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From 10/25/2009 to 11/23/2009

11/24/2009

05:56 PM Bug #4574: Able to delete workflow tags when on a run
That's an artifact of the way I update the tag display now. I'm looking into it. Sean Riddle
05:28 PM Bug #4574: Able to delete workflow tags when on a run
If I relaunch Kepler, past run workflow tags are static (no X to click for delete). Which is good.
However, once I'v...
Derik Barseghian
04:11 PM Bug #4574 (Resolved): Able to delete workflow tags when on a run
I'm able to delete a workflow tag when I shouldn't be to, that is after that workflow has been run. This used to work... Derik Barseghian
04:50 PM Bug #3649: determine if Provenance has everything needed by Reporting
The provenance recorder is currently capturing all the data needed by reporting. Additional requirements can go in ne... Daniel Crawl

11/23/2009

03:58 PM Bug #4443: gui-free class for provenance store settings
The provenance recorder constructors use the connection parameters in the configuration file, and none of the constru... Daniel Crawl
03:38 PM Bug #4037: WRM - connect to Kepler-wide configurable provenance store
This is implemented: the config file specifies the default connection parameters for the provenance store. Daniel Crawl
10:15 AM Bug #4567: NPE viewing LSID of non-workflow entries in local repositories
Skipping the full LSIDViewer UI when we are looking at a non-NamedObj ben leinfelder
10:08 AM Bug #4572: ROML lost when reported ports are in composite actors
I was deleting the layout when the frame was closed (and the frame for the composite shared that same model). Now che... ben leinfelder
09:01 AM Bug #4571: report "lost" from KAR
I actually get the report showing in the first KAR whenever I open it.
I notice that the second KAR does not show the...
ben leinfelder
08:44 AM Bug #4569: viewing report before executing sometimes generates persistent blank report
I'm still not able to recreate this bug. ben leinfelder
07:49 PM Bug #4562: report seems to exist in MOML workflows when kar of same name exists in a local repository
Very good point. The intent was to support 1:n layouts - but that requirement got has been pushed to a later phase.
...
ben leinfelder

11/22/2009

12:57 PM Bug #4572 (Resolved): ROML lost when reported ports are in composite actors
Starting from a clean-cache:
1. Create a KAR containing a composite actor and a report:
a. SDF (iterations = 1...
Oliver Soong
12:09 PM Bug #4571 (Resolved): report "lost" from KAR
In the process of tracking down another bug, I came across some odd behavior. I'm not sure what the exact trigger is... Oliver Soong
11:41 AM Bug #4569: viewing report before executing sometimes generates persistent blank report
It's the File->Save Archive (KAR) that triggers this. After the save, when the archive has been reloaded, changing t... Oliver Soong
11:37 AM Bug #4562: report seems to exist in MOML workflows when kar of same name exists in a local repository
So what happens if I want to have 2 reports for the same workflow? If I want to generate a new report for a workflow... Oliver Soong

11/21/2009

09:17 AM Bug #4409: View Documentation for an actor works once
Still happening for me in WRP suite...retargeting to 2.0 - it seems like a bad idea to release with a bug happening f... ben leinfelder
09:12 AM Bug #4562: report seems to exist in MOML workflows when kar of same name exists in a local repository
While I can see this as odd-looking, I think it ultimately makes sense. KARs in this context are just packaging and c... ben leinfelder
09:03 AM Bug #4569: viewing report before executing sometimes generates persistent blank report
1) opened the tpc01 kar with a clean-cache
2) look at the Report Design view
3) not all items are viewable (scrolling...
ben leinfelder
05:14 PM Bug #4569 (Resolved): viewing report before executing sometimes generates persistent blank report
I unfortunately can't figure out how to replicate this yet. It occurred with the latest tpc01 report archive, althou... Oliver Soong
05:23 PM Bug #4570 (Resolved): dangling file handle for KARs
I'm not a 100% certain this is the cause, but on Windows, if I open a KAR file then close it, Kepler doesn't seem to ... Oliver Soong
04:44 PM Bug #4568 (Resolved): must have some way to view full path to port in report
Bug 4471 got rid of the report TOC. Somewhere along the line, tooltips for the report items disappeared. I now have... Oliver Soong

11/20/2009

02:56 PM Bug #4566: Workflow Run Manager - highlighting sometimes doesn't work for multiple rows
Fixed in r21805. This was a sorting issue. Also added double-click to open, and improved the way right clicks work. Derik Barseghian
01:01 PM Bug #4566 (Resolved): Workflow Run Manager - highlighting sometimes doesn't work for multiple rows
Sometimes when you select multiple rows in the WRM and then right click to get the context menu popup, WRM changes to... Derik Barseghian
02:37 PM Bug #4554: Make layout panel scroll to where the user dropped the last report item.
The designer panel now scrolls down (or up) to where you dropped the last item if there are more than a few items in ... debi staggs
01:17 PM Bug #4567 (Resolved): NPE viewing LSID of non-workflow entries in local repositories
If I have a local repository with KAR files in it and I attempt to "View LSID" on any entry that is not a MOML, I get... Oliver Soong
01:15 PM Bug #4559: local repositories not showing up in components tree
I think this bug is partly due to bug 4512, partly due to the new hiding empty repositories "feature", partly due to ... Oliver Soong
12:31 PM Bug #4559: local repositories not showing up in components tree
I'll see if I can make this happen with a simpler case. There have been unusual errors with this workflow in the pas... Oliver Soong
12:24 PM Bug #4559: local repositories not showing up in components tree
Oliver can you send me the kar you're having the problem with, I am having trouble reproducing this... Aaron Aaron
12:04 PM Bug #4507: report designer losing content when there are too many items
It would be nice to make this more flexible, but it isn't absolutely necessary at this time. However, it would be goo... debi staggs
11:40 AM Bug #4507: report designer losing content when there are too many items
I'm not currently planning on exceeding 95 items, so there's less urgency for a more involved fix. On the other hand... Oliver Soong
11:36 AM Bug #4507: report designer losing content when there are too many items
Does everyone think that this is acceptable at 95 items, or so, or should I consider creating a 'buffer' that would c... debi staggs
08:12 PM Bug #4507: report designer losing content when there are too many items
I see the problem as described at r21780, but at r21788, the number of actors is pushed up to around 95 or so. The p... Oliver Soong
06:45 PM Bug #4507: report designer losing content when there are too many items
I'm at r21647 for report\src\org\kepler\reporting\gui\ReportDesignerPanel.java. I saw you just committed 2 updates, ... Oliver Soong
06:27 PM Bug #4507: report designer losing content when there are too many items
I have a feeling that you might not have the latest revision of the ReportDesignerPanel class, can you try updating o... debi staggs
05:41 PM Bug #4507: report designer losing content when there are too many items
Beyond 5 items, I can no longer add to the bottom of the report designer. There doesn't seem to be any space, and an... Oliver Soong
05:13 PM Bug #4507: report designer losing content when there are too many items
I've been able to get this to happen on my mac (10.5.8) -- at least the part
about having more items on the report de...
Derik Barseghian
05:06 PM Bug #4507: report designer losing content when there are too many items
Will test it out on a different machine to see what happens. debi staggs
04:36 PM Bug #4507: report designer losing content when there are too many items
I just tried r21780 on OS X here in the vis lab and lost ROML content at 10 items. Something isn't matching here... Oliver Soong
08:08 PM Bug #4564: Model Reference throws error with workflows in the same folder, but still functions
What boggles my mind is the tpc09-plant-dynamics-woody.xml workflow uses a VisualModelReference actor that generally ... Oliver Soong
07:34 PM Bug #4564: Model Reference throws error with workflows in the same folder, but still functions
I take back that bit about ../tmp/referred.xml working. I think I just got confused. An error seems to be thrown fo... Oliver Soong
07:11 PM Bug #4564 (New): Model Reference throws error with workflows in the same folder, but still functions
If I have a referring model (referring.xml) and a referred model (referred.xml) in the same folder, I have difficulty... Oliver Soong
07:55 PM Bug #4565: clean wrp checkout has no actors
Missed a clean-cache step from the previous checkout. Oliver Soong
07:15 PM Bug #4565 (Resolved): clean wrp checkout has no actors
I just did a clean checkout, and the Components, Projects, and Statistics branches are completely missing. The Actor... Oliver Soong
05:45 PM Bug #4563: components search seems to be broken
If you follow the instructions in comment 5 for bug 4559, you'll get a Kepler instance with the report archive and ru... Oliver Soong
05:37 PM Bug #4563: components search seems to be broken
Hm, something got buggered somewhere along the way, but I'm not sure exactly what. A clean-cache fixed it, but now I... Oliver Soong
05:30 PM Bug #4563: components search seems to be broken
It's working for me at r21785. There's still the issue with non-workflow items within kars not showing up, but I'm se... Derik Barseghian
05:19 PM Bug #4563 (Resolved): components search seems to be broken
It no longer seems to return anything. Oliver Soong

11/19/2009

03:59 PM Bug #4559: local repositories not showing up in components tree
This is slightly more complicated. I restarted Kepler again, and now both KARs show up in the components tree.
So s...
Oliver Soong
03:47 PM Bug #4559: local repositories not showing up in components tree
I deleted the run archive from the repository and restarted Kepler, but the report archive (MOML and ROML only) still... Oliver Soong
03:44 PM Bug #4559: local repositories not showing up in components tree
yeah, definitely still a little buggy, "ant clean-cache" will fix things if they get out of sync... I'll keep workin... Aaron Aaron
03:40 PM Bug #4559: local repositories not showing up in components tree
Well, I'm now seeing the described behavior at r21780, but I'm missing a KAR. I've got one that's just the MOML and ... Oliver Soong
03:23 PM Bug #4559: local repositories not showing up in components tree
Yeah this is an interesting artifact of the new way the Component Library is built. I'm not sure if this is a bug or... Aaron Aaron
02:25 PM Bug #4559 (Resolved): local repositories not showing up in components tree
Summary says it all. I'm at r21772, and the default workflows repository isn't in the components tree. Adding repos... Oliver Soong
03:32 PM Bug #4507: report designer losing content when there are too many items
I just tested it with 26 items on OSX, and it seems to be working correctly. debi staggs
03:28 PM Bug #4507: report designer losing content when there are too many items
I just tested it with 26 items in the report designer and there were no problems on OSX. debi staggs
03:28 PM Bug #4507: report designer losing content when there are too many items
I just put 26 items in the report designer and there were no issues on OSX. debi staggs
02:52 PM Bug #4507: report designer losing content when there are too many items
This doesn't quite seem to be fully fixed. I'm no longer losing report items from the test case, but add 15 items to... Oliver Soong
03:09 PM Bug #4562: report seems to exist in MOML workflows when kar of same name exists in a local repository
Yeah - so right now the KARs in the local repository are being cached - including the report.
The report is associate...
ben leinfelder
02:49 PM Bug #4562 (Resolved): report seems to exist in MOML workflows when kar of same name exists in a local repository
Create a workflow, save it with some basename (e.g., test.xml), then create a report and save it with the same basena... Oliver Soong
02:35 PM Bug #4561 (New): icon overlays not showing up for actors in the components tree
RExpression used to have the little R icon show up in the components tree (it was an easy way to find the RExpression... Oliver Soong
02:27 PM Bug #4560 (Resolved): can't remove local repositories
This may be related to bug 4559, but attempting to remove local repositories from the components sources list gives a... Oliver Soong
11:47 AM Bug #4555: error exporting etc >1 run with same name but different wf
Ok, fixed in r21769 by adding a little check in KARBuilder right before createKAR that removes karEntry "duplicates",... Derik Barseghian
08:15 AM Bug #4555: error exporting etc >1 run with same name but different wf
put a change in yesterday that will prevent a "blank" ROML from being serialized. But I can definitey imagine a case... ben leinfelder
06:37 PM Bug #4555: error exporting etc >1 run with same name but different wf
I fixed the workflow duplicate entry error in r21693, but you can still get a ROML duplicate entry error:
Failed to ...
Derik Barseghian
04:08 PM Bug #4524: no prompt to save a changed report
retarget/assign ben leinfelder

11/18/2009

02:25 PM Bug #4525: saved KAR and memory report can be out of sync
we are now getting rid of the report layout when the frame is closed - only the version that is in the kar will be used. ben leinfelder
02:08 PM Bug #4514: Files are being saved in the Kepler installation directory
I just sent a related email to kepler-dev, "proposed changes to .kepler".
After discussion w/ Chad and Aaron it soun...
Derik Barseghian
11:48 AM Bug #4457: Workflow Run Manager - past Report Layouts don't open
Turn out this was a problem with multiple report layouts being exported to the KAR: the one "in memory" was blank and... ben leinfelder
10:47 AM Bug #4197: Waterflow TPC demo - tracking bug
The water flow workflow is also looking successful from the command line ben leinfelder
10:28 AM Bug #4197: Waterflow TPC demo - tracking bug
The bovine TB TPC is also a good candidate for "testing" these features out. Just ran the KAR for that from the comma... ben leinfelder
10:07 AM Bug #4161: Develop kepler workflow execution engine
In terms of the credentials - we can now include them in the configuration xml file that is used by the command line ... ben leinfelder
10:05 AM Bug #4546: Save Archive on an actor quits Kepler
commented out the KAR opening that occurred after the save/export/upload ben leinfelder
09:56 AM Bug #4546: Save Archive on an actor quits Kepler
Yep - this is a problem with the ExportArchiveAction eventually trying to "open" the KAR that it exported. ben leinfelder
09:53 AM Bug #4546: Save Archive on an actor quits Kepler
i'm thinking this could have something to do with a previous save archive bug that i was looking at... ben leinfelder
09:12 AM Bug #4410: Cannot open KARs from arbitrary location on disk
only printing a warning message when the KAR is being cached from a non-local repository location. ben leinfelder
08:59 AM Bug #4529: NPE while saving KAR crashes Kepler
The Configuration that was being retrieved ended up being null so the openModel() call failed with the NPE. I used a ... ben leinfelder

11/17/2009

02:44 PM Bug #4336: Merge the old configuration systems
Have now removed the configXML system from kepler and replaced it with the new ConfigurationManager. ConfigurationMa... Chad Berkley
02:03 PM Bug #4410: Cannot open KARs from arbitrary location on disk
I tried this (after the fix) but I'm not able to use the command line to open/run the KAR that is not in the local re... ben leinfelder
12:28 PM Bug #4520: Login Anonymously Fails
Working for me - in all sorts of permutations. Derik is reporting some error messages when the results are parsed, bu... ben leinfelder
11:34 AM Bug #4520: Login Anonymously Fails
I've tried this for both DEV and KNB datasources and both worked fine.
Also tried for the SEEK domain (Tools->Ecogrid...
ben leinfelder
05:12 PM Bug #4555 (Resolved): error exporting etc >1 run with same name but different wf
If you export or open more than one run where the workflow names are the same but the workflows are different, you ge... Derik Barseghian

11/16/2009

03:13 PM Bug #4552: Workflow Run Manager Export Archive no longer adding to Library
fixed in r21544 -- just returning false when trying to add a object to cache that has no CacheObjectInterface. reenab... Derik Barseghian
03:02 PM Bug #4554 (Resolved): Make layout panel scroll to where the user dropped the last report item.
Right now the layout panel scrolls to the top of the report items after each item is dropped. It would be better if ... debi staggs
02:58 PM Bug #4507: report designer losing content when there are too many items
Just needed to dynamically re-size the scrolling pane in the layout panel, and it fixed the problem. debi staggs

11/14/2009

07:37 PM Bug #4552 (Resolved): Workflow Run Manager Export Archive no longer adding to Library
r21538, now setting KARFile members _lsidNames and _lsidTypes, introduced a bug: Export Run from WRM gives an error f... Derik Barseghian
07:27 PM Bug #4541: problem exporting run
Fixed, I believe in r21514. Derik Barseghian
07:23 PM Bug #4410: Cannot open KARs from arbitrary location on disk
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
07:23 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
07:23 PM Bug #4457: Workflow Run Manager - past Report Layouts don't open
r21539 should fix this, going to leave open for a bit for others to test... Derik Barseghian
04:56 PM Bug #4549 (In Progress): String Replace actor "remembers" previous execution values
1. Build a workflow with an SDF director (set iterations to 1), an RExpression (turn off graphics output), and a Disp... Oliver Soong

11/13/2009

03:11 PM Bug #4548 (Resolved): string tokens with newlines print the escape sequences
This was first noticed when viewing an RExpression's "output" port. The output port emits a string token containing ... Oliver Soong
03:06 PM Bug #4547 (Resolved): documentation for file parameter includes an error
The documentation for the file parameter includes at the top:
Error evaluating DocAttribute parameter: ptolemy.ke...
Oliver Soong
03:04 PM Bug #4545: String To Image Converter seems broken
I misread the documentation. Oliver Soong
02:44 PM Bug #4545 (Resolved): String To Image Converter seems broken
If I pass the an image file as a string ("C:/tmp/image.png") to the String To Image Converter actor, it seems not to ... Oliver Soong
02:46 PM Bug #4546 (Resolved): Save Archive on an actor quits Kepler
If you right click on an actor and select Save Archive, Kepler shows some error dialogs. Once you click through these... Derik Barseghian
02:18 PM Bug #4544 (Resolved): Enter key in Report Designer title invokes a search
I notice if I enter a title in the Report Designer and then hit Enter, I get debug messages on the console from Compo... Derik Barseghian
07:47 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
Unless I missed something, this turned out to not be so bad, and I've got it working locally. I'll check in after mor... Derik Barseghian
05:42 PM Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report
I've gotten option 1 to work locally: when opening (a) run(s) from WRM, just build a temp kar and then open it. This ... Derik Barseghian

11/10/2009

03:37 PM Bug #4467: WRP - restarting/reopening Kepler throws error
I also can get this reliably. Sean Riddle
03:36 PM Bug #4467: WRP - restarting/reopening Kepler throws error
I'm seeing this. The console indicates:
ERROR (org.kepler.reporting.rio.fop.ReportParser:parse:97) could not find ...
Oliver Soong
03:06 PM Bug #4540: authentication problems with dev.nceas.ucsb.edu
it was removed with the configuration system changes. i've now added it in the WRP module using a configuration override ben leinfelder
10:42 AM Bug #4540 (Resolved): authentication problems with dev.nceas.ucsb.edu
If I start Kepler and open a workflow that accesses the dev metacat, I get some error messages and this on the consol... Oliver Soong
02:39 PM Bug #4539: Applying a tag can be slow
Fixed in r21473. Problem was repeated calls to Vector contains() in NamedOntModel.getNamedClasses() which is expensiv... Derik Barseghian
06:48 PM Bug #4539: Applying a tag can be slow
See comment in r21462. Derik Barseghian
06:45 PM Bug #4539 (Resolved): Applying a tag can be slow
I've tracked down (one of?) the reason(s) for applying a tag being slow -- starting at the Workflow Run Manager a cal... Derik Barseghian
12:25 PM Bug #4541 (Resolved): problem exporting run
If in WRP I open and run a workflow, quit and restart Kepler, and then right click on the run and select Export Archi... Derik Barseghian
09:47 AM Bug #4410: Cannot open KARs from arbitrary location on disk
this can also be problematic when we use the "remote execution" version of Kepler because it forces us to either conf... ben leinfelder

11/09/2009

11:52 AM Bug #4538 (Resolved): problems with KARs that contain tags from default ontologies
If you Save KAR a workflow that you've tagged with a tag that comes from an existing ontology (e.g. one of the defaul... Derik Barseghian

11/06/2009

01:33 PM Bug #4518: Workflow Run Manager - no imported run tags
Tags are now serialized into WorkflowRun moml. Run tags are at the top level, workfow tags are in a workflowTags sect... Derik Barseghian
11:44 AM Bug #4512: missing entries with multiple copies of the same KAR file in a single repository
now that i've seen this...it's very confusing indeed!
I think it's absolutely fine to have the "same" (LSID matches) ...
ben leinfelder
09:05 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
this should work now that the LSID is not being changed when the workflow opens in a new namespace (kepler) instance ben leinfelder
08:30 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
also: just opening a plain old XML workflow file from a different InstanceAuthNamespace results in a new LSDI being a... ben leinfelder
08:24 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
The workflow in question has an LSID of:
urn:lsid:gamma.msi.ucsb.edu/OpenAuth/:964:30:97
when I step through opening ...
ben leinfelder
09:05 AM Bug #4224: New LSID generated when opened from KAR
i commented out the new LSID line - hopefully this does not have negative consequences for other parts of the system. ben leinfelder
08:39 AM Bug #4224: New LSID generated when opened from KAR
The LSID is still being changed when we have a new InstanceAuthNamespace. This is causing some problems with reports ... ben leinfelder
04:42 PM Bug #4533: printing from the report viewer prints the workflow editor content
Do we have a solution (even an idea) about how to change the Menu bar based on the current view? I'm thinking that we... ben leinfelder
04:42 PM Bug #4535 (Resolved): exception when initiating the kars of a module whose name include a period.
It can be reproduced by adding a 'globus3.0' in modules.txt. The exception happened when the kepler tries to initiate... jianwu jianwu

11/05/2009

11:21 AM Bug #4534 (Resolved): add extra space before section headers when BREAK_BEFORE is false
This is so incredibly trivial, but I can't lower the priority on this any more than it already is.
Section breaks,...
Oliver Soong
10:59 AM Bug #4532: have to manually click Build to rename repositories
So this only happens if the cell is still in editing mode when you press the OK button. If you hit return or click s... Aaron Aaron
10:34 AM Bug #4532: have to manually click Build to rename repositories
Oh, since I saw the Refresh item in the right-click menu on the components tree, I assumed that would be how to updat... Oliver Soong
10:22 AM Bug #4532: have to manually click Build to rename repositories
Thanks Oliver, I'll get the name changing fixed asap.
The build button was named because it will rebuild the whole l...
Aaron Aaron
09:56 AM Bug #4532 (New): have to manually click Build to rename repositories
If I open the Components Sources dialog and change the name of one of the sources, then click Ok, the changes are not... Oliver Soong
10:51 AM Bug #4409: View Documentation for an actor works once
I should clarify and add a workaround. This seems to occur only when right-clicking in the components tree and viewi... Oliver Soong
10:28 AM Bug #4409: View Documentation for an actor works once
When trying to view documentation the second time, there is some error information on the console:
Error in getting...
Oliver Soong
10:40 AM Bug #4507: report designer losing content when there are too many items
A test case is pretty simple. Put an RExpression on the canvas, then keep dragging the port into the report designer... Oliver Soong
10:16 AM Bug #4533 (In Progress): printing from the report viewer prints the workflow editor content
I didn't entirely expect this to work, but File->Print from the report viewer prints the workflow content, not the re... Oliver Soong
09:14 AM Bug #4359: Model Reference causes String index out of range error in variable setter
I think this actually got fixed sometime back around r21137. Oliver Soong

11/04/2009

11:42 AM Bug #4525: saved KAR and memory report can be out of sync
Upon further investigation, it seems that the ReportLayout (object) is being modified as it resides in the cache. So ... ben leinfelder
09:08 AM Bug #4525: saved KAR and memory report can be out of sync
sounds like we need to "clear out the memory" when we close the window for this workflow/layout.
this should probably...
ben leinfelder
06:39 PM Bug #4525: saved KAR and memory report can be out of sync
And I'm not touching the Refresh (using current layout) button, so that should have nothing to do with it. Oliver Soong
06:38 PM Bug #4525 (Resolved): saved KAR and memory report can be out of sync
Create a simple report sand save it. Now change it, close the report and re-open the KAR (I've been right-clicking i... Oliver Soong
11:36 AM Bug #4510: can't add local repository if its name begins with the name of another local repository
should be ok now Aaron Aaron
09:16 AM Bug #4510: can't add local repository if its name begins with the name of another local repository
it would be good to get this squared away for the wrp "release" ben leinfelder
10:47 AM Bug #4528: BREAK_BEFORE property for report sections does not work
had slightly incorrect xpath in the XSL ben leinfelder
08:41 AM Bug #4528: BREAK_BEFORE property for report sections does not work
this was working at one point. ben leinfelder
10:14 PM Bug #4528 (Resolved): BREAK_BEFORE property for report sections does not work
I'm not sure if this is broken or just hasn't been implemented, but if I create a trivial workflow and create a trivi... Oliver Soong
09:55 AM Bug #4521: KNB data error checking is overly aggressive
Error in my configuration manager conversion code in DelimiterResolver. Fixed. Chad Berkley
05:34 PM Bug #4521: KNB data error checking is overly aggressive
This is a problem with some configuration values. I'll get this fixed tomorrow. Chad Berkley
05:22 PM Bug #4521: KNB data error checking is overly aggressive
I think this is my fault. I'm trying to track it down now. Chad Berkley
05:03 PM Bug #4521 (Resolved): KNB data error checking is overly aggressive
On r21314, I can no longer access the Kruger data. I believe this is due to some overly aggressive error checking on... Oliver Soong
09:19 AM Bug #4512: missing entries with multiple copies of the same KAR file in a single repository
If i'm imagining this correctly, it would be the same as having any other "components" show up multiple times in the ... ben leinfelder
08:59 AM Bug #4529: NPE while saving KAR crashes Kepler
aaron - can you take a look at this since the stack trace looks to be around ActorMetadataKAREntryHandler?
ben leinfelder
10:42 PM Bug #4529: NPE while saving KAR crashes Kepler
I can reproduce this on 21316. I'm not sure which of these steps is absolutely necessary, but this is what I do:
1...
Oliver Soong
10:30 PM Bug #4529: NPE while saving KAR crashes Kepler
Incidentally, I can restart Kepler and open the saved KAR. Oliver Soong
10:19 PM Bug #4529 (Resolved): NPE while saving KAR crashes Kepler
While exploring another bug, I encountered this NPE, and it entirely killed Kepler. This happened after saving a wor... Oliver Soong
08:57 AM Bug #4530: changing a KAR outside of a Kepler session fails without a clean-cache
Because objects are cached (report layouts, workflows, etc) I think it's reasonable to encounter the behavior you see... ben leinfelder
12:25 AM Bug #4530 (Resolved): changing a KAR outside of a Kepler session fails without a clean-cache
If I create a KAR, close Kepler, modify the ROML (unzip, text editor, re-zip), then replace the original KAR and star... Oliver Soong
08:52 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
svn co https://code.ecoinformatics.org/code/kruger/trunk/workflows/tpc01-buffalo-tb
There should be a KAR in there a...
Oliver Soong
08:49 AM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
Transporting the InstanceAuthNamespace is unacceptable.
One of the major reasons for having KARs is for sharing them ...
ben leinfelder
08:01 PM Bug #4527: reports cannot be loaded when InstanceAuthNamespace changes
It looks like a workaround is to transfer the InstanceAuthNamespace file from one computer to the other. It requires... Oliver Soong
07:39 PM Bug #4527 (Resolved): reports cannot be loaded when InstanceAuthNamespace changes
Generate a report and save the KAR. Close Kepler, clean-all, delete the configuration folder, LastObjectID, and .pto... Oliver Soong
12:09 AM Bug #4522: Folder not found in library index
I should add that I've only been able to reliably observe this with a specific Kruger TPC workflow (I haven't really ... Oliver Soong
09:02 PM Bug #4522: Folder not found in library index
I've confirmed that this occurs when you try to save over the archive that is currently opened. Create a KAR archive... Oliver Soong
05:28 PM Bug #4522 (Resolved): Folder not found in library index
I wasn't able to get any assistance with this on IRC, and this has occurred multiple times. I haven't yet been able ... Oliver Soong
07:00 PM Bug #4523: apply button while editing ports acts like commit
Fixed in the Ptolemy head.
I'm not sure what's so difficult about this little bit of code that prevents me
from getti...
Christopher Brooks
06:29 PM Bug #4523: apply button while editing ports acts like commit
Also, for what it's worth, this problem occurs with r21314. However, with r21218, the commit button seems to behave ... Oliver Soong
06:27 PM Bug #4523 (Resolved): apply button while editing ports acts like commit
I think this was triggered by the fix for 4478. The apply button now acts like the commit button, as the ports windo... Oliver Soong
06:59 PM Bug #4526 (Resolved): multi-line entries can be put into text items in reports, but they are displayed on a single line
I'm not sure if this is a bug or an enhancement request. I guess it depends on what the intention was. Are text box... Oliver Soong
06:34 PM Bug #4524 (Resolved): no prompt to save a changed report
If I change the report, don't save, and close the window, I get no prompt to save it. Oliver Soong
04:17 PM Bug #4520: Login Anonymously Fails
Errors from the console:
[run] searching..
[run] ldap authenticating...
[run] creating gui
[run] d...
Chad Berkley
04:16 PM Bug #4520 (Resolved): Login Anonymously Fails
If you do a data search, you are prompted to login. If you click the "Login Anonymously" button, not only does it no... Chad Berkley

11/03/2009

03:46 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
This Ptolemy model has a top level with a const connected to one port of a two port composite. Inside the composite,... Christopher Brooks
03:13 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
I tried disconnected graphs, but it still throws the error.
I realize it's a slightly complicated case, as the sched...
Oliver Soong
03:09 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
Ah, nevermind, I see the test cases. Christopher Brooks
03:08 PM Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected
Need a test case here.
Also, try selecting "Allow disconnected graphs" in the SDF director.
Christopher Brooks
02:41 PM Bug #4519 (New): SDF Director cannot schedule when composite actor input port is disconnected
A workflow with an RExpression actor with unconnected input ports will work (see attached example 1). However, if I ... Oliver Soong
03:33 PM Bug #4507: report designer losing content when there are too many items
This is looking somewhat more serious. It seems like the report is actually losing content when it no longer fits in... Oliver Soong

11/02/2009

01:32 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Number 2 should also work now. Sean Riddle

10/30/2009

04:49 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Tagging all selected rows sounds more desirable to me. It would be common for someone to run a model a bunch of time... Matt Jones
04:17 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
An easy solution for now would be to disable tagging (probably changing the displayed tagging context to something li... Sean Riddle
04:14 PM Bug #4476: Tagging / Workflow Run Manager interaction problems
Looks like Sean has fixed #1.
I've fixed #3.
#2 still a problem.
Derik Barseghian
04:25 PM Bug #4518 (Resolved): Workflow Run Manager - no imported run tags
If you export a run that has tags into a kar, then delete that run from the WRM, then open that kar, the imported run... Derik Barseghian

10/29/2009

03:12 PM Bug #4506: Exception is thrown during workflow execution
If it comes to the use case - yes and no.
It fails during execution of the workflow that combines PN and DDF directo...
Michal Owsiak
01:39 PM Bug #4514: Files are being saved in the Kepler installation directory
There are two options here, keep the configuration directory in the installation directory and save the other files t... Aaron Aaron
12:05 PM Bug #4514 (Resolved): Files are being saved in the Kepler installation directory
There are still files and directories being saved, at runtime, to the Kepler installation directory. These files nee... Chad Berkley
01:33 PM Bug #4324: ptII/module-info/revision.txt not being updated
Working again. I'll monitor this to make sure it keeps working. Chad Berkley
12:46 PM Bug #4324: ptII/module-info/revision.txt not being updated
My cron job has, for some reason, decided not to find ant. I'm working with Nick on figuring this out. Chad Berkley
01:30 PM Bug #4273: Ctrl+E operates on mouse position, not selection
Very minor, moving to post 2.0. Chad Berkley
01:29 PM Bug #4202: typos in modules.txt are ignored
Not critical for users so moving to post 2.0. Chad Berkley
01:27 PM Bug #4430: hsql database name and port in Kepler should be configurable
Not critical for users so moving to post 2.0. Chad Berkley
01:25 PM Bug #4354: Enable the build system to work on multiple SCM systems.
Not critical for users so moving to post 2.0. Chad Berkley
01:25 PM Bug #4339: build system needs to provide more information on modules
Not critical to the user experience in kepler, so moving to post 2.0 Chad Berkley
01:24 PM Bug #4097: here are some new svg icons for actors
Punting on this until after 2.0 since it is not critical. Chad Berkley
01:18 PM Bug #4311: Build system appears to lock if there is a conflict upon update
pushing to post 2.0 since this does not affect the user experience. Chad Berkley
01:15 PM Bug #4153: report-overrides
since this does not affect the user experience, I'm pushing this to post 2.0 Chad Berkley
01:13 PM Bug #4246: Reorganize code in util, core and gui modules
Since this is mostly done and will not effect the user experience of kepler 2.0, i'm pushing this to a post-2.0 miles... Chad Berkley
01:12 PM Bug #3948: Create new configuration system supporting modules
The configuration system is now 99% done with only minor tweaks needed. I am still finding and adding utility method... Chad Berkley
12:18 PM Bug #4517 (Resolved): Verify that the search capabilities work
As per the roadmap, search capability requirements include:
* local search of direstories
* remote search of repo...
Chad Berkley
12:15 PM Bug #4516 (Resolved): Module Manager needs ability to install modules needed by KARs
The roadmap specifies that the module manager should be able to automatically install modules needed by a specific KA... Chad Berkley
12:12 PM Bug #4515 (Resolved): Finish and Document the Save/Open KAR file functionality
We need to finish the save/open functionality as listed in the kepler roadmap. This functionality should also be doc... Chad Berkley
10:43 AM Bug #4513 (Resolved): On the PC the paint transparency for buttons doesn't redraw correctly
Only on the PC, the buttons that have semi-transparent paint end up showing some of the text strings from tables in t... debi staggs

10/28/2009

03:43 PM Bug #4512 (Resolved): missing entries with multiple copies of the same KAR file in a single repository
Things don't seem to work right if I have multiple copies of the same KAR file in a single local repository. I think... Oliver Soong
03:30 PM Bug #4509: Report instance not being serialized with Save Archive
My mistake, the pdf shouldn't be saved with Save Archive since it's specific to an instance. Derik Barseghian
05:58 PM Bug #4509 (Resolved): Report instance not being serialized with Save Archive
In WRP it looks like the report instance (pdf) is no longer being serialized into the KAR when you File => Save Archive. Derik Barseghian
01:54 PM Bug #4511: There are 2 toolbars in the Kepler main window
That is correct. I think the tag entry bar on the main toolbar does not look particularly cluttered, but putting tags... Sean Riddle
01:50 PM Bug #4511: There are 2 toolbars in the Kepler main window
So there's a tags toolbar and the regular toolbar, and the tags menu is on the regular toolbar but the tags themselve... Oliver Soong
01:49 PM Bug #4511: There are 2 toolbars in the Kepler main window
That's where tags go. If you add a tag, the toolbar gets sized appropriately. Sean Riddle
01:46 PM Bug #4511 (Resolved): There are 2 toolbars in the Kepler main window
There are 2 toolbars in the Kepler main window, one of which is empty. I've seen this using wrp on Windows and linux... Oliver Soong
12:24 PM Bug #4510 (Resolved): can't add local repository if its name begins with the name of another local repository
If I've added C:\Documents and Settings\soong\Desktop\kruger as a local repository, I can't add C:\Documents and Sett... Oliver Soong
11:07 AM Bug #4504: Semantic Type Browser
This is no longer happening. Derik Barseghian
05:05 PM Bug #4508: report viewer should listen for executions to finish
added handling for the event being broadcast by reporting ben leinfelder

10/27/2009

04:27 PM Bug #4508 (Resolved): report viewer should listen for executions to finish
After running a workflow in the report viewer, the user must "change" to the report viewer before the report is updat... Oliver Soong
04:25 PM Bug #4507 (Resolved): report designer losing content when there are too many items
If I have a lot of items in the report designer, the scroll bar seems to be too short for the content. Eventually, t... Oliver Soong
02:20 PM Bug #4506: Exception is thrown during workflow execution
Is there a test case? Christopher Brooks
01:46 PM Bug #4506 (Resolved): Exception is thrown during workflow execution
Within PN like workflow it seems that one thread iterates through the hashmap while other one modifies the data of th... Michal Owsiak
01:14 PM Bug #4505 (Resolved): NPE from Semantic Search
On os X or linux w/ the kepler suite, I get an NPE when I try to run a search in the Semantic Search dialog:
...
Derik Barseghian
01:06 PM Bug #4504 (Resolved): Semantic Type Browser
On os X 10.5 w/ the wrp suite I get an error when I select an ontology in the Semantic Type Browser (right click on c... Derik Barseghian
12:33 PM Bug #4503 (Resolved): Suggest Similar Components gives an error
If I right click on an actor on canvas and select Suggest => Similar Components, I get an NPE. This happens in the ke... Derik Barseghian
 

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