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From 06/25/2009 to 07/24/2009

07/24/2009

12:12 PM Bug #4255: Add Online Javadocs
The javadocs for the latest nightly build are now here:
http://dist.kepler-project.org/dist/nightly/javadoc/
The nig...
Chad Berkley
10:14 AM Bug #4259: Fix the 'ant javadoc' command
There is slightly different code that execs a subprocess at
ptolemy/util/StreamExec.java
This code does not use much ...
Christopher Brooks
07:52 AM Bug #4261: Long file name on windows
(In reply to comment #1)
> I think under Windows XP, the path can only be 256 characters, see
> http://www-01.ibm.co...
Chris Weed

07/23/2009

04:23 PM Bug #4256: Change to AbstractReceiver prevents putArray() from being called
Bert Rodiers fixed this, the change has been merged into the 8.0.beta branch.
The fix was to revert the change in Ab...
Christopher Brooks
03:26 PM Bug #4261: Long file name on windows
It looks like longest files are properties tests.
I ran
find . -type f | awk '{print length($0), $0}' > /tmp/f2
bash-...
Christopher Brooks
11:52 AM Bug #4261: Long file name on windows
I hit this same error on the nightly builds. It's mainly because of how SVN duplicates all of the files in the .svn ... Chad Berkley
09:19 AM Bug #4261: Long file name on windows
I think under Windows XP, the path can only be 256 characters, see
http://www-01.ibm.com/support/docview.wss?rcss=fa...
Christopher Brooks
09:03 AM Bug #4261 (Resolved): Long file name on windows
When I tried to copy my directory of the kepler source files to a windows box, I got an error about a long filename a... Chris Weed
03:19 PM Bug #4259: Fix the 'ant javadoc' command
I got the javadoc command working through ant, but only if I exclude the ptolemy source. I'm not sure what is causin... Chad Berkley
12:22 PM Bug #4259: Fix the 'ant javadoc' command
I got the ptolemy tree running fine from the command line. I think the ant task is not attaching std.err correctly (... Chad Berkley
06:37 PM Bug #4022: undesired file:\ prefix added by FileParameter
0) Under Windows XP, on Desktop create directories:
test/data
test/workflow
1) Save attached dataFile.txt into test...
Derik Barseghian
06:35 PM Bug #4022: undesired file:\ prefix added by FileParameter
workflow which illustrates FileParameter bug Derik Barseghian
06:34 PM Bug #4022: undesired file:\ prefix added by FileParameter
dataFile used by workflow.xml Derik Barseghian

07/22/2009

04:49 PM Bug #4259: Fix the 'ant javadoc' command
BTW - javadoc runs ok on the ptolemy tree.
Looking at the stack trace, it is almost like it
This is with:
[bldmastr...
Christopher Brooks
04:09 PM Bug #4259: Fix the 'ant javadoc' command
This seems to run now from the command line, but not from ant. Might be a memory problem. Chad Berkley
03:52 PM Bug #4259: Fix the 'ant javadoc' command
We seem to be running into this bug:
http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=5082928
By not generating pt...
Chad Berkley
11:24 AM Bug #4259 (Resolved): Fix the 'ant javadoc' command
The 'ant javadoc' command hangs. Chad Berkley
02:18 PM Bug #4257: ant update should update build-area
added the ability of the UpdateModules task to update the build-area. It can be turned off by setting updateBuildAre... Chad Berkley
11:21 AM Bug #4257 (Resolved): ant update should update build-area
Problems are caused when the build-area is not updated with 'ant update' We should at least have a switch to force t... Chad Berkley
11:25 AM Bug #4260 (New): Add a test suite for the build system
Need to create a testing harness for the build system to ensure that all functionality remains working as new feature... Chad Berkley
11:22 AM Bug #4258 (Resolved): Add java 1.6 to nightly build
Need to add some java 1.6 hosts to the nmi build. Chad Berkley
10:18 AM Bug #4256 (Resolved): Change to AbstractReceiver prevents putArray() from being called
Here's a bug from 5/13.
I agree that the problem is that putArray()
is no longer being called, which is being ove...
Christopher Brooks
09:39 AM Bug #4035: MoMLSimpleApplication does not filter Display actor or any GUI Kepler actors.
I'm looking over old bugs.
Can this bug be closed?
ant run-workflow-no-gui filters the Display actor out and runs
in...
Christopher Brooks

07/21/2009

11:31 AM Bug #3529: cannot always set parameters when running workflow from command line
Parameters can now be passed when using -nogui.
Additionally, 'ant startup-script' creates kepler.sh so you don't n...
Daniel Crawl
11:03 AM Bug #4255 (Resolved): Add Online Javadocs
We need to add the javadocs for released versions of kepler to the website. Chad Berkley
05:49 PM Bug #4254: wrapping up, never ending workflow! (PN inside PN)
Model from Josep Maria Campanera Alsina. The model runs
and then never terminates, it gets stuck on "wrapping up"
Christopher Brooks
05:47 PM Bug #4254 (New): wrapping up, never ending workflow! (PN inside PN)
[I'm going through my email logs looking for bugs that have
not really been solved.]
The problem is that a trivia...
Christopher Brooks
05:00 PM Bug #4250: Add other suites to the nightly build
Added the WRP suite to the NMI build. If you want your suite added, let me know. Chad Berkley

07/17/2009

11:47 AM Bug #3708: Case actor issues

1) I updated KeplerGraphFrame so that composite entities providing a tabbed interface, such as the Case actor, will ...
Daniel Crawl
10:03 PM Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives
I believe I have the trackpad / single button mouse wrm jtable context menu bug fixed, locally. Will check in the fix... Derik Barseghian

07/16/2009

02:05 PM Bug #4199: NPE in org.kepler.moml.NamedObjId
Fixed. There were two bugs: dereferencing a null container, and sometimes the referral list attribute was being creat... Daniel Crawl
11:40 AM Bug #4249: create 64 bit installers
Added functionality to the build system to build the 64 bit installer. Changed the disclaimer on the web site and in... Chad Berkley
11:12 AM Bug #4252: Workflow Run Manager - deleting a run before running a wf doesn't work
Fixed: needed connection to database before issuing SQL delete. Daniel Crawl
06:21 PM Bug #4251: Workflow Run Manager - wrong rows when operating on re-sorted table
I believe I've fixed this in r19997. Will leave open a little while longer for more testing. Derik Barseghian

07/15/2009

04:39 PM Bug #4252 (Resolved): Workflow Run Manager - deleting a run before running a wf doesn't work
With my r19997 check-in i've added this bug where you now get an NPE if you try to delete a run from WRM before runni... Derik Barseghian
02:43 PM Bug #4251 (Resolved): Workflow Run Manager - wrong rows when operating on re-sorted table
If you sort the table into a non-default state (by single clicking on a column header some number of times), and then... Derik Barseghian
01:00 PM Bug #4250 (Resolved): Add other suites to the nightly build
Need to add suites besides just kepler to the nightly build. Chad Berkley
12:45 PM Bug #4249 (Resolved): create 64 bit installers
We can now create 64 bit installers for kepler, so I need to add a build target to do that and remove the disclaimers... Chad Berkley

07/14/2009

03:10 PM Bug #4248 (Resolved): export dialogs should show default extension
Right now exporting an archive (or a run archive with the workflow-run-manager module) forces the kar extension onto ... Derik Barseghian
12:50 PM Bug #4247: Application menu items sometimes disappear on OS X
This happened to me yesterday after I got a moml exception. Chad Berkley
12:49 PM Bug #4247 (Resolved): Application menu items sometimes disappear on OS X
I'm not sure the cause of this yet, but occasionally lately I've been finding myself with a kepler window open, but o... Derik Barseghian
11:40 AM Bug #4063: Kepler-1.XDev Installer is large
Have paired down the installers as much as possible now. We will release a src and bin version of the installers. A... Chad Berkley
11:38 AM Bug #3672: Open/Save Workflow as KAR Archive
For this bug to be closed, the following functionality should work:
* Save a kar locally and to the local repository...
Chad Berkley
11:33 AM Bug #4246 (In Progress): Reorganize code in util, core and gui modules
The code in the main modules still needs to be reorganized a bit. There is gui code in core that needs to be moved t... Chad Berkley

07/13/2009

04:57 PM Bug #4244: Dragging ImageAttribute into Kepler results in not finding the gif
If this is not fixed in 2.0, then these actors should be removed and
any Ptolemy demos that use them removed from Kep...
Christopher Brooks
03:49 PM Bug #4244: Dragging ImageAttribute into Kepler results in not finding the gif
Below are some of the actors that call setExpression on $CLASSPATH
or $PTII and presumably include a resource in the ...
Christopher Brooks
12:57 PM Bug #4244 (Resolved): Dragging ImageAttribute into Kepler results in not finding the gif
Start Kepler
Search for ImageAttribute
Drag in the Image icon.
The following exception appears.
I think this is...
Christopher Brooks
04:29 PM Bug #4203: use port parameters in web service actors
I still need to update WSWithComplexTypes. Daniel Crawl
04:14 PM Bug #4203: use port parameters in web service actors
looks like this has been fixed. Chad Berkley
04:08 PM Bug #3948: Create new configuration system supporting modules
*** Bug 4088 has been marked as a duplicate of this bug. *** Chad Berkley
04:08 PM Bug #4088: Create new configuration system
duplicate of 3948
*** This bug has been marked as a duplicate of bug 3948 ***
Chad Berkley
04:04 PM Bug #3782: Kepler-trunk fails to properly read in kar files the first time after they are built.
no longer a problem. Chad Berkley
02:01 PM Bug #3949: Get the installer working with the new build system
All dependent bugs are now closed. The installers are easily built with the modular architecture. Closing this bug. Chad Berkley
02:00 PM Bug #4016: Test IZPack Installer on 64 bit machine
Oliver reports that there are problems with the installer on win64. I've added disclaimers to the web page and to th... Chad Berkley
10:20 AM Bug #4016: Test IZPack Installer on 64 bit machine
Still encountering the same bugs as before.
1. The big one. Installer will unpack and install, but after the instal...
Oliver Soong
01:59 PM Bug #4015: Add 64 bit disclaimer to installer
added to the installer. closing this bug. Chad Berkley
01:54 PM Bug #4015: Add 64 bit disclaimer to installer
Added disclaimer to the website. Chad Berkley
10:28 AM Bug #4015: Add 64 bit disclaimer to installer
it doesn't exist yet. That's why there's a bug :) Chad Berkley
10:23 AM Bug #4015: Add 64 bit disclaimer to installer
For the unaware, where is this page and statement? I only know of http://dist.kepler-project.org/dist/pre Oliver Soong

07/11/2009

06:01 PM Bug #4178: error handling with MoMLCommandLineApplication
I've changed ptolemy.moml.MoMLCommandLineApplication so that it calls
Manager.run() instead of Manager.execute().
Ma...
Christopher Brooks
05:16 PM Bug #3251: Installer Splash Screen should be an HTML Widget
Ok, readme is now an html document. Chad Berkley

07/10/2009

03:13 PM Bug #3251: Installer Splash Screen should be an HTML Widget
The problem is that the links in the installer screen are not mouse sensitive.
A textual installer readme screen look...
Christopher Brooks
02:36 PM Bug #3251: Installer Splash Screen should be an HTML Widget
I'm going to close this for now. If someone really doesn't like the textual readme, I guess we can change it but it ... Chad Berkley
02:34 PM Bug #4018: Remove non-2.0 functionality from 2.0 release
non-2.0 functionality will be determined and modularized. closing this bug for now. Chad Berkley
02:28 PM Bug #4197: Waterflow TPC demo - tracking bug
added KAR for the base workflow that includes a report layout ben leinfelder
01:00 PM Bug #4197: Waterflow TPC demo - tracking bug
added workflow for the HIGH base flow that points to DEV server so that we can demo the dynamic data loading. ben leinfelder
09:48 AM Bug #4197: Waterflow TPC demo - tracking bug
we were/are having intermittent problems rendering images created in kepler on the report - this is deep in FOP/xmlgr... ben leinfelder
02:26 PM Bug #4013: Make sure duplicate jars are not included in the installer
At least most jars have been checked. There are probably still a few duplicates, but the major ones have been remove... Chad Berkley
02:17 PM Bug #4159: Cut 2.0-alpha/SanParks release
Kepler 2.0.0-pre-alpha1 is now released. I've documented the build branching arguments in the build instructions her... Chad Berkley
01:57 PM Bug #4239: Report Designer - PC issue - Grey backgrounds.
Also grey for the dynamic report item icon. debi staggs
01:39 PM Bug #4239 (Resolved): Report Designer - PC issue - Grey backgrounds.
On the PC, the following items are rendered with a grey background instead of white. :
delete button
all report i...
debi staggs
01:56 PM Bug #4242 (Resolved): Report Designer - PC issue - Improve the cursors.
The cursors on the PC need some work as follows:
The drag cursor doesn't change to an arrow when you are over the ...
debi staggs
01:50 PM Bug #4241 (Resolved): Report Designer - Can't select text in the Section Header static report item
If you want to select the text in the Section Header static report item, so that you can copy it using keyboard comma... debi staggs
01:45 PM Bug #4240 (In Progress): Report Designer - Menus with Copy, Cut, and Paste as related to Text Fields / Section Headers
When you select text that is in a text field or section header, users might try to use the Kepler menus to copy, cut,... debi staggs
01:24 PM Bug #4238 (Resolved): Report Designer - Improve the listeners for the static items.
Right now there is a mouse listener that takes the values from the section static report item field and puts it into ... debi staggs
01:03 PM Bug #4237 (Resolved): Report Designer - Replace the image icon, not the + sign.with the thumbnail of the user selected file.
Currently, when you choose a file for the static image it puts a thumbnail of that image into the report item panel, ... debi staggs
12:58 PM Bug #4236 (Resolved): Report Designer - Can't add two static image items and then change their images.
If you add two static image items all is well when you first assign the images to the items. You can also successfull... debi staggs
12:47 PM Bug #4235 (Resolved): Report Designer - Clear the values for the Image Static report item.
Right now, when a user swaps static images in the report, it doesn't clear the path value for the image file first, i... debi staggs
11:34 AM Bug #4233 (Resolved): Workflow View - Need to change old instructions on how to generate a report.
In the workflow view there are old instructions that explain how to generate a report they begin with the following:
...
debi staggs
11:33 AM Bug #4198: important sanparks tasks
All of this stuff presumably works now, so closing this bug. Chad Berkley
11:27 AM Bug #4232 (Resolved): LibraryIndex Unique Identifier
Currently the Component library uses the name of the NamedObj as the unique identifier. This is not a good idea when... Aaron Aaron
10:46 PM Bug #4228: Not all tokens seem to be written when running WF from commandline
closing for now ben leinfelder
07:21 PM Bug #4229: rename runs with untitled workflow name when the user does a Save
Done! Daniel Crawl

07/09/2009

04:31 PM Bug #4196: Report Designer - Easier to Grab Panels
Improved, and I think working fairly well, the user just has to grab somewhere in the panel that is not a button or a... debi staggs
04:29 PM Bug #4128: Improve reporting static item icons
Fixed for now, but improvement can always be improved. debi staggs
11:21 AM Bug #4094: new Unnamed windows should have a suffix that increments
New windows are now called Unnamed1, Unnamed2, etc. Daniel Crawl
11:18 AM Bug #2369: Scrollbars Disappear After Using Fullscreen Mode--Now crashes
I've disabled full screen mode since it crashes returning from full screen. (See my comments why this occurs in Keple... Daniel Crawl
06:15 PM Bug #4231 (Resolved): Workflow Run Manager - failed runs should be highlighted red
If a run fails the row should be red in the WRM. To this end I've added an errorMessage string to the WorkflowRun cla... Derik Barseghian
06:03 PM Bug #4140: Workflow Run Manager - delete runs functionality needs to be written
The confirmation dialog is in place. It looks different from other kepler confirmation dialogs; I probably need to ge... Derik Barseghian
06:02 PM Bug #4133: Workflow Run Manager - column widths should be size appropriately
I think the WRM columns are sized reasonably by default now. Derik Barseghian
05:57 PM Bug #4230 (Resolved): problem associating errors with particular execution
In SDF provenance records to the error table an exception thrown after the workflow stops. In PN, multiple exceptions... Derik Barseghian
05:47 PM Bug #4229 (Resolved): rename runs with untitled workflow name when the user does a Save
Dan and I have been discussing this today, and he's working on it. When a user creates a workflow, runs it a number o... Derik Barseghian

07/08/2009

01:33 PM Bug #4019: Workflow View in left pane
So this has changed a bit. The idea now is not to have a separate tab for workflows but to have a folder in the Comp... Aaron Aaron
11:23 AM Bug #4197: Waterflow TPC demo - tracking bug
when I add another port named "trigger" to the "Plot base flow" actor and connect a similar output port from the upst... ben leinfelder
11:21 AM Bug #4197: Waterflow TPC demo - tracking bug
when running from the command line the "Plot base flow" R actor is not fired and no tokens are being recorded (as you... ben leinfelder
11:14 AM Bug #4228: Not all tokens seem to be written when running WF from commandline
tracked down one issue - was looking up token type/value based on the read row in provenance even though we were inte... ben leinfelder
08:39 AM Bug #4228: Not all tokens seem to be written when running WF from commandline
If you can figure out how to call exportMoML() on the top level, then
you can get the moml after the filter is run. ...
Christopher Brooks
08:26 AM Bug #4228 (Resolved): Not all tokens seem to be written when running WF from commandline
I'm still trying to isolate the problem, but I'm finding that a RecordToken is not "fully" being written to provenanc... ben leinfelder
09:28 AM Bug #3874: ptolemy.util.StringUtilities.mergePropertiesFile() deletes properties
Fixed. I'm not sure what the cause is here, I can't get a small test to fail.
Basically, we read the system properti...
Christopher Brooks
06:54 PM Bug #3874: ptolemy.util.StringUtilities.mergePropertiesFile() deletes properties
Ok, I can replicate a problem in Kepler under Windows XP
If I do:
cp $PTII/lib/ptII.properties ../ptolemy/lib
Then "...
Christopher Brooks

07/07/2009

03:12 PM Bug #4196: Report Designer - Easier to Grab Panels
*** Bug 4204 has been marked as a duplicate of this bug. *** debi staggs
03:11 PM Bug #4196: Report Designer - Easier to Grab Panels
Moving this bug to the next release, since changing the layout will require some additional time to get the panels to... debi staggs
03:12 PM Bug #4204: Report Designer - finding drag area on components is hard
We are postponing this bug until the next release. Fixing requires some time-consuming changes to how we are laying ... debi staggs
09:52 AM Bug #4204: Report Designer - finding drag area on components is hard
Is this being addressed or are we postponing until later? ben leinfelder
03:07 PM Bug #4195: Report Designer - 'Location aware' rendering of newly dropped panels.
Moving this enhancement to the next release, since it will touch some of the core functionality of the report designe... debi staggs
03:03 PM Bug #4226: Report Designer - use 16pt bold for Report Title text field
The fonts for the Title text field and the Section text field have been changed, so the the font for the Title text f... debi staggs
09:25 AM Bug #4226 (Resolved): Report Designer - use 16pt bold for Report Title text field
The stylesheet for rendering the report (as pdf) has the following defaults:
Title: 16pt bold
Section Header: 14pt ...
ben leinfelder
01:18 PM Bug #4224: New LSID generated when opened from KAR
This was an artifact of old code in KeplerGraphTableau that updated the LSID of a workflow if the existing authority ... Aaron Aaron
12:58 PM Bug #4197: Waterflow TPC demo - tracking bug
"nil" DoubleTokens will remain "nil" (rather than NaN) ben leinfelder
09:29 AM Bug #4197: Waterflow TPC demo - tracking bug
For the tutorial:
-we will use the "base" workflow with production data. Most slides and hands-on activities will use...
ben leinfelder
09:21 AM Bug #4197: Waterflow TPC demo - tracking bug
Changes made by Jim:
-month and river are now strings (rather than factors (ie. ints).
-rounding done to 4 places.
C...
ben leinfelder
09:51 AM Bug #4161: Develop kepler workflow execution engine
we've had a couple successful "round trip" runs:
-upload a workflow KAR (indus)
-schedule execution (indus)
-execute ...
ben leinfelder
09:47 AM Bug #4227 (Resolved): Provenance - use Integer return type in Queryable interface
Found out that resultset.getInt(x) will return 0 when in fact there was a null (no result). Changed to not start IDs ... ben leinfelder
09:42 AM Bug #4225: Provenance - start auto-incremented IDs at 1 not 0
Dan changed the auto-increment start for HSQLDB to be 1. Works great.
Merged from trunk to our sanparks branch
There...
ben leinfelder
10:11 PM Bug #4225 (Resolved): Provenance - start auto-incremented IDs at 1 not 0
I inadvertently noticed that when I queried for the last execution of a workflow that never ran I was still getting b... ben leinfelder
09:05 AM Bug #4221: Report Viewer - Need more space between each element
added padding to the top and bottom of item cells - seems better. re-open if this did not address the specific concerns. ben leinfelder
10:55 PM Bug #4221: Report Viewer - Need more space between each element
which ones in particular? ben leinfelder
10:48 PM Bug #4222: Report Designer - icon for the static graphic image switches back to generic icon after a drop
I think keeping the proportions of the original image is better. Yes, it's nice to have consistent icons on the items... ben leinfelder
05:16 PM Bug #4222: Report Designer - icon for the static graphic image switches back to generic icon after a drop
Yes, it is still being scaled to a 30 x 30 square. It can be a rectangle or some percentage of the original image, b... debi staggs
10:42 PM Bug #4220: Report Viewer - South label is not being rendered
was using the wrong xpath for the south label. ben leinfelder
10:21 PM Bug #4223: Report Viewer - Text runs over edge of button for 'Refresh using current layout'
commented out the button for now. It was also confusing for most users - especially since it could result in wildly d... ben leinfelder
09:49 PM Bug #4223: Report Viewer - Text runs over edge of button for 'Refresh using current layout'
I've been meaning to remove the button altogether - this seems like just the motivation to do it! ben leinfelder

07/06/2009

04:33 PM Bug #4224 (Resolved): New LSID generated when opened from KAR
When a KAR is opened on a computer that did not save it, the LSID of the workflow/model is changed.
See attached KAR...
ben leinfelder
02:31 PM Bug #4222: Report Designer - icon for the static graphic image switches back to generic icon after a drop
is it still scaling it to a square so that some images look squashed in certain directions? ben leinfelder
02:25 PM Bug #4222: Report Designer - icon for the static graphic image switches back to generic icon after a drop
A thumbnail version of the user-assigned image is shown as an icon for the static image, if they have selected one. ... debi staggs
11:07 AM Bug #4222 (Resolved): Report Designer - icon for the static graphic image switches back to generic icon after a drop
You can choose a custom icon for the static graphic image, when you select the graphic for the static image, and the ... debi staggs
12:40 PM Bug #4220: Report Viewer - South label is not being rendered
retarget for 2a1 ben leinfelder
11:01 AM Bug #4220 (Resolved): Report Viewer - South label is not being rendered
The south label and its value is being created in the model correctly,(it seems) but it is not showing up in the repo... debi staggs
11:14 AM Bug #3874: ptolemy.util.StringUtilities.mergePropertiesFile() deletes properties
I just saw this bug occur on windows xp: if $PTII/lib/ptII.properties exists, Kepler won't start:
[run] Caused by: j...
Daniel Crawl
11:13 AM Bug #4223 (Resolved): Report Viewer - Text runs over edge of button for 'Refresh using current layout'
In the report viewer the text for the button that says "Refresh using current layout' runs over the edges of the button. debi staggs
11:03 AM Bug #4221 (Resolved): Report Viewer - Need more space between each element
Elements in the report view should have some regular spacing between each element. debi staggs
10:37 AM Bug #4219 (New): "Kepler Repositories" should be retrieved from the registry
Currently we use a combination of 2 .properties files to make actor/workflow/run library repositories available for u... ben leinfelder
10:35 AM Bug #4140: Workflow Run Manager - delete runs functionality needs to be written
There should also be a confirmation dialog for deletion, 'Are you sure you want to delete these runs?' Derik Barseghian

07/03/2009

07:31 PM Bug #4140: Workflow Run Manager - delete runs functionality needs to be written
delete functionality added in r19815.
todo:
- check if we need to also delete runs from objectmanager and/or cache.
...
Derik Barseghian
05:20 PM Bug #4218: Report Designer - difficult to enter text for Item labels
The window was getting the focus instead of the label. It is fixed now. debi staggs

07/02/2009

03:56 PM Bug #4218 (Resolved): Report Designer - difficult to enter text for Item labels
Clicking in the text area for a dynamic item label rarely keeps my cursor in the field - so I can't really type a lab... ben leinfelder
11:46 AM Bug #4159: Cut 2.0-alpha/SanParks release
Added new functionality to the build system. This is checked into the branch, but not into the trunk. Should probab... Chad Berkley
10:53 AM Bug #4217: Report Viewer - "nil" not rendering consistently/correctly
committed to the branch. ben leinfelder
08:36 AM Bug #4217: Report Viewer - "nil" not rendering consistently/correctly
This is also happening for DoubleTokens - but they show as NaN rather than nil - which I believe is acceptable.
Boole...
ben leinfelder
06:11 PM Bug #4217: Report Viewer - "nil" not rendering consistently/correctly
added special handling when we have IntToken.NIL in the report instance
NEED TO COMMIT TO BRANCH
ben leinfelder
06:00 PM Bug #4217: Report Viewer - "nil" not rendering consistently/correctly
After some digging, I'm going to conclude that this is being introduced by the "deep copy" serialization technique fo... ben leinfelder
05:41 PM Bug #4217: Report Viewer - "nil" not rendering consistently/correctly
The PDF seems to render "nil" as "nil" whereas the AWT rendering (from Apache-FOP) sometimes shows a huge integer ins... ben leinfelder
10:52 AM Bug #4211: Report Designer - do not allow dropping of actors on report
now in branch and head ben leinfelder
09:31 AM Bug #4211: Report Designer - do not allow dropping of actors on report
wait - keeping this open until i merge to the branch ben leinfelder
09:30 AM Bug #4211: Report Designer - do not allow dropping of actors on report
now checking if the dropped object contains any children - reject the drop if it does
NEED TO COMMIT TO BRANCH
ben leinfelder
10:42 AM Bug #4199: NPE in org.kepler.moml.NamedObjId
I'm getting another exception in NamedObjId that looks related. This one can be reproduced by opening demos/getting-s... Daniel Crawl
10:04 AM Bug #4203: use port parameters in web service actors
WebService now uses port parameters. Daniel Crawl
05:29 PM Bug #4214: Report Designer - Dragging workflow components near report fields adds text to the fields
Closing this bug because it is default behavior for the text fields, not sure if there is anything we can do about it... debi staggs
05:28 PM Bug #4207: Report Designer - drop area is too small
We discussed this, and decided that it would probably be o.k. the way it is for now. debi staggs
05:27 PM Bug #4128: Improve reporting static item icons
Made the icons smaller and all the same size, but not really happy with them, I think that they are TOO small right n... debi staggs
05:26 PM Bug #4212: Report Designer - Clicking the delete button removes unselected items
Fixed all remaining issues with this bug. debi staggs
05:20 PM Bug #4190: Report Designer - Create View classes for the Items
Closing this bug, ended up creating view class only for the Dynamic Report Item.
Creating views for the static items ...
debi staggs

07/01/2009

04:37 PM Bug #4217 (Resolved): Report Viewer - "nil" not rendering consistently/correctly
When outputting arrays of numbers and booleans that contain "nil" entries in R, they are not converted to NULL for us... ben leinfelder
04:35 PM Bug #4197: Waterflow TPC demo - tracking bug
tpc02-water-flow-high.xml:
-using record-based data table rendering
-including status actor
-"nil" values are showing...
ben leinfelder
03:43 PM Bug #4197: Waterflow TPC demo - tracking bug
-hsqldb 1.8 looks good.
-removed the browser call
-added naive "status" example - needs to be meaningful
Jim will do ...
ben leinfelder
12:53 PM Bug #4197: Waterflow TPC demo - tracking bug
I'm not seeing the memory errors today when using Eclipse with the currently checked in hsql, nor in Eclipse with hsq... Derik Barseghian
09:31 AM Bug #4197: Waterflow TPC demo - tracking bug
The EML actors throw those exceptions - that is expected.
As for the newer HSQLDB - I will take a look.
ben leinfelder
06:35 PM Bug #4197: Waterflow TPC demo - tracking bug
On my Eclipse build, which is using hsqldb 1.8, I get the same, and some additional errors. Provenance gives an "ERRO... Derik Barseghian
06:24 PM Bug #4197: Waterflow TPC demo - tracking bug
I'm getting a lot of error messages on the console when I open this workflow. It seems to run ok though. (This is whi... Derik Barseghian
04:05 PM Bug #4159: Cut 2.0-alpha/SanParks release
created branch
http://code.kepler-project.org/code/kepler/branches/release-2.0.0-pre-alpha1-branch/ for the release.
Chad Berkley
03:19 PM Bug #4215: Error when check out provenance with change-to
Fixed, modules.txt was in the wrong directory. Daniel Crawl
07:54 AM Bug #4215 (Resolved): Error when check out provenance with change-to
When I tried to check out the provenance suite this week I got the error:
[change-to] Error: The name you specified ...
Chris Weed
02:11 PM Bug #4216 (New): Problems with the File to Array converter
When attempting to run the "File to Array converter" actor as part of a workflow which creates a text file from the o... Colin Campbell
01:22 PM Bug #4164: Associated Data - wf_exec_id behavior
I checked in hsqldb 1.8 in r19734 and that seems to fix this problem. Closing. Derik Barseghian
06:40 PM Bug #4164: Associated Data - wf_exec_id behavior
I'd like to move to 1.8 if possible since this bug is going to be pretty bad for users, they'd seemingly have to clea... Derik Barseghian
11:02 AM Bug #4212: Report Designer - Clicking the delete button removes unselected items
forgot to click the fixed button Chad Berkley
10:34 AM Bug #4212: Report Designer - Clicking the delete button removes unselected items
fixed. if nothing is selected, nothing will be deleted. Chad Berkley

06/30/2009

04:44 PM Bug #4212: Report Designer - Clicking the delete button removes unselected items
If nothing is selected, don't delete anything. ben leinfelder
02:59 PM Bug #4212 (Resolved): Report Designer - Clicking the delete button removes unselected items
If nothing is selected on the canvas and I click the delete button, it seems to remove a randomly chosen component. ... Chad Berkley
04:42 PM Bug #4188: Report Designer - Issues with text fields
chad and I do not see this happening anymore ben leinfelder
04:12 PM Bug #4188: Report Designer - Issues with text fields
I think this is fixed now, and we can close this bug, after Ben tests it. debi staggs
10:59 AM Bug #4188: Report Designer - Issues with text fields
just dragging a new text component onto the canvas deletes the text in most of the other text components (but not all... Chad Berkley
10:58 AM Bug #4188: Report Designer - Issues with text fields
*** Bug 4205 has been marked as a duplicate of this bug. *** Chad Berkley
04:40 PM Bug #4209: Report Designer - Text randomly disappears when dragging new components
not seeing this after latest update ben leinfelder
11:04 AM Bug #4209 (Resolved): Report Designer - Text randomly disappears when dragging new components
If you have some text components on the canvas with text in them, then you drag a new component onto the canvas, some... Chad Berkley
04:40 PM Bug #4210: Report Designer - scrollbar goes off the screen
switched to BorderLayout for the tab ben leinfelder
11:07 AM Bug #4210 (Resolved): Report Designer - scrollbar goes off the screen
The scrollbar on the right goes off of the screen so that I can't see the bottom of it. Chad Berkley
04:07 PM Bug #4197: Waterflow TPC demo - tracking bug
-column headers are capitalized.
-header rows are shaded
-overflowing cell contents are truncated
TODO: remove browse...
ben leinfelder
07:48 AM Bug #4197: Waterflow TPC demo - tracking bug
In the tpc02-water-flow-base.xml workflow I have the table rendering in reporting not using the R data2html method no... ben leinfelder
04:04 PM Bug #4206: Report Designer - layout in left pane is scrunched up
moved the split pane bar down so that the panel doesn't get crunched. Chad Berkley
10:54 AM Bug #4206: Report Designer - layout in left pane is scrunched up
attaching screenshot of scrunched layout Chad Berkley
10:53 AM Bug #4206 (Resolved): Report Designer - layout in left pane is scrunched up
The panel on the left from which you drag components is too small initially. You have to drag to make it larger. It... Chad Berkley
03:37 PM Bug #4213: Report Designer - north and south labels swap
this appears to be fixed now - north and south are maintained ben leinfelder
03:07 PM Bug #4213: Report Designer - north and south labels swap
The ROML is being serialized to XML corrected (i.e. the label entered for "north" is stored in that label) so it's ju... ben leinfelder
03:02 PM Bug #4213 (Resolved): Report Designer - north and south labels swap
Typically happening with another item is dropped on the layout.
The swap seems to only happen once.
ben leinfelder
03:05 PM Bug #4214 (Resolved): Report Designer - Dragging workflow components near report fields adds text to the fields
If you drag an actor or ports of an actor to the canvas and accidentally drop them into a text field, text from the m... Chad Berkley
02:08 PM Bug #4102: Add the ability to insert a static image into the report.
For this release, this bug can be closed. debi staggs
02:06 PM Bug #4195: Report Designer - 'Location aware' rendering of newly dropped panels.
*** Bug 4208 has been marked as a duplicate of this bug. *** debi staggs
02:06 PM Bug #4208: Report Designer - dragging from the component window to the canvas does not drop where you want it
There is already a bug entered for this, so this is a duplicate of bug # 4195
*** This bug has been marked as a dupl...
debi staggs
11:01 AM Bug #4208 (Resolved): Report Designer - dragging from the component window to the canvas does not drop where you want it
If you drag a component from the components pane onto the canvas between two components, the new component shows up a... Chad Berkley
11:20 AM Bug #4211 (Resolved): Report Designer - do not allow dropping of actors on report
We should only allow "leaves" (ports/parameters) that have no children to be reported on. ben leinfelder
11:18 AM Bug #4103: Add the capability of creating SECTIONS in the report.
we have "section" headers now ben leinfelder
10:58 AM Bug #4205: Report Designer - dragging component makes text disappear
duplicate
*** This bug has been marked as a duplicate of bug 4188 ***
Chad Berkley
10:51 AM Bug #4205 (Resolved): Report Designer - dragging component makes text disappear
When you drag a component around the canvas, the text in the text boxes disappears. It should remain in the dragged ... Chad Berkley
10:56 AM Bug #4176: Report Designer - opening KAR omits title
found the place where the title was being set to blank - fixed it ben leinfelder
10:56 AM Bug #4207 (Resolved): Report Designer - drop area is too small
When dragging components around on the canvas, the drop area is too small so it's hard to get components to go where ... Chad Berkley
10:50 AM Bug #4204 (Resolved): Report Designer - finding drag area on components is hard
It's too hard to find where to click on a report item to drag it around on the canvas. You have to move the mouse ju... Chad Berkley
10:17 AM Bug #4203 (In Progress): use port parameters in web service actors
It would be nice if the inputs to WebService and WSWithComplexTypes were port parameters instead of ports. Daniel Crawl
09:25 AM Bug #4200: wrp suite - blank workflow says you've made changes upon exit
committed this change to provenance ben leinfelder
09:23 AM Bug #4200: wrp suite - blank workflow says you've made changes upon exit
In org.kepler.provenance.gui.ProvenanceConfigureAction.addProvenanceRecorder() there was a call to effigy.setModified... ben leinfelder
08:21 AM Bug #4200: wrp suite - blank workflow says you've made changes upon exit
That sounds like the problem. There should be some way to insert those properties only upon model modification inste... Chad Berkley
07:54 AM Bug #4200: wrp suite - blank workflow says you've made changes upon exit
Reporting an Provenance both inject top level attributes in the model if they do not exist: a ProvenanceRecorder for ... ben leinfelder
05:54 PM Bug #4201: Cannot set column widths on the Workflow Report Tab
fixed in r19633.
Feel free to tweak the widths.
I had problems when trying to leave auto resize on and set all setP...
Derik Barseghian
05:12 PM Bug #4201: Cannot set column widths on the Workflow Report Tab
You can get the WRM column widths to take effect if you first
wrmjTable.setAutoResizeMode(JTable.AUTO_RESIZE_OFF);
H...
Derik Barseghian

06/29/2009

04:47 PM Bug #4202 (Resolved): typos in modules.txt are ignored
A line in modules.txt with bad a module/suite name is silently ignored.
An error message should be printed and ant ...
Daniel Crawl
04:37 PM Bug #4201 (Resolved): Cannot set column widths on the Workflow Report Tab
I'm trying to set the widths on the columns for the workflow report pane. The columns refuse to change their widths.... Chad Berkley
04:34 PM Bug #4164: Associated Data - wf_exec_id behavior
If you're sure that updating isn't going to break anything, go for it. If there is any doubt, don't do it. Chad Berkley
04:32 PM Bug #4164: Associated Data - wf_exec_id behavior
I was seeing this bug again today on linux and mac. Upgrading to hsqldb 1.8 *seems* to solve the bug -- I've been una... Derik Barseghian
04:32 PM Bug #4200 (Resolved): wrp suite - blank workflow says you've made changes upon exit
If you open kepler under the WRP suite, then just quit it immediately, it asks you twice if you'd like to save your c... Chad Berkley
04:31 PM Bug #4199 (Resolved): NPE in org.kepler.moml.NamedObjId
I get the following exception:
java.lang.NullPointerException
at org.kepler.moml.NamedObjId.changeExecuted(Named...
Daniel Crawl
01:44 PM Bug #4198 (Resolved): important sanparks tasks
The following is the minimum functionality required for the code freeze tomorrow.
Client functionality
----------...
Chad Berkley
01:37 PM Bug #4193: ActorMetadata - clone() error when opening workflow from KAR
fixed bug in actormetadata cloning where an exception wasn't getting handled. Chad Berkley
01:05 PM Bug #4193: ActorMetadata - clone() error when opening workflow from KAR
Chad fixed the clone bug. I tested it and it worked under GUI mode. Under
the command line mode, the kar file can ...
Jing Tao
01:06 PM Bug #4197: Waterflow TPC demo - tracking bug
Opening from the exported KAR is causing some problems - that's in another bug.
There are two files for this TPC (in ...
ben leinfelder
01:01 PM Bug #4197 (Resolved): Waterflow TPC demo - tracking bug
Will be using this as a demonstration of the TPC reporting system. Logging development here (might overlap with the t... ben leinfelder
12:59 PM Bug #3992: Report Designer - finalize Report item properties
closing - will add properties as needed ben leinfelder
12:47 PM Bug #3992: Report Designer - finalize Report item properties
i'm going to postpone adding the "repeat labels for all" option and all of the "which token of multiple tokens did yo... ben leinfelder
11:11 AM Bug #4196 (Resolved): Report Designer - Easier to Grab Panels
Need to make it a little easier to grab the report item panels. Because of the border layout in the panels, and the ... debi staggs
11:05 AM Bug #4195 (Resolved): Report Designer - 'Location aware' rendering of newly dropped panels.
Right now, when a user drops a report item onto a report, the report designer simply places the panel at the end (bot... debi staggs
08:59 AM Bug #4102: Add the ability to insert a static image into the report.
this seems to be in the model when i render it - is it "done"? ben leinfelder
08:53 AM Bug #4188: Report Designer - Issues with text fields
retarget to 2a1 release ben leinfelder
08:53 AM Bug #3638: Report design features, Stage 2
this appears to be working now ben leinfelder
08:52 AM Bug #4103: Add the capability of creating SECTIONS in the report.
now rendering this in the report instance ben leinfelder
07:43 AM Bug #4186: Metacat assumes (revision > 1) means "update" not "insert"
committed to svn ben leinfelder

06/27/2009

09:55 AM Bug #4194 (Resolved): Kepler should have the Continous and Modal domains
In Ptolemy II 8.0, we are upgrading the ct domain to the continuous domain
and the fsm domain to the modal domain.
...
Christopher Brooks

06/26/2009

04:51 PM Bug #4192: WRM - do not prompt for KAR file when uploading to repository
Fixed. it now gets the file from CacheManager.getTempFile(). Chad Berkley
04:04 PM Bug #4192 (Resolved): WRM - do not prompt for KAR file when uploading to repository
When you select a run in the workflow run manager, right click, select "Upload" you are prompted to specify a save lo... ben leinfelder
04:51 PM Bug #4193 (Resolved): ActorMetadata - clone() error when opening workflow from KAR
Error:
....blah blah blah....
Caused by: ptolemy.kernel.util.IllegalActionException: Could not find a port named 'o...
ben leinfelder
04:46 PM Bug #4186: Metacat assumes (revision > 1) means "update" not "insert"
i have this working locally - will check into seek (svn) next ben leinfelder
02:48 PM Bug #4186: Metacat assumes (revision > 1) means "update" not "insert"
This is actually in ecogrid. I can see where the check is in the ecogrid implementation.
My plan: check if the id exi...
ben leinfelder
11:48 AM Bug #4186 (Resolved): Metacat assumes (revision > 1) means "update" not "insert"
When trying to upload workflows from Kepler we often (almost ALWAYS) have generated LSIDs that have revision > 1.
Fo...
ben leinfelder
04:33 PM Bug #4191: Eclipse build is slow the first time "Copying resources to the output folder"
The first time Eclipse is used to build Kepler, the build hangs
for several minutes.
I had one user who thought that...
Christopher Brooks
03:57 PM Bug #4191 (Resolved): Eclipse build is slow the first time "Copying resources to the output folder"
I just verified that under Windows, the Eclipse build has errors because
of apple-extension.
David Welker wro...
Christopher Brooks
04:11 PM Bug #2493: actor repository tracking bug
The stuff needed for sanparks is done. pushing to 2.0 release. Chad Berkley
10:35 AM Bug #2493: actor repository tracking bug
in response to comment #9, I fixed the issues with the LSID conflicts on upload (using the uploadToRepository method)... Chad Berkley
02:57 PM Bug #4189: Report Designer - Dynamic Report Item labels are not rendering correctly
I think we can close this bug. debi staggs
02:55 PM Bug #4189: Report Designer - Dynamic Report Item labels are not rendering correctly
This bug has been fixed, the dynamic report item panels are now rendering correctly, and should be correct in the mod... debi staggs
12:22 PM Bug #4189 (Closed): Report Designer - Dynamic Report Item labels are not rendering correctly
After the labels are filled in, and then re-ordered, the dynamic report item panels are not rendering the labels corr... debi staggs
02:55 PM Bug #3942: Report Designer - add/edit item labels
This bug has been fixed, and is now working. debi staggs
12:11 PM Bug #3942: Report Designer - add/edit item labels
We can add the labels, but there is a bug with the labels and the model not being in sync. debi staggs
12:07 PM Bug #3942: Report Designer - add/edit item labels
A custom panel for a dynamic report item has been created that provides text fields in the North, South, West, and Ea... debi staggs
12:29 PM Bug #4190 (Resolved): Report Designer - Create View classes for the Items
Create a 'view' class for each of the dynamic and static item subclasses.
This might help to make it easier to synch...
debi staggs
12:20 PM Bug #4188 (Resolved): Report Designer - Issues with text fields
After a few drag and drop operations the text in the section header panels and the text in the static text panels get... debi staggs
12:17 PM Bug #4103: Add the capability of creating SECTIONS in the report.
We can add sections to the report, and the text is larger and bold for the section headers. debi staggs
12:16 PM Bug #4187 (Resolved): When running with reporting suite, a blank canvas is considered changed and unsaved
When running with the following modules.txt:
wrp
workflow-run-manager
*reporting
if you close a new canvas, i...
Sean Riddle
12:16 PM Bug #4102: Add the ability to insert a static image into the report.
We can insert the static image into a report, get a thumbnail image from the file system, and get the path to that im... debi staggs
12:12 PM Bug #3993: Report Designer - add parameters to the Items of Interest
This bug can be closed, because we changed from adding parameters directly, to allowing the user to add them from the... debi staggs
12:09 PM Bug #3992: Report Designer - finalize Report item properties
I believe that we have finalized the item properties, but not sure if the 'repeat once, 'repeat all' properties are w... debi staggs
11:59 AM Bug #3635: Create ReportItem Type Hierarchy
I am closing this bug, since this was created quite some time ago, although it did not look like the original hierarc... debi staggs
10:53 AM Bug #4185: TabManager acting strangely
WorkflowRunManagerPanel was falsely assuming that calling topLevel() on a model would return a CompositeActor. Inste... Chad Berkley
10:37 AM Bug #4185: TabManager acting strangely
This seems to only happen for WRP. Maybe because there are way more tabs and frames in the WRP interface. I'm seein... Chad Berkley
10:27 AM Bug #4185 (Resolved): TabManager acting strangely
The TabManager is calling intializeTabs() twice. Once at startup and once at shutdown. Each time, the parent arg is... Chad Berkley
10:29 AM Bug #4148: Workflow Run Manager - Upload to Repository feature
okay - i'm happy with this feature closing ben leinfelder
10:22 AM Bug #4148: Workflow Run Manager - Upload to Repository feature
now checking for existing workflows - will not attempt to upload again if it already exists ben leinfelder

06/25/2009

04:46 PM Bug #2493: actor repository tracking bug
We're now using the "repository" for many different things:
-actors
-workflows
-workflow runs
-kars (which might cont...
ben leinfelder
04:43 PM Bug #4169: Build "server-side" installation of Kepler
This now works. The KeplerConfigurationApplication (a non-gui implementation of kepler that also loads a full config... Chad Berkley
04:40 PM Bug #4020: WRP - create WorkflowRun object to encapsulate provenance/report instances
We've got this working as we need it for SANParks ben leinfelder
03:57 PM Bug #4020: WRP - create WorkflowRun object to encapsulate provenance/report instances
using this:
<property name="ReportInstance0"
class="ptolemy.kernel.util.StringAttribute" value="RIO.5.pdf">
might b...
ben leinfelder
04:05 PM Bug #4148: Workflow Run Manager - Upload to Repository feature
I want to add more specific error handling around each of the put() calls so that we know exactly what is happening. ... ben leinfelder
04:03 PM Bug #4148: Workflow Run Manager - Upload to Repository feature
We are allowing for a "-repository" parameter as well. It will let us specify which of the configured Repositories we... ben leinfelder
01:16 PM Bug #4148: Workflow Run Manager - Upload to Repository feature
"-server" is now a commandline option that will set a Configuration attribute. ReportingListener will check this and ... ben leinfelder
04:02 PM Bug #4163: erroneous hsql database creation
I don't see the extra folder anymore, looks good Aaron Aaron
03:59 PM Bug #4163: erroneous hsql database creation
we're now using the cache's hsqldb instance and not doing anything to make a separate provenance database.
i'm closin...
ben leinfelder
04:01 PM Bug #3992: Report Designer - finalize Report item properties
i'm thinking "HIDE" will be a good one too, especially if we want to hide the TPC Status item that we'll be putting o... ben leinfelder
03:47 PM Bug #4176: Report Designer - opening KAR omits title
Just verified that this is still a bug.
My test includes a kar file with a report layout that has a title and two ite...
ben leinfelder
03:42 PM Bug #4001: WRP - Save/Open KARs containing MOMLs and ROMLs
we can do this from within the GUI.
we can do this on the command-line (thanks chad!)
ben leinfelder
03:38 PM Bug #4000: WRP - upload PRAs to repository
we've now done a preliminary upload to indus - this looks good. will refine, but closing this ben leinfelder
02:14 PM Bug #4184: EML 2 Dataset disregarding selectedEntity from XML
was "resetting" too many things in the actor when the recordID was updated (after changing latest version).
now only ...
ben leinfelder
01:19 PM Bug #4149: Workflow Run Manager - Export Runs feature
marking as fixed - for sanparks.
As we extend this feature for REAP, we can add a new bug.
ben leinfelder
 

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