Activity
From 04/25/2009 to 05/24/2009
05/22/2009
- 01:25 PM Bug #4104: Need resource manager to handle objects in the resources directories
- In general I think this is a good idea. But, I could also envision having a number of general search paths for resou...
- 12:20 PM Bug #4104 (New): Need resource manager to handle objects in the resources directories
- This class should have static methods for accessing items in the modules' resources directory. This would allow reso...
- 12:25 PM Bug #4105 (Resolved): Make build system automatically build OS dependent modules
- There should be a way to tell the build system to automatically build (or not build) modules that are OS dependent so...
- 10:24 AM Bug #3764: Kepler needs to support EML 2.1.0
- There's no way to add EML 2.1.0 support to Kepler 1.0.0.
We will have a "release" of some sort for the TPC training i...
05/21/2009
- 04:37 PM Bug #4103 (Resolved): Add the capability of creating SECTIONS in the report.
- Give the user the ability to group things together in sections in a report. A section should also provide an (option...
- 04:34 PM Bug #4102 (Resolved): Add the ability to insert a static image into the report.
- Add the ability to insert a static image into the report.
- 04:25 PM Bug #4101 (Resolved): Report Designer - Create a manager class for the Static Report Items
- Currently there is a small list of static report items that we are using in the reporting module, so these items are ...
- 01:20 PM Bug #4092: record all files referred to in array tokens
- fixed in r18455.
- 05:53 AM Bug #4097: here are some new svg icons for actors
- New icons: bar chart; scatter plot; pie chart; calculator; filter
- 05:48 AM Bug #4097 (New): here are some new svg icons for actors
- We had occasion to need better icons for some of the standard actors. You might want them as well. I will add them as...
05/20/2009
- 06:53 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- priorities:
- use and show kepler-lsid
- work with aaron, dan, et al to determine what goes in pub ready archive.
- a... - 04:35 PM Bug #4095 (New): Java Package Ontology (e.g. to facilitate Ptolemy component access)
- Ptolemy has a number of neat components that are currently very hard to get to.
For example, MonitorReceiverContent... - 04:30 PM Bug #4094 (Resolved): new Unnamed windows should have a suffix that increments
- This would help to differentiate windows. Right now each new window has the same name: Unnamed.
- 03:59 PM Bug #3958: REPORT DESIGNER - Delete report items from the report designer
- Report items can now be deleted from the report designer canvas, and, of course, the report. : )
- 03:39 PM Bug #4093 (Resolved): allow kepler to use OS specific UI elements
- I've implemented an extension point in kepler to allow us to build OS specific UI tweaks into kepler without breaking...
- 02:52 PM Bug #4092 (Resolved): record all files referred to in array tokens
- We currently only recording a file if it's in a string token. Ben requests: check all tokens in array tokens to see i...
- 02:44 PM Bug #4091 (Resolved): Make it so the build system can use a "blessed" version of Ptolemy.
- gatekeeping mechanism where by we use a "blessed" version of Ptolemy that is very close to the trunk, but not necessa...
- 02:40 PM Bug #4090 (Resolved): You should be able to specify a particular revision number or date with ant update.
- The ant update command should optionally allow you to specify a revision:
ant update -Drev=12345
All the module... - 02:34 PM Bug #4089 (Resolved): Ensure that module-manager, loader, and the build system all work with a new versioning system for modules.
- The new versioning system must be implemented and tested so that the module-manager, loader, and build system can wor...
- 02:32 PM Bug #4088 (Resolved): Create new configuration system
- Per our at the Kepler developer's meeting, we need to develop a unified configuration system starting with a prototype.
- 02:05 PM Bug #4049: Import actor that already exists appends strange numbering scheme
- Re: comment#4, for example, if an actor RExpressionRain2001 is created and saved in the library, when dragged to canv...
- 11:10 AM Bug #4049: Import actor that already exists appends strange numbering scheme
- Soong notes that when dragging an actor with name ending in a digit(s) to canvas, the digits are dropped.
- 11:28 AM Bug #4087: No reset/x button to clear component searches
- Making the Cancel button useful when a search is not in progress, to do a reset, seems like a good idea to me. If we ...
- 10:52 AM Bug #4087 (New): No reset/x button to clear component searches
- Under both linux and Windows, there is currently no way to clear the results of a search on the components tab. Ther...
- 11:08 AM Bug #3764: Kepler needs to support EML 2.1.0
- Kepler 1.0.0 doesn't support EML 2.1.0. I know we're moving towards a new release, but since the Kruger stuff is sti...
- 10:31 AM Bug #4086 (Resolved): Port-Parameters half-work with composite actors
- Under the SDF Director, I can create a Composite Actor containing a Port-Parameter and a Display actor. There are 4 ...
- 09:06 AM Bug #4062: Web Services and Data Transformation demo throws a StringOutOfBounds
- Fixed: looks like the actor relied on its parameters to be set in a specific order.
05/19/2009
- 11:22 PM Bug #1750: Allow KAR files to include jar/class files
- KAR files used to contain class files, and wer eboth a successful and necessary part of Kepler 1.0. I am reopening t...
- 08:52 PM Bug #1750: Allow KAR files to include jar/class files
- KAR files will not contain class files or JAR files. Classes and jars will be contained within Kepler modules. KAR ...
- 09:22 PM Bug #3939: Kepler Unique LSID Namespace generation
- Documentation for the KeplerLSID system will be maintained here:
https://kepler-project.org/developers/teams/framewo... - 05:57 PM Bug #3691: JButton labels truncated on macOSX
- Refresh button fixed. Closing. For some reason had to comment out setMaximumSize, even though SearchUIJPanel uses the...
- 05:01 PM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- Oh, well there's also a problem with the table Woody_Vca_Sites.txt. The preview window wasn't working right probably...
- 04:24 PM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- it's not necessarily the Preview function per se - more that I can see many many errors about numeric format exceptio...
- 12:18 PM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- Can you clarify the problems you're having with the Preview option? I know in some of the tables there are unusual c...
- 11:25 AM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- if you update from the development trunk, you should now have three different document types available for the KNB Au...
- 03:11 PM Bug #4067: Add "about" widget for kepler on the mac
- Thanks for the info, Matt. The icon is currently set in the plist file, and it shows up fine in the Finder, but not ...
- 10:59 AM Bug #4067: Add "about" widget for kepler on the mac
- Handling the About menu is possible and described in the Java Development Guide for Mac OS X:
http://developer.apple.... - 10:43 AM Bug #4067: Add "about" widget for kepler on the mac
- It would also be nice to figure out how to make the kepler icon show up in the apple-tab list instead of a generic "e...
- 10:40 AM Bug #4067: Add "about" widget for kepler on the mac
- Possibly need to change a key/value in the Info.plist file, but that won't work for ant runs, only when Kepler is exe...
- 10:38 AM Bug #4067: Add "about" widget for kepler on the mac
- Found this:
http://developer.apple.com/documentation/Java/Reference/Java_PropertiesRef/Articles/JavaSystemProperties.... - 02:24 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- 'Open Workflows in New Windows' context menu now works. I cobbled this together though, and need to clean it up and m...
- 11:23 AM Bug #3673: Create model for the Report Instance (RIO)
- The model for the Report Instance (RIO) has been created.
- 11:19 AM Bug #3636: Support multiple Report formats
- We support the report formats as follows: .pdf and .html
- 11:19 AM Bug #3764: Kepler needs to support EML 2.1.0
- let's reopen if there are other problems that crop up. I think the dataTable parsing is pretty much the same from eml...
- 10:41 AM Bug #3764: Kepler needs to support EML 2.1.0
- In the Kepler Registry: updated the Query Service and Authenticated Query Service entries to include EML 2.1 doctypes
- 10:23 AM Bug #3764: Kepler needs to support EML 2.1.0
- I've added a metadata specification class to the util module (like eml 2.0.0 and eml 2.0.1 have).
Also allowed both "... - 11:18 AM Bug #3608: Create initial class diagrams for the reporting feature.
- Class diagrams for reporting have been created.
- 11:17 AM Bug #3640: Identify items of interest in workflow.
- The user can flag items of interest by right clicking on a port in the workflow and using the context menu to add it ...
- 11:16 AM Bug #3667: Mock-up Report Designer UI
- The report designer mock up was made and the design implemented and refined.
- 11:15 AM Bug #3666: Create RIO schema
- The RIO Schema has been created.
- 11:14 AM Bug #3646: Create ROML Schema
- The ROML schema has been created.
- 11:13 AM Bug #3641: Create model for ItemOfInterest
- The class 'Item' was created, and this is used to build a list of 'items'. This list has references to ports that ap...
- 11:09 AM Bug #3607: Create model for the Report Object
- The object models for the report object (ROML) and the Report Instance (RIO)
have both been created. - 11:07 AM Bug #3642: Create model for ReportItem
- The model for the report items has been created and is working well.
- 11:06 AM Bug #3645: Create report layout designer
- Report Layout Designer has been created, and is working.
- 11:04 AM Bug #3934: Report Designer - editable Report Title field
- We are now able to edit the title of the report, and it is added to the report model.
- 11:03 AM Bug #3955: Report Designer - static report item: TEXT
- The ability to edit the text in a 'Label' static report item has been implemented.
- 11:02 AM Bug #3955: Report Designer - static report item: TEXT
- The ability to edit the text in a 'Label' static report item has been implemented.
- 10:59 AM Bug #3959: Report Designer - Highlight and select a report item panel
- The ability to highlight and select a report item panel is now working. Panels are selected when the user clicks on ...
- 07:54 AM Bug #4038: The first time ant change-to is run, it prints a stack trace
- This is fixed, I can no longer reproduce it.
- 07:48 AM Bug #4053: deleting open composite actor may delete model
- This is fixed by changes to PtolemyFrame.
05/18/2009
- 02:48 PM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- this is now an EML 2.1.0 document. Kepler does not yet have support for 2.1.0.
Will look into that - there is a bug f... - 11:07 AM Bug #4051: R - include R distribution in separate module
- R is now in it's own module and the installer can install it separately.
- 09:49 AM Bug #4082 (Resolved): New user guide section on modules/module manager
- Need to write a new section of documentation on modules and the module manager. Other sections need to be able to re...
- 09:48 AM Bug #4081 (Resolved): Rework Appendix B
- Rework Appendix B of the User Manual for the 2.0
release. - 09:47 AM Bug #4080 (Resolved): Rework Section 11
- Rework Section 11 of the User Manual for the 2.0
release. - 09:46 AM Bug #4079 (Resolved): Rework Section 10
- Rework Section 10 of the User Manual for the 2.0
release. - 09:45 AM Bug #4078 (Resolved): Rework Section 9
- Rework Section 9 of the User Manual for the 2.0
release. - 09:44 AM Bug #4077 (Resolved): Rework Section 8
- Rework Section 8 of the User Manual for the 2.0
release. - 09:44 AM Bug #4076 (Resolved): Rework Section 7
- Rework Section 7 of the User Manual for the 2.0
release. - 09:43 AM Bug #4075 (Resolved): Rework Section 6
- Rework Section 6 of the User Manual for the 2.0
release. - 09:42 AM Bug #4074 (Resolved): Rework Section 5
- Rework Section 5 of the User Manual for the 2.0
release. - 09:42 AM Bug #4073 (Resolved): Rework Section 4
- Rework Section 4 of the User Manual for the 2.0 release.
- 09:41 AM Bug #4072 (Resolved): Rework Section 3
- Rework Section 3 for the 2.0 release.
- 09:40 AM Bug #4071 (Resolved): Rework Section 2
- Rework Section 2 of the User Manual for the 2.0 release.
- 09:37 AM Bug #4070 (Resolved): Rework Section 1 and the GSG
- Rework Section 1 of the User Manual and the Getting Started Guide for the 2.0 release.
- 09:27 AM Bug #3976: Update Documentation for 2.0 release
- Thanks for volunteering, Jianwu. You've asked a good question, one that I hadn't thought of. I think we just need t...
- 09:25 AM Bug #4008: EML 2 Dataset throws errors when accessing public data from mixed public/private datasets
- i'm now getting stuck on the initializing step of the workflow... (osx)
- 09:08 AM Bug #4068: File Menu should display 5 most recently used workflows
- Hi Ben:
Yes, you're right: remembering the last used directory (even if only within a session) is convenient!
If w... - 08:43 AM Bug #4068: File Menu should display 5 most recently used workflows
- Last I knew, the "last used directory" was remembered (unless you restart Kepler). It's very convenient [for me].
05/15/2009
- 04:05 PM Bug #3976: Update Documentation for 2.0 release
- I will take care of <Section 7: Using remote computing resources>. One quick question: if we moved some actors (such ...
- 03:15 PM Bug #3976: Update Documentation for 2.0 release
- I finished going through all of the documentation in kepler-docs/outreach/documentation/working. I've made changes w...
- 01:20 PM Bug #4069: Metacat Authenticated Query fails for specific user/group/dataset combinations
- (In reply to comment #0)
> Regetz confirmed this, but he was able
> to search for a private dataset of his own.
The ... - 12:02 PM Bug #4069 (Resolved): Metacat Authenticated Query fails for specific user/group/dataset combinations
- The problem affects several datasets with similar access permissions, such as judithk.769.12.
These datasets are n...
05/14/2009
- 05:30 PM Bug #4062: Web Services and Data Transformation demo throws a StringOutOfBounds
- This error is from the web service actor. I'll look into it.
- 04:58 PM Bug #4013: Make sure duplicate jars are not included in the installer
- I wrote a build task to identify all duplicate jar files within the current suite. I identified many jar files that ...
- 03:53 PM Bug #4068 (Resolved): File Menu should display 5 most recently used workflows
- The 'File' menu in Kepler does not show the most recently opened workflows.
It would be important to have a "Recent ... - 03:43 PM Bug #4067 (Resolved): Add "about" widget for kepler on the mac
- after I changed kepler so it uses the native osx menu bar, there is now an "about kepler" menu item that uses a defau...
- 02:15 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- Filter button has been eliminated and table is populated by default, bringing WRM more in line with the mockups. 'Fil...
- 12:23 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- Sorting has been fixed.
05/13/2009
- 05:54 PM Bug #4066: Allow legacy LSIDs to be parsed, but not serialized
- I've added a kludge to the KeplerLSID class that accepts urn:lsid:<authority>:<namespace>.<object>.<revision>#<anchor...
- 04:44 PM Bug #4066: Allow legacy LSIDs to be parsed, but not serialized
- Example XML snippet was from a kruger TPC workflow that had an ImageJ actor (probably from a while back) in the workf...
- 04:43 PM Bug #4066 (Resolved): Allow legacy LSIDs to be parsed, but not serialized
- After shifting to a non-IBM implementation of LSIDs, a few workflows were encountered that had actors using dots (.) ...
- 04:11 PM Bug #4013: Make sure duplicate jars are not included in the installer
- Perhaps better yet, use a checksumming algorithm to check for duplicates. Something like:
find . -name "*.jar" |... - 11:26 AM Bug #4013: Make sure duplicate jars are not included in the installer
- This is probably an underestimate of the duplicates because I'll bet that some of the jar files that are in only once...
- 10:38 AM Bug #4013: Make sure duplicate jars are not included in the installer
- Duplicate jar list from Christopher:
bash-3.2$ find . -name "*.jar" -print | awk -F / '{print $NF}' | sort | uniq -c... - 12:47 PM Bug #4063: Kepler-1.XDev Installer is large
- For archival reasons, I think it is very important to release a
source only tar.gz file of Kepler-2.0. The reason is... - 10:37 AM Bug #4063: Kepler-1.XDev Installer is large
- The duplicate jar problem is in bug 4013. Thanks for getting a list though. I'll copy it over to that bug.
The rea... - 08:37 AM Bug #4063 (Resolved): Kepler-1.XDev Installer is large
- The Kepler-1.XDev installers are very large:
[ ] kepler-1.xDev-osx.jar 12-May-2009 14:32 212M
[ ] kepler-1... - 11:59 AM Bug #4060: Copyrights need to be updated to 2009
- Updated the copyright.htm file as well as all of the source code that I could find a copyright statement in.
- 11:10 AM Bug #4065 (Resolved): Copy documentation into installer
- Make sure the installer includes the documentation from kepler-docs and that the links in the help menu work.
- 10:32 AM Bug #4064 (Resolved): remove r installer after installation is complete
- delete the file r/module-info/R-2.9.0* after installation of kepler and R is complete to save disc space.
05/12/2009
- 07:20 PM Bug #4061: Documentation links are not active
- The previous build simply knew where to copy these from -- the pdf files needed are in kepler-docs. We should just a...
- 06:51 PM Bug #4061 (Resolved): Documentation links are not active
- In the splash screen, none of the documentation links are active.
Help -> About -> Documentation
Brings up do... - 06:54 PM Bug #4062 (Resolved): Web Services and Data Transformation demo throws a StringOutOfBounds
- Web Services and Data Transformation demo brings up an exception:
Java.lang.StringIndexOutOfBoundsException: Strin... - 06:45 PM Bug #4060 (Resolved): Copyrights need to be updated to 2009
- The copyrights need to be updated to 2009.
There are some scripts in ptII/adm/copyright.
In particular, ptolemy/c... - 01:54 PM Bug #3893: EML 2 Dataset not working with local data
- re-open:
dataFile is not being reloaded when attribute changes. - 11:02 AM Bug #3893: EML 2 Dataset not working with local data
- retargeted for bookkeeping purposes
- 11:01 AM Bug #3893: EML 2 Dataset not working with local data
- using absolute URL for the local data file even when in the same directory
- 01:16 PM Bug #4008: EML 2 Dataset throws errors when accessing public data from mixed public/private datasets
- Well, it's more than just annoying error messages. The trunk workflow doesn't work at all for me. On XP, one actor ...
- 11:04 AM Bug #3890: EML 2 Dataset has trouble with a certain data table
- works for me now. can reopen if turns out the fix was not fully adequate.
- 10:26 AM Bug #3890: EML 2 Dataset has trouble with a certain data table
- retargeting to 2.0 - want to have this resolved by then (configuration)
- 11:02 AM Bug #3892: EML 2 Dataset file path confusion
- using absolute URL now
05/11/2009
- 05:21 PM Bug #3890: EML 2 Dataset has trouble with a certain data table
- Found that "tab delimited" datatables from Morpho are using "#x09" as the character. This does not work with the HSQL...
- 01:52 PM Bug #3991: large workflow errors
- this needs to be fixed if it remains a problem - retargeting to 2.0
- 01:51 PM Bug #3991: large workflow errors
- I cleared the cache and tried opening the workflows (first the parts, then the whole).
It opens - sure there are tons... - 01:37 PM Bug #3991: large workflow errors
- yikes! that's a lot of memory.
rain.xml seems to open (eventually) for me.
Looking into the "Unable to parse the Met... - 01:08 PM Bug #3691: JButton labels truncated on macOSX
- Crawl reports the Refresh button on the Data sources is also truncated.
- 01:00 PM Bug #4036: WRM - connect to configurable provenance store
- re: comment#1, I just verified it works on linux too.
- 12:47 PM Bug #4036: WRM - connect to configurable provenance store
- Made a little progress - on the mac (and probably works on linux) the WRM now uses the top level recorder settings if...
- 12:51 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- The two bugs related to search cells getting stuck in edit mode have been fixed.
A gui bug with row highlighting has... - 10:44 AM Bug #4008: EML 2 Dataset throws errors when accessing public data from mixed public/private datasets
- I recognize that the error messages are annoying, but I'm not sure what the alternative is.
If you are authenticated ...
05/08/2009
- 09:22 AM Bug #4057: UserInteractiveShell message
- I think you need to use an InitializableDelay.
UserInteractiveShell is based on InteractiveShell, for a sample
use, ... - 07:46 AM Bug #4057 (New): UserInteractiveShell message
- The message in the UserInteractiveShell doesn't make sense, and gives a "null" at the beginning.
Here is the curre...
05/05/2009
- 06:00 PM Bug #4056 (New): create developer documentation for svn configuration.
- When svn checks in files, it checks them in using a binary mode.
This is a problem when files are checked in using w... - 04:40 PM Bug #3949: Get the installer working with the new build system
- Added functionality to the installer build task that allows it to pull in custom packs from modules. To use this, pu...
- 01:33 PM Bug #4039: matlab actor always stops matlab process in wrapup
- In order for the matlab process to persist after model execution, an engine cannot be opened in an actor's thread.
h... - 10:45 AM Bug #4010: RExpression2 - tracking for backwards compatibility
- ReadTable.xml
there's a issue with how I'm setting up the graphics device. it's purely my R code, since the followin... - 09:50 AM Bug #3985: Types resolved to unacceptable types
- It seems like the error is thrown before R even runs, in which case it probably wouldn't be a problem with R itself. ...
- 08:36 AM Bug #4022: undesired file:\ prefix added by FileParameter
- I have this problem using version 1.0.0 and on both XP and Vista. At first after you said you can't reproduce it I tr...
05/04/2009
- 07:54 PM Bug #4055 (Resolved): leftover cachedata files
- It seems that after data has been searched there are some left over data files in the .kepler/cache/cachedata directo...
- 07:12 PM Bug #4049: Import actor that already exists appends strange numbering scheme
- I've checked in a fix, but am leaving this open and changing to a feature request -- see if there's a better way to g...
- 04:15 PM Bug #4049: Import actor that already exists appends strange numbering scheme
- I should've been more clear, this is using the Kepler File => Import Archive (KAR) menu item and then looking at the ...
- 04:07 PM Bug #4049: Import actor that already exists appends strange numbering scheme
- I'm not sure how to reproduce this.
Doing Tools -> Instantiate Component over and over again creates
Ramp
Ramp2
Ramp3... - 05:46 PM Bug #4054: DataTurbine tree actor icon should be a can
- fixed.
- 05:30 PM Bug #4054 (Resolved): DataTurbine tree actor icon should be a can
- The small icon in the actor tree representing the DataTurbine actor should be a can, not the generic square.
- 05:19 PM Bug #4047: Remove Component doesn't work
- I've fixed this problem.
However the behavior should be improved, and so I'm changing this bug to a request for enha... - 12:54 PM Bug #4047: Remove Component doesn't work
- When you Remove Component, this error appears: "Error in getting actor in ShowDocumentationAction", and the actor sta...
- 04:39 PM Bug #3985: Types resolved to unacceptable types
- I downloaded this from
http://www.nceas.ucsb.edu/~soong/kepler/Unacceptable%20Types%20Problem.xml
and am uploading it... - 04:21 PM Bug #4022: undesired file:\ prefix added by FileParameter
- I can't reproduce this, the attached demo works as it should.
Is there a test case?
BTW - URL.toString() changed bet... - 03:47 PM Bug #4053: deleting open composite actor may delete model
- This is reproducible in Ptolemy.
The issue is that if a model has a composite and the composite is open,
what happens... - 03:01 PM Bug #4053 (Resolved): deleting open composite actor may delete model
- Under certain circumstances, deleting an open composite actor may result in deleting the remainder of the model. Here...
- 03:40 PM Bug #4050: dragging actors can leave artifacts until you stop dragging
- The trail of visual artifacts issue was fixed by modifying KeplerGraphTableau to
extend Tableau and then modifying Wo... - 12:41 PM Bug #4050: dragging actors can leave artifacts until you stop dragging
- I can replicate this with Display and XYPlotter actors, they both leave vertical
green lines when dragged to the left... - 03:37 PM Bug #2321: merge exp files into ptolemy CVS
- I'm closing this.
The highlight issue was fixed by modifying KeplerGraphTableau to extend Tableau
and then modifying ... - 10:06 AM Bug #2321: merge exp files into ptolemy CVS
- There are selection and highlighting issues that should be addressed before
this bug is closed. - 03:23 PM Bug #4017: Make sure module manager and installer work together wrt the classpath
- The module manager and installer both use the same bootstrapper to build the classpath. All build classes that launc...
- 03:14 PM Bug #3809: jni actors do not work
- JNI actors now work with both the installed and the ant-executed versions of kepler. The java.library.path is also a...
- 03:09 PM Bug #4010: RExpression2 - tracking for backwards compatibility
- FIXED:
RExpression_Matrix_IO_Test.xml
-matrices now handled like R wants them to be (column-major) - 02:50 PM Bug #4052 (New): Should be able to store native libraries in a kar file
- A kar file should be able to contain native libraries needed for a given actor. These libraries should be loaded at ...
- 02:48 PM Bug #3074: Code library installation issues
- libraries can now be stored in the lib directory of any module. This should allow individual modules to be able to l...
- 10:34 AM Bug #3074: Code library installation issues
- Kepler no longer relies upon installation of dlls into system32. the path variable is changed at runtime and the dll...
- 01:20 PM Bug #4051 (Resolved): R - include R distribution in separate module
- Instead of including the R dist in the core Kepler module, we want to have it in a separate module so that upgrades t...
- 12:42 PM Bug #3593: exporting an actor to kar does not save portparameters that have been defined
- Closing, seems fine.
- 12:02 PM Bug #3593: exporting an actor to kar does not save portparameters that have been defined
- This dates back to kommineni, r12215: "addAttribute method has been changed to eliminate duplicate entries in moml fi...
- 11:34 AM Bug #4029: missing dependency for tools.jar in windows
- Fixed in
https://kepler-project.org/developers/reference/kepler-and-eclipse
https://kepler-project.org/developers/te... - 11:29 AM Bug #4028: Nondeterministic Merge Actor doesn't generate output
- Solved the bug by reverting the change made in version 53061 (which was committed with message "Eclipse: removed unus...
- 11:25 AM Bug #4028: Nondeterministic Merge Actor doesn't generate output
- 53042 version of NondeterministicMerge works for me. Thanks for your work.
- 11:14 AM Bug #4028: Nondeterministic Merge Actor doesn't generate output
- Does your model work if you revert the version of NondeterministicMerge back to 53042? In the next modification in th...
- 11:10 AM Bug #3999: WRP - create event-driven states for Kepler
- TODO: design document.
- 10:52 AM Bug #3999: WRP - create event-driven states for Kepler
- Added Morpho-based "event-state" module to be use for communicating between tabs/views.
Likely need modifications to ... - 10:56 AM Bug #3931: Get the R actor working with JNI
- The more I/We work with the RNI implementation of this actor, I believe we'll need to seriously consider using some o...
- 10:32 AM Bug #3097: incorrect classpath in generated ptexecute.sh and momlexecute.sh
- Execution now pauses. Will break "- MoMLSimpleApplication does not filter Display actor or any GUI Kepler actors." i...
05/01/2009
- 06:01 PM Bug #3593: exporting an actor to kar does not save portparameters that have been defined
- Checked in a fix.
We were intentionally skipping adding PortParameters when exporting to an actor kar. Does anyone ... - 03:21 PM Bug #3593: exporting an actor to kar does not save portparameters that have been defined
- I note that when I set a portparameter in an actor within a composite, and then export the composite, the value is sa...
- 04:03 PM Bug #4050 (Resolved): dragging actors can leave artifacts until you stop dragging
- Dragging some actors leaves visual artifacts until you stop dragging. The color of the artifacts seems to match the a...
- 03:37 PM Bug #4049 (New): Import actor that already exists appends strange numbering scheme
- When I import an actor that already exists, saying Yes to use the next available id, the new actor appends a numberin...
- 03:30 PM Bug #3242: dlls should not go in c:/Windows/System32
- Fixed this by allowing the bootstrapper to modify the PATH env variable at runtime. While the java.library.path vari...
- 02:09 PM Bug #3242: dlls should not go in c:/Windows/System32
- After re-reading the jguru thread that christopher posted, I added common/lib to the PATH in windows and now there is...
- 02:00 PM Bug #3242: dlls should not go in c:/Windows/System32
- On windows XP, if the dlls are not in the System32 directory, I get the following error:
ptolemy.kernel.util.Illegal... - 02:51 PM Bug #2321: merge exp files into ptolemy CVS
Hi Chad, I am currently under the impression that it would be a substantial effort to open multiple actor canvases i...- 02:34 PM Bug #2321: merge exp files into ptolemy CVS
- Enabling multiple tabs to be opened in one window is a feature we already identified and mocked up as part of the rep...
- 01:08 PM Bug #2321: merge exp files into ptolemy CVS
- Just noticed something weird about this. If you draw a rubber-band box around the actors, the selection is shown, bu...
- 02:34 PM Bug #4048 (New): Get error message when too much code in single R actor
- I have an R actor that has quite a few lines of code. It seems that when I have more than 3,224 (I think) characters ...
- 01:42 PM Bug #4047 (Resolved): Remove Component doesn't work
- Right click an actor in library, Remove Component doesn't remove it from the tree.
- 01:05 PM Bug #4046 (New): ComadTest should report more details when detecting an error
- The ComadTest actor is used to create automated tests of COMAD features. Because it is often useful to include sever...
04/30/2009
- 06:17 PM Bug #3691: JButton labels truncated on macOSX
- Good point, I haven't seen any others so far. If anyone sees any other button label truncation please report here.
- 05:53 PM Bug #3691: JButton labels truncated on macOSX
- Looks great to me, Derik.
By the way, is this the only place where button labels were truncated, or are there othe... - 05:51 PM Bug #3691: JButton labels truncated on macOSX
- I'll leave this open for now until others have had a chance to see the new ui and possibly object.
- 05:48 PM Bug #3691: JButton labels truncated on macOSX
- I've checked in a fix; I made the buttons 11px bigger. I've removed some other spacing trying to minimize the widenin...
- 05:05 PM Bug #2569: Popup (context) menu do not appear for relations and connections
- Fixed by editing
common/configs/ptolemy/configs/kepler/uiContextMenuMappings_en_US.properties
The way to fix these i... - 04:54 PM Bug #3932: Configure Actor actor context menu item missing
- Fixed by editing
common/configs/ptolemy/configs/kepler/uiContextMenuMappings_en_US.properties
Added comment about deb... - 10:28 AM Bug #4041 (New): synchronization in matlab actor
- The matlab actor starts a new matlab process in preinitialize and closes it in wrapup. Each instance of the actor in ...
- 10:05 AM Bug #2321: merge exp files into ptolemy CVS
- I've made changes and removed util/src/ptolemy.
One remaining issue is ActorGraphFrame, see the discussion below.
I'v... - 10:04 AM Bug #4040 (New): make a new module called globus to host globus actors and needed packages.
- we have duplicate globus libs in current build system: common\etc\cog\, util\lib\jar\globus\lib, util\lib\jar\globus\...
- 09:58 AM Bug #2363: Move Actions out of BasicGraphController
- I'm closing this, I created
util/src/org/kepler/gui/SemanticSearchDialogAction.java
util/src/org/kepler/gui/WorkflowT... - 09:54 AM Bug #4039 (New): matlab actor always stops matlab process in wrapup
- The matlab actor always stops the matlab process when model execution ends. It would be nice if the actor could (opti...
- 09:33 AM Bug #4038: The first time ant change-to is run, it prints a stack trace
- I'm also seeing this behavior. It looks like it's trying to read the modules.txt file before it gets checked out.
- 09:09 AM Bug #4038 (Resolved): The first time ant change-to is run, it prints a stack trace
- The first time I run ant change-to under Windows, I get:
change-to:
[change-to] java.io.FileNotFoundException: c:... - 09:15 AM Bug #3988: Rectangle shifts position on resize
- I'm closing this, my solution was to modify the configuration
so that new RectangleAttributes are created with center...
04/29/2009
- 06:24 PM Bug #4034: "Invalid memory access" when running workflow from the command line
- re-assigning to David - maybe he can shed some light on what might be happening.
(Unfortunately it seems like it migh... - 06:08 PM Bug #4034: "Invalid memory access" when running workflow from the command line
- This same error occurs when we use the "run-workflow" ant target:
$> ant run-workflow -Dworkflow=../common/demos/gett... - 06:00 PM Bug #4034: "Invalid memory access" when running workflow from the command line
- removing the call to the EcogridService does not fix the invalid memory error. This doesn't have to do with that serv...
- 04:04 PM Bug #4034: "Invalid memory access" when running workflow from the command line
- reverting to an older org.ecoinformatics.ecogrid.RegistryService-stub.jar version did not work (still had the same er...
- 02:52 PM Bug #4034 (Resolved): "Invalid memory access" when running workflow from the command line
- When running even very simple workflows from the command line, Kepler fails with the following output. For some reas...
- 05:16 PM Bug #3332: RExpression_Matrix_IO_Test workflow gives an error
- Yep, I no longer see this bug on either Mac or Linux, closing.
- 05:09 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
- You can rearrange columns now and they'll stay in sync with the search header.
Column specific default text now works... - 03:18 PM Bug #4037 (Resolved): WRM - connect to Kepler-wide configurable provenance store
- This is Phase 2 for the WRM interface:
-Add a Kepler-wide provenance configuration. The intent is that the WRM inter... - 03:11 PM Bug #4036 (Resolved): WRM - connect to configurable provenance store
- Currently the WRM viewer connects to the default provenance store specified in a .properties bundle in the WRM module...
- 03:06 PM Bug #4035: MoMLSimpleApplication does not filter Display actor or any GUI Kepler actors.
- See bug 3097 for the provenance of this bug.
- 03:05 PM Bug #4035 (New): MoMLSimpleApplication does not filter Display actor or any GUI Kepler actors.
- When you run a -nogui kepler run, MoMLSimpleApplication should have the ability to filter some of the gui elements in...
- 03:03 PM Bug #3097: incorrect classpath in generated ptexecute.sh and momlexecute.sh
- Update:
>2. (from comment #6) pause before exiting when running with '-gui'.
I'm looking into this now. I'm not ex... - 02:58 PM Bug #3634: Define the interface between Provenance and Reporting
- we have this look up implemented now - closing
- 02:56 PM Bug #3949: Get the installer working with the new build system
- Since R is now in its own module, the installer not only has to have the option to install R, but also to install the...
- 02:53 PM Bug #3990: Include "workflow-run-manager" module in "wrp" suite
- closing this - now running with the real WRM in the "wrp" module
- 01:58 PM Bug #3990: Include "workflow-run-manager" module in "wrp" suite
- I've removed the [placeholder] WRM screen from reporting's config and module.
I've added the WRM module to the wrp su... - 02:27 AM Bug #4033: Can't compile, MakeKars not found
- Fixed.
04/28/2009
- 08:48 PM Bug #2321: merge exp files into ptolemy CVS
- Open Actor and Convert to Class are in the actor context menu for me
in a clean checkout, after
mkdir kepler
cd kepl... - 07:22 PM Bug #4033 (Resolved): Can't compile, MakeKars not found
- I can't get the head to build, and the compiler is complaining it can't find MakeKars. Revision 17442 will compile, ...
- 12:51 PM Bug #3998: Report Viewer - render Report Instance on???Event
- I've got the "event-state" module in Kepler now. It's based on the Morpho event management classes.
The "test" button... - 12:01 PM Bug #3986: RExpression confounding R working directory and .kepler folder
- we might consider removing this parameter since it's not really useful and will loose any utility it provides once we...
- 11:56 AM Bug #3986: RExpression confounding R working directory and .kepler folder
- I was under the impression the R working directory (Rwd) was a parameter to set the working directory of the R actor,...
- 11:58 AM Bug #4026: Bootstrapper will not run kepler in a directory with spaces
- This was actually a problem with the lib path, not the classpath. The classpath is handled internally by the Java an...
04/27/2009
- 07:03 PM Bug #4025: XSLTActor accepts StringToken as input
- The input port can now read either xml or string tokens.
- 07:02 PM Bug #3970: XSLT unnecessarily writes to a file
- XSLTActor no longer writes the output to a temporary file.
- 07:01 PM Bug #3968: XSLTActor temporary file bug
- XSLTActor no longer writes the input XML to a temporary file.
- 04:04 PM Bug #3332: RExpression_Matrix_IO_Test workflow gives an error
- Derik - are you still seeing this bug?
I do not encounter the parsing error ("4L" etc...)
I believe we changed some t... - 03:42 PM Bug #3986: RExpression confounding R working directory and .kepler folder
- i see that it fails until you game the type lattice, but afterward I believe this functions as designed.
The "R worki... - 02:20 PM Bug #2321: merge exp files into ptolemy CVS
- After the merge of ActorController, Open Actor and Convert to Class are no longer in the context menu for actors.
- 08:51 AM Bug #2321: merge exp files into ptolemy CVS
- ptolemy/vergil/actor/ActorController.java has been updated.
A ListenToActor action was added to the version in the pt... - 12:29 PM Bug #4029 (Resolved): missing dependency for tools.jar in windows
- The documentation fails to mention the need for a dependency on tools.jar in setting up building Kepler with Eclipse ...
- 12:01 PM Bug #3739: Issues in inferring data lineage via the provenance recorder
- 1, 2: version 8 of the schema explicitly includes token dependencies, and can be queried using the Queryable interfac...
- 10:34 AM Bug #3649: determine if Provenance has everything needed by Reporting
- Derik and I were talking about how the schema could accommodate more than just the MOML file. Currently there is a co...
- 10:19 AM Bug #2315: Unable to run multiple Kepler instances simultaneously
- set the error writer for the DB server to null unless debug log level is enabled.
this prevents the stacktrace from s... - 10:17 AM Bug #3917: refactor schema creation code out of recording classes
- Schema creation code has been separated.
04/25/2009
- 05:45 PM Bug #4028: Nondeterministic Merge Actor doesn't generate output
- The change after 52467 is:
2009-02-25 16:20 rodiers
> * [r52468]
> /trunk/ptolemy/domains/pn/kernel/Nondetermini... - 04:03 PM Bug #4028 (Resolved): Nondeterministic Merge Actor doesn't generate output
- My workflow that used to work but does not work now. Finally I found out it is because I can not get output the Nonde...
- 04:27 PM Bug #3988: Rectangle shifts position on resize
- I might have this one fixed, Edward may have some comments.
It turns out that RectangleAttribute and ResizablePolygo... - 02:13 PM Bug #2315: Unable to run multiple Kepler instances simultaneously
- When I run two instances of Kepler using "ant run", I see the message:
[run] Building Kars...
[run] [Serve... - 01:19 PM Bug #3128: Kepler devel tree can't be compiled in java 1.6.0: DBConnection problem
- DBConnection has been removed since it provided trivial functionality.
Kepler now compiles with java 1.6.
- 12:25 PM Bug #3363: Show name checkbox does nothing for most Parameters
- Fixed!
The solution here was to edit ptolemy/actor/gui/RenameConfigurer.java
and not add the "Show name" checkbox if ... - 10:07 AM Bug #3984: RequireVersion parameter cannot be deleted from a saved workflow
- Fixed!
The problem was that it was not possible to delete a RequireVersion Attribute
from a saved model. One could a...
Also available in: Atom