save/Open KAR file functionality
We need to finish the save/open functionality as listed in the kepler roadmap. This functionality should also be doc... Chad Berkley
10:43 AM Bug #4513 (Resolved): On the PC the paint transparency for buttons doesn't redraw correctly
Only on the PC, the buttons that have semi-transparent paint end up showing some of the text strings from tables in t... debi staggs

10/28/2009

03:43 PM Bug #4512 (Resolved): missing entries with multiple copies of the same KAR file in a single repository
Things don't seem to work right if I have multiple copies of the same KAR file in a single local repository. I think... Oliver Soong
03:30 PM Bug #4509: Report instance not being serialized with Save Archive
My mistake, the pdf shouldn't be saved with Save Archive since it's specific to an instance. Derik Barseghian
05:58 PM Bug #4509 (Resolved): Report instance not being serialized with Save Archive
In WRP it looks like the report instance (pdf) is no longer being serialized into the KAR when you File => Save Archive. Derik Barseghian
01:54 PM Bug #4511: There are 2 toolbars in the Kepler main window
That is correct. I think the tag entry bar on the main toolbar does not look particularly cluttered, but putting tags... Sean Riddle
01:50 PM Bug #4511: There are 2 toolbars in the Kepler main window
So there's a tags toolbar and the regular toolbar, and the tags menu is on the regular toolbar but the tags themselve... Oliver Soong
01:49 PM Bug #4511: There are 2 toolbars in the Kepler main window
That's where tags go. If you add a tag, the toolbar gets sized appropriately. Sean Riddle
01:46 PM Bug #4511 (Resolved): There are 2 toolbars in the Kepler main window
There are 2 toolbars in the Kepler main window, one of which is empty. I've seen this using wrp on Windows and linux... Oliver Soong
12:24 PM Bug #4510 (Resolved): can't add local repository if its name begins with the name of another local repository
If I've added C:\Documents and Settings\soong\Desktop\kruger as a local repository, I can't add C:\Documents and Sett... Oliver Soong
11:07 AM Bug #4504: Semantic Type Browser
This is no longer happening. Derik Barseghian
05:05 PM Bug #4508: report viewer should listen for executions to finish
added handling for the event being broadcast by reporting ben leinfelder

10/27/2009

04:27 PM Bug #4508 (Resolved): report viewer should listen for executions to finish
After running a workflow in the report viewer, the user must "change" to the report viewer before the report is updat... Oliver Soong
04:25 PM Bug #4507 (Resolved): report designer losing content when there are too many items
If I have a lot of items in the report designer, the scroll bar seems to be too short for the content. Eventually, t... Oliver Soong
02:20 PM Bug #4506: Exception is thrown during workflow execution
Is there a test case? Christopher Brooks
01:46 PM Bug #4506 (Resolved): Exception is thrown during workflow execution
Within PN like workflow it seems that one thread iterates through the hashmap while other one modifies the data of th... Michal Owsiak
01:14 PM Bug #4505 (Resolved): NPE from Semantic Search
On os X or linux w/ the kepler suite, I get an NPE when I try to run a search in the Semantic Search dialog:
...
Derik Barseghian
01:06 PM Bug #4504 (Resolved): Semantic Type Browser
On os X 10.5 w/ the wrp suite I get an error when I select an ontology in the Semantic Type Browser (right click on c... Derik Barseghian
12:33 PM Bug #4503 (Resolved): Suggest Similar Components gives an error
If I right click on an actor on canvas and select Suggest => Similar Components, I get an NPE. This happens in the ke... Derik Barseghian

10/22/2009

04:13 PM Bug #4483: Module dependencies in MoML files
I've implemented and checked in a prototype of solution 1. At the moment, it only solves the original bug if you cle... Aaron Aaron
03:27 PM Bug #4483: Module dependencies in MoML files
If you are going to implement a temporary solution, I think you should instead
just save the current active configura...
David Welker
02:47 PM Bug #4483: Module dependencies in MoML files
Yes, OSGi allows dependencies to span multiple versions. Definitely read the OSGi spec if you haven't already. Woul... Aaron Aaron
02:39 PM Bug #4483: Module dependencies in MoML files
Besides OSGi, another technology to consider for inspiration is Project Jigsaw. Check out this link here for more inf... David Welker
02:19 PM Bug #4483: Module dependencies in MoML files
Hi Aaron,
I think it is an interesting idea.
So, you are basically saying that when an actor is added to the workfl...
David Welker
01:00 PM Bug #4483: Module dependencies in MoML files
David, what do you think about putting the responsibility not on an automated class/module detection system or on the... Aaron Aaron
12:56 PM Bug #4483: Module dependencies in MoML files
Your point about overrides is not correct. If you are using a module that includes an override and your workflow uses... David Welker
12:33 PM Bug #4483: Module dependencies in MoML files
a class-based decision about which modules are required won't work in cases where we are using class overrides... ben leinfelder
12:30 PM Bug #4483: Module dependencies in MoML files
Good point. But this can be solved by simply making the current active configuration the default. If the workflow eng... David Welker
12:15 PM Bug #4483: Module dependencies in MoML files
Storing the active module configuration in the kar would certainly do the trick. I think it may be too restrictive t... Aaron Aaron
05:15 PM Bug #4483: Module dependencies in MoML files
This is the reason I believe we need to store the active module configuration inside the KAR is some manner. Then whe... David Welker
05:10 PM Bug #4483: Module dependencies in MoML files
Definitely inelegant. Down the road could it be a serious problem though? Should we disallow even the attempt to op... Aaron Aaron
02:48 PM Bug #4447: Change Icon for Dynamic Report Items
Changed this to use the actor icon for now, since that is visually associated with the workflow. debi staggs
02:47 PM Bug #4445: Fix white backgrounds for button images
This is now fixed, so that the backgrounds are transparent. debi staggs
11:46 AM Bug #4481: KNB authentication and pulling data
i've added the endpoint to the name of the EML datasource so that they both show in the result set if you have both s... ben leinfelder
09:23 AM Bug #4481: KNB authentication and pulling data
What do you think it _should_ look like when you end up searching what are essentially the same sources? Right now th... ben leinfelder
05:47 PM Bug #4481: KNB authentication and pulling data
(In reply to comment #5)
> That, uh, would be because you apparently aren't in the kruger-tpc group that
> has access...
Jim Regetz

10/21/2009

04:17 PM Bug #4483: Module dependencies in MoML files
You can still execute the workflow after skipping those class not found exceptions when you open the workflow - but i... ben leinfelder
04:15 PM Bug #4483 (Resolved): Module dependencies in MoML files
To reproduce:
Save a KAR from the WRP suite
change to the kepler suite
on startup you see the error:
Error enc...
Aaron Aaron
03:02 PM Bug #4482: JRE Exception Access Violations
The problem is likely specific to the machine, graphics card, OS and JVM.
Try upgrading the JRE that you are using.
...
Christopher Brooks
02:53 PM Bug #4482: JRE Exception Access Violations
Is there anything I can do to avoid this? I hate saving my work. Oliver Soong
02:43 PM Bug #4482: JRE Exception Access Violations
These are Java issues. Both stack traces show the problem being in the
AWT-EventQueue thread.
The one with a usefu...
Christopher Brooks
02:10 PM Bug #4482 (Resolved): JRE Exception Access Violations
I've gotten a couple of these. All of Kepler just goes without warning. I have 2 error logs, which I will attach. ... Oliver Soong
02:00 PM Bug #4478: Configuring ports
I modified PortConfigurerDialog._apply() so that if the change request fails,
then the port configurer dialog will cl...
Christopher Brooks
12:04 PM Bug #4478: Configuring ports
It's frustrating that we can all see the original bug, but can't reliably replicate it.
As for the port swapping thi...
Oliver Soong
11:54 AM Bug #4478: Configuring ports
I was able to reproduce this once, but now I can't.
The problem here is that swapping the name of two ports (or any ...
Christopher Brooks
10:27 AM Bug #4478: Configuring ports
I can't seem to go through the actions that replicate it but it happened again yesterday for me and I wasn't doing an... shirley shirley
09:41 AM Bug #4478: Configuring ports
I can't seem to figure out exactly what replicates it. The closest I can come is getting ports to swap relations.
I...
Oliver Soong
05:38 PM Bug #4478: Configuring ports
Yep, it looks like a bug. Let me know if you can replicate it. I just tried it in Ptolemy and could not get a stack... Christopher Brooks
11:48 AM Bug #4439: reporting displays output for a different actor
This is looking more and more like an intricacy of Provenance recording. My hunch is that when you first add the RExp... ben leinfelder
11:30 AM Bug #4359: Model Reference causes String index out of range error in variable setter
The exception is from the provenance recorder. Daniel Crawl
11:27 AM Bug #4481: KNB authentication and pulling data
That, uh, would be because you apparently aren't in the kruger-tpc group that has access... Regetz? Oliver Soong
11:19 AM Bug #4481: KNB authentication and pulling data
hmm I see. I was not capitalizing Kruger. I'm able to see results using only authenticated interface but now I'm gett... shirley shirley
11:10 AM Bug #4481: KNB authentication and pulling data
What are your search terms? There's a surprise about case. Searching for kruger and Kruger are the same for unauthe... Oliver Soong
11:02 AM Bug #4481: KNB authentication and pulling data
I've tried only searching through the authenticated interface sources, but when I do this, I don't receive any result... shirley shirley
11:22 AM Bug #4436: composite actor output ports cannot be added to reports
Did some more investigation:
-we can allow CompositeActor ports to be added to the report layout, but provenance isn'...
ben leinfelder
10:28 AM Bug #4441: reporting fails to output figure
I removed the ProvenanceRecorder and ReportingListener entries from the MOML of the bovine workflow. Then I opened th... ben leinfelder
09:31 AM Bug #4469: Report Viewer - labels take up too much space
increased the proportional width of the center (main content) column ben leinfelder
08:55 AM Bug #4276: RExpression temp files can collide
included in r21133 now ben leinfelder
08:53 AM Bug #4276: RExpression temp files can collide
i had to add an extra display actor so that type checking did not fail on the second run of the workflow, but that's ... ben leinfelder
08:52 AM Bug #4276: RExpression temp files can collide
about to submit the fix that oliver provided. ben leinfelder
05:25 PM Bug #4470: Report Viewer - labels should be vertically centered
used this FOP property in the table-cell: display-align="center" ben leinfelder
05:08 PM Bug #4468: Report Viewer - message to run workflow first
added MessageHandler.message() if no previous executions were found. i believe that's less intrusive than rearranging... ben leinfelder

10/20/2009

04:56 PM Bug #4474: Report viewer - enable scroll wheels
this is actually a FOP limitation...this is in the FOP source for PreviewPanel class that we use:
"// FIXME should ad...
ben leinfelder
03:59 PM Bug #4471: Report Viewer - remove TOC
removed from the configuration in WRP suite. ben leinfelder
03:58 PM Bug #4481: KNB authentication and pulling data
Shirley, just FYI, the authentication window only pops up when needed. That means the first time you do an authentic... Oliver Soong
03:09 PM Bug #4481 (Resolved): KNB authentication and pulling data
In order to sign into KNB with my username and password, I need to clean my cache (no way to manual force the authent... shirley shirley
03:58 PM Bug #4472: Report Viewer - use different ViewPane class
added SingleViewPane class and am now using it in the WRP suite for the Report Viewer view ben leinfelder
03:33 PM Bug #4466: Report Designer - report layout not shown when opening KARs
using the event-state module to broadcast to the report layout UI that the report layout model has changed and that i... ben leinfelder
10:32 AM Bug #4478: Configuring ports
I think I'm able to replicate this. FYI, I still have 12506K memory free. I'm not sure it's a memory issue, and I'm... Oliver Soong

10/19/2009

01:56 PM Bug #3948: Create new configuration system supporting modules
I've been working on prototyping and setting up unit tests for the configuration system. There are a few issues I've... Chad Berkley
01:15 PM Bug #4465: Report Designer - "drag to here" paper should disappear
'Drag to here' paper now disappears whenever you drag a report item panel into the report. It also re-appears if you... debi staggs
12:25 PM Bug #4362: component search performance
Subsequent searches increase library refresh times substantially for large result sets. This is probably due to obje... Aaron Aaron
12:07 PM Bug #4362: component search performance
After merging the tree the results of the timing analysis are below. The data set used was slightly different from b... Aaron Aaron
12:24 PM Bug #4397: Panel should get selected whenever it has the focus
Panel is now selected and highlighted whenever it gets the focus. debi staggs
12:24 PM Bug #4464: Report Designer - selection pointer behavior
- Crosshair point has been removed.
- Arrow turns to finger on hover, except for text areas.
- Clicking anywhere (or ...
debi staggs
12:21 PM Bug #4402: When a report item is deleted clear the properties window
What currently happens here, is that when a selected report item is deleted, then that panel disappears, and the sele... debi staggs
11:37 AM Bug #4449: exception when dragging workflow
I am unable to reproduce this. Can you give more detail on how to reproduce this? What actors you're using, what OS... Aaron Aaron
10:34 AM Bug #4401: Synchronize properties with selected report item
The properties panel now displays the properties for whichever report item panel is selected. debi staggs
 

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