Activity
From 02/02/2010 to 03/03/2010
03/03/2010
- 11:54 PM Bug #4082: New user guide section on modules/module manager
- Made a new chapter (12) in the User Manual for modules. It is short and oriented towards users rather than developers...
- 11:47 PM Bug #4071: Rework Section 2
- Will do this documentation update when we get installers created.
- 06:03 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Hey Chad, is the Get Metadata context menu item supposed to be available for all actors? It looks like in 1.0 it was ...
- 05:52 PM Bug #4852: Documentation => Remove Customization doesn't work
- I wonder if this ever worked in Kepler? It doesn't in 1.0. I'm having trouble finding where/how the documentation may...
- 01:24 PM Bug #4852: Documentation => Remove Customization doesn't work
- This is kepler-specific, it works in vergil.
- 05:40 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- fixed also for Directors in r23268 (trunk) and r23269 (2.0)
- 04:29 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- is that a "yes"?
- 04:21 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- actor and director kars have been combined in head, closing this bug.
- 04:14 PM Bug #4858: Open Actor on non-composite actors no longer works
- (In reply to comment #13)
> This happened for me today too, as I was going through testing the examples in
> the Docu... - 03:45 PM Bug #4858: Open Actor on non-composite actors no longer works
- This happened for me today too, as I was going through testing the examples in the Documentation.
- 04:12 PM Bug #4081: Rework Appendix B
- (In reply to comment #5)
> (In reply to comment #4)
> > Originally, I had wanted to keep all of the screen shots cons... - 04:09 PM Bug #4081: Rework Appendix B
- (In reply to comment #4)
> Originally, I had wanted to keep all of the screen shots consistent, however,
> it's going... - 03:42 PM Bug #4081: Rework Appendix B
- Originally, I had wanted to keep all of the screen shots consistent, however, it's going to take a lot of work to do ...
- 03:16 PM Bug #4081: Rework Appendix B
- Reviewed the R appendix - some minor typos corrected, but no glaring omissions re: functionality. I was concerned abo...
- 11:37 AM Bug #4081: Rework Appendix B
- updated links to NCEAS R reference material. Links are as follows (thanks, Rick).
http://www.nceas.ucsb.edu/scicom... - 10:50 AM Bug #4081: Rework Appendix B
- Updated links, proof-read. Need NCEAS links to work. Sent email to shaun and rick asking about missing pdfs.
http:... - 04:06 PM Bug #4077: Rework Section 8
- only a couple minor things.
we do need to be aware of the act that the R examples are located in a the r module, not ... - 11:06 AM Bug #4077: Rework Section 8
- updated all links. reviewed and revised content. asking ben to make sure we're not missing anything with the additi...
- 03:41 PM Bug #4074: Rework Section 5
- Done updating section 5.
- 01:13 PM Bug #4865: Second time running a workflow by command line faild
- Working now for Jing and I, closing.
- 01:08 PM Bug #4865: Second time running a workflow by command line faild
- This was the problem Ben fixed the other day, but began recurring again probably because of my changes in r23263, but...
- 12:28 PM Bug #4865: Second time running a workflow by command line faild
- I ran into this also. I think the LSID is getting put in the cache, then when you try to run the WF from the kar file...
- 12:24 PM Bug #4865 (Resolved): Second time running a workflow by command line faild
- I use the following command to run a workflow:
java -classpath build-area/lib/ant.jar:kepler.jar org.kepler.build.ru... - 01:12 PM Bug #4860: GUI-free class for Workflow Run Export
- Works now for Jing and I at r23265, closing.
- 12:49 PM Bug #3976: Update Documentation for 2.0 release
- Chapter One of the user's guide links and screen shots have been updated. Asking Chad to review section 1.4 Future G...
- 12:22 PM Bug #4864 (Resolved): Update paths in demo workflows
- After RC1 is cut, update all file paths in the demo workflows to use the module-X.0 format.
- 11:16 AM Bug #4076: Rework Section 7
- The documentation is almost done. Several small issued to be discussed with Ilkay.
- 10:36 AM Bug #4078: Rework Section 9
- Updated all links and proof-read. Sent an email to Ilkay asking her to review the content as I don't know enough abo...
- 10:22 AM Bug #4078: Rework Section 9
- I'll take this one.
- 10:21 AM Bug #4079: Rework Section 10
- done.
03/02/2010
- 02:32 PM Bug #4858: Open Actor on non-composite actors no longer works
- I did:
mkdir kepler-2.0
cd kepler-2.0
svn co https://code.kepler-project.org/code/kepler/branches/releases/release-... - 11:22 AM Bug #4858: Open Actor on non-composite actors no longer works
- Christopher,
your fix does not work for me. Is there something else you did? The ptolemy-8.0/src directory is alr... - 10:51 AM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, the .classpath file does include the ptolemy src directory in the classpath. I'm currently looking into why thi...
- 02:30 PM Bug #4851: KarEntryAttributes not saved in MANIFEST.MF/KarXML
- fixed
- 01:31 PM Bug #4845: KAR dependencies not properly supporting module versions
- Seems to be OK now.
- 09:54 AM Bug #4860 (Resolved): GUI-free class for Workflow Run Export
- I'm trying to get the command-line execution working where I run a KAR and it produces a run KAR with the workflow/la...
- 08:26 AM Bug #4859: GDALTranslate does not work on Windows 7 (64bit)
- GDAL probably just needs to be recompiled for this architecture, and the installer adapted to detect which architectu...
- 07:41 AM Bug #4859 (In Progress): GDALTranslate does not work on Windows 7 (64bit)
- GDALJniGlue fails to intialize on Windows 64bit operating systems.
ptolemy.kernel.util.IllegalActionException: i... - 07:31 AM Bug #3205: gdalTranslate actor crashes on bad format and won't work with all gdal formats
- We're having a similar problem on the 2.0.0 trunk. This is a trivial workflow that attempts to convert an ERDAS IMG ...
03/01/2010
- 09:59 PM Bug #4826: intermittent exceptions displaying matrix tokens
- Fixed.
The problem was that actor.gui.MatrixPane has a public variable JTable table.
This variable should only be use... - 02:01 PM Bug #4826: intermittent exceptions displaying matrix tokens
- This bug does not seem to affect functionality, so I'm moving it to 2.x.y
- 06:09 PM Bug #4858: Open Actor on non-composite actors no longer works
- I can reproduce this under Kepler trunk with Eclipse.
The workaround is to add ptolemy/src to the classpath.
How I ... - 05:39 PM Bug #4858: Open Actor on non-composite actors no longer works
- Also happens to me from trunk from within eclipse. Maybe another eclipse user can see if it happens to them too...
- 05:06 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, reopening. So even with the ptolemy revision confusion aside, on a fresh checkout of the branch, this error does...
- 03:08 PM Bug #4858: Open Actor on non-composite actors no longer works
- Thanks guys. I wasn't seeing a bunch of ptolemy updates from within eclipse. I've updated with ant update, and it's w...
- 02:54 PM Bug #4858: Open Actor on non-composite actors no longer works
- Oh, I should also note that I updated the context menu configuration last week to match up with some new ptolemy menu...
- 02:50 PM Bug #4858: Open Actor on non-composite actors no longer works
- I just tried this with the 2.0 branch and it worked for me. Have you tried a fresh checkout, derik? Also, are you u...
- 02:36 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hey Christopher,
Thanks, it works for me on trunk too, I should've tried that and also specified: this is currently a... - 02:34 PM Bug #4858: Open Actor on non-composite actors no longer works
- [Sorry, committed before being done].
I can't reproduce this. I'm running the Kepler devel tree
from the ptII head.... - 02:22 PM Bug #4858: Open Actor on non-composite actors no longer works
- Hmm, this works for me in the Kepler devel tree and the Ptolemy tree.
I'm running from the - 01:44 PM Bug #4858 (Resolved): Open Actor on non-composite actors no longer works
- Drag a Display to canvas, right-click Open Actor and you'll get an Error popup:
Cannot find a tableau or the source ... - 11:57 AM Bug #4857: Search on ecogrid server does not return proper results
- Fixed in r23242. Changed the ecogrid XML query document in a similar way to the way Ben told me to modify the query f...
- 11:50 AM Bug #4857 (Resolved): Search on ecogrid server does not return proper results
- I uploaded a test workflow called count.kar (LSID = 8097.16.1) to the Kepler dev repository. I then searched on term ...
- 11:15 AM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- I've filed a bug and an ER against vergil re: an NPE on Get Documentation on actor ports, and Customize Documentation...
02/27/2010
- 04:28 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- ReportLayoutKAREntryHandler.cache
WorkflowManager.getWorkflows
WorkflowManager.initialize
ObjectManager.getObjectRevi...
02/26/2010
- 08:27 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- fixed for workflows and actors in r23238.
- 05:10 PM Bug #4848: only first change to Customize Documentation shown in Documentation=>Display
- The problem is with calling Show Documentation (which calls GetDocumentationAction) twice.
On the first call to Get... - 07:09 PM Bug #4852 (Resolved): Documentation => Remove Customization doesn't work
- If you Customize Documentation on a workflow or an actor, Remove Customization doesn't remove it.
- 03:26 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- I can see the cache() method will eventually call the ObjectManager. is this the culprit that forces parsing of the m...
- 03:13 PM Bug #4851: KarEntryAttributes not saved in MANIFEST.MF/KarXML
- Yeah, looks like KARBuilder.prepareManifest() only adds certain attributes to the Manifest. Really it should enforce ...
- 03:09 PM Bug #4851 (Resolved): KarEntryAttributes not saved in MANIFEST.MF/KarXML
- I'm trying to add some key metadata entries to the KAREntries I provide in the ReportInstanceKAREntryHandler. I can s...
- 02:29 PM Bug #4828: Uploading a top-level workflow to the repository fails
- Now the DOCTYPE is screened out from fragments prior to constructing the larger KAR XML document.
- 01:31 PM Bug #4828: Uploading a top-level workflow to the repository fails
- targeting for 2.0
- 02:05 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- Also combined directors-2.0 kars into one kar. do a
"rm ~/KeplerData/modules/directors-2.0/kar/*.kar"
and also an ... - 01:46 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- I have combined all the actors in the actors-2.0 module into 1 kar. Recommended to "rm ~/KeplerData/modules/actors-2...
- 11:54 AM Bug #4799: "Login Anonymously" gave an error during the data search
- Refactored the anonymous login configuration to be at the Domain class rather than the Repository class.
-adds config... - 10:53 AM Bug #4799: "Login Anonymously" gave an error during the data search
- Ugh. We still have two different systems for managing our various "remote services":
-Repositories (components)
-Ecog... - 10:38 AM Bug #4799: "Login Anonymously" gave an error during the data search
- I figured it out!
when you try to use the "Login Anonymously" button, the authentication service will try to look of... - 09:16 AM Bug #4849: ant eclipse fails
- Fixed. Forgot to add some new files to the repository.
- 09:10 AM Bug #4849: ant eclipse fails
- I should mention this is on trunk
- 09:10 AM Bug #4849 (Resolved): ant eclipse fails
- [eclipse] java.io.FileNotFoundException: /Users/leinfelder/workspace_kepler/kepler/build-area/resources/eclipse/Ptole...
02/25/2010
- 05:55 PM Bug #4848 (Resolved): only first change to Customize Documentation shown in Documentation=>Display
- If I right-click Documentation=>Customize Documentation on an actor, I can change the documentation, and Documentatio...
- 05:28 PM Bug #4337: 1.0 -> 2.0 upgrade issues tracking bug
- All tasks are closed. Closing this tracking bug.
- 03:27 AM Bug #4337: 1.0 -> 2.0 upgrade issues tracking bug
- Are there any remaining tasks for this bug?
- 05:27 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Fixed in rev 23213.
- 05:10 PM Bug #4847 (Resolved): Instantiating new actor from library gives error after restart
- Steps:
- On 2.0 branch, drag out e.g. an ImageJ actor, and e.g. change its name and customize its documentation
- r... - 03:45 PM Bug #4846: error opening kar from local repository
- I also noticed that, after restarting Kepler, the KAR and local repository *are* listed in the components pane, but t...
- 03:38 PM Bug #4846: error opening kar from local repository
- I just noticed, but I'm getting 2 of these errors every time I save to the local repository:
ERROR (org.kepler.obje... - 02:50 PM Bug #4846 (Resolved): error opening kar from local repository
- This is with wrp at r23202. I deleted .kepler and KeplerData. I create a trivial workflow (default SDF and RExpress...
- 03:17 PM Bug #3976: Update Documentation for 2.0 release
- All of the screenshots and hyperlinks for the getting started guide have been updated.
- 02:37 PM Bug #4845 (Resolved): KAR dependencies not properly supporting module versions
- The KAR dependencies are not being properly matched to module names and versions.
- 01:28 PM Bug #4801: out of memory
- There's another way to trigger a memory leak. I'm not sure if these are 2 different leaks or 2 symptoms of the same ...
- 11:55 AM Bug #4727: Cannot compile Ptolemy from IntelliJ
- I have fixed this so that Intellij's class path is determined in a manner more similar to the build.
- 11:54 AM Bug #4709: error updating ptolemy/src
- I have fixed this so that if ptolemy/src is not present due to a problem with checkout, "ant update" will attempt to ...
- 11:37 AM Bug #4831: Kepler (trunk) couldn't save a workflow to a remote repository as kar file
- I just tried and it works.
- 08:44 AM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- Jing, my test on 2.0 branch works. Thanks.
- 03:11 AM Bug #3027: jar handling issues
- This older bug can be closed. Multiple versions of the same jar can now be handled through either overrides or a spec...
02/24/2010
- 05:54 PM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- This issue was caused on PutServiceClient.java. Aprivate method on this class called System.exit(1) when it caught an...
- 01:50 PM Bug #4830: Kepler exit when using echoGridWriter actor with the wrong xml path.
- make it available at kepler-dev.
- 12:38 PM Bug #4830 (Resolved): Kepler exit when using echoGridWriter actor with the wrong xml path.
- The message for the execution of the attached workflow.
[run] EcogridUtils: The time to create instance is =... - 01:45 PM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- Fixed the missing director rt. click menu items. this was due to a menu reorg on the ptII side. Still working on th...
- 11:11 AM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- On wrp suite (kepler trunk), I saw the "Get Metadata" menu item after right click an eml actor on an existed workflow...
- 10:26 AM Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- The right click menu works if you rt click on the item in the library. I'll see if I can add this to the right click...
- 01:11 PM Bug #4832: python actor outputting to disconnected composite output throws error
- I take back the part about it affecting the 2.0 branch. I can't keep my windows straight. It is affecting wrp.
- 01:09 PM Bug #4832: python actor outputting to disconnected composite output throws error
- This seems to affect the 2.0 Kepler branch.
- 01:07 PM Bug #4832 (Resolved): python actor outputting to disconnected composite output throws error
- I have a composite actor with an output port. Inside, I have an Expression passing a token to the default python act...
- 12:41 PM Bug #4831 (Resolved): Kepler (trunk) couldn't save a workflow to a remote repository as kar file
- On Kepler(trunk):
1. Open the eml-simple-plot.moml file.
2. Select my host as a saving destination (click source bu... - 10:10 AM Bug #4517: Verify that the search capabilities work
- To close this bug, close bug 4462 and bug 4799
- 10:08 AM Bug #4517: Verify that the search capabilities work
- Except bug 4462 and 4799, the others function seems working
- 10:05 AM Bug #4799: "Login Anonymously" gave an error during the data search
- The error message has gone. However,the GUI showed three times when I kept clicking the "Login Anonymously" button. ...
02/23/2010
- 06:22 PM Bug #4829 (New): User log4j files
- We had a request that users' be able to maintain their own log4j files, e.g. in an environment where many users use t...
- 03:17 PM Bug #4828 (Resolved): Uploading a top-level workflow to the repository fails
- Uploading a top-level workflow attempts to put the whole workflow, complete with doctype tag, into the KAR XML it the...
- 12:58 PM Bug #4010: RExpression2 - tracking for backwards compatibility
- First ... apologies. I just submitted an RExpression bug that you've already fixed in Rexpression2 (column major matr...
- 12:38 PM Bug #4827 (New): RExpression does not handle matrix tokens correctly.
- I've attached a simple workflow that demonstrates a bug in the way the RExpression actor translates Kepler/Ptolemy ma...
- 10:41 AM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- I think this was a problem with left over data from the provenance suite. I cannot replicate this. Closing for now....
- 10:40 AM Bug #4801: out of memory
- I am not able to reproduce this in the kepler suite. I think this is a WRP/Provenance problem. I'm going to retarge...
- 10:36 AM Bug #4826: intermittent exceptions displaying matrix tokens
- I saw this in Ptolemy, so it is a Ptolemy bug, not a Kepler bug. I'll see if I can fix it before the final version of...
- 10:23 AM Bug #4826: intermittent exceptions displaying matrix tokens
- Forgot to specify platform.
- 10:22 AM Bug #4826 (Resolved): intermittent exceptions displaying matrix tokens
- I experience intermittent exceptions displaying matrix tokens in a simple workflow. The problems are more frequent w...
- 10:35 AM Bug #4516: Module Manager needs ability to install modules needed by KARs
- Since 4483 is pushed to 2.x, pushing this one as well. most of the functionality is there, we just need a bit more t...
- 10:34 AM Bug #4685: Create installers
- verify that R can not be installed without not installing the entire R module.
- 10:33 AM Bug #4803: Review the README file
- Need to get a new contributor list.
- 10:24 AM Bug #4799: "Login Anonymously" gave an error during the data search
- this is not fixed for me. After merging the changes from the trunk to the branch, I have to click the "login anonymo...
- 09:46 AM Bug #4578: tracking bug for changes to .kepler
- Since 4785 has been closed, I don't think we're going to make any more changes to .kepler, so I'm closing this tracki...
02/22/2010
- 04:11 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- O.K. neglected to mention that I had cleared the KeplerData > modules > provenance data. Maybe that could have someth...
- 04:05 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- In Kepler. But just downloaded the new build for 2.0 branch, and now cannot replicate it. Will try a few more times...
- 03:59 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- What suite is this happening in? Kepler or WRP or other?
- 03:06 PM Bug #4820: Out of memory Error: Error creating alternateGetMoml!
- How big is the KeplerData folder (specifically, KeplerData/modules/provenance), and if you try this again, do you get...
- 02:45 PM Bug #4820 (Resolved): Out of memory Error: Error creating alternateGetMoml!
- While stepping through the examples in the documentation, I did the following:
1. Clicked on the Data tab and did ... - 03:57 PM Bug #4483: Module dependencies in MoML files
- pushing to post 2.0 release.
- 02:34 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- This only seems to be a problem with KARS that use the ReportLayoutKAREntryHandler.
- 01:54 PM Bug #4261: Long file name on windows
- Just an update on the long-line length problem.
The issue is that certain file systems have limits
and svn makes the ... - 01:44 PM Bug #4799: "Login Anonymously" gave an error during the data search
- This has now been fixed.
02/19/2010
- 05:01 PM Bug #4727: Cannot compile Ptolemy from IntelliJ
- Yeah, I will be working on this. In the meantime, we can just patch the individual IDEs so that they work for everyone.
- 04:59 PM Bug #4727: Cannot compile Ptolemy from IntelliJ
- This bug has cropped up again, this time also affecting Eclipse (and presumably NetBeans as well). The solution, acco...
- 01:08 PM Bug #4815 (New): Need a target to build kepler-styles.jar
- On kepler 1.0.0, there was a target to build kpelr-styles.jar from eml repository. However, it was removed from keple...
- 01:06 PM Bug #4807: GetMetadata does nothing
- In eml module, duplicated parameters were removed on eml-settings.xsl and eml-identifiers.xsl. Use a new target in em...
02/18/2010
- 05:18 PM Bug #4812 (New): local repository KAR [right click]->Delete fails when file does not exist
- Save a KAR to a local repository, then delete the file outside Kepler, then from the components tree right click the ...
- 03:48 PM Bug #4804: copy/paste relation changes width from Auto to 1
- I'm not 100% sure this is the same bug, but if I delete the actors and relation, then undo the change, the relation w...
- 03:48 PM Bug #4798: Create parser for KAR XML specification
- this is a 2.0 bug in that it is blocking the component search bug
- 03:46 PM Bug #4798: Create parser for KAR XML specification
- https://code.kepler-project.org/code/kepler/trunk/modules/core/src/org/kepler/kar/karxml/KARFile.xsd
is what exists ... - 12:51 PM Bug #4798: Create parser for KAR XML specification
- As far as I know, no. That's a good point. I'll leave this open until there's some soft of official schema to check a...
- 12:47 PM Bug #4798: Create parser for KAR XML specification
- is there a complete XSD now?
- 11:04 AM Bug #4798: Create parser for KAR XML specification
- Wrote initial implementation. I'll leave this bug open for a day or two for interested parties (especially those invo...
- 01:42 PM Bug #4811 (In Progress): No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas
- After dragging an EML actor from search result panel to canvas, there was a right-click menu item named "Get Metadata...
- 01:40 PM Bug #4810 (New): [right click]->Save Archive (KAR) on composite actor borks port attributes
- Open the example MOML and save the composite actor as a KAR file. If you extract the MOML from the KAR, you'll see e...
- 01:14 PM Bug #4808: ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- This is fixed. Logging and third-party libraries should generally be kept out of the build. If you need a third-party...
- 12:51 PM Bug #4808: ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- I am working on this bug now. It will be fixed shortly.
- 12:02 PM Bug #4808 (Resolved): ant clean-cache fails, NoClassDefFoundError, org/apache/commons/logging/LogFactory
- Chris first reported this by e-mail, but I'm still seeing it. Aaron, svn says you put these lines in.
java.lang.N... - 12:51 PM Bug #4809: Kepler storing authenticated search results
- I'm not sure the search is being performed on the server. All I know is I'm not being asked to authenticate again.
- 12:45 PM Bug #4809: Kepler storing authenticated search results
- this has long been the case for datasets that have already been downloaded/cached - if you restart Kepler you don't n...
- 12:18 PM Bug #4809 (New): Kepler storing authenticated search results
- From a clean cache, start Kepler and search using authenticated sources. Authenticate and Kepler will return search ...
- 12:02 PM Bug #4807: GetMetadata does nothing
- I can see a error on console:
[run] ERROR: 'jar:file:/home/tao/project/kepler/core/lib/jar/kepler-styles.jar!/style/... - 11:49 AM Bug #4807 (Resolved): GetMetadata does nothing
- Search for any data, right click on a search result, and select the only option, "GetMetadata". This does not seem t...
- 11:44 AM Bug #4805: searching for data gives an NPE
- It turned out that the NPE exception didn't affect the search result. But it still was annoying. We added a checking ...
02/17/2010
- 06:50 PM Bug #4793: Workflow Run Manager - clicking on row when provenance is off gives error
- You also can't delete rows when provenance is off, because getDefaultProvenanceRecorder will return a Recording in th...
- 05:48 PM Bug #4797: Verify that multiple workflow/actor KARs work as expected
- I have created a KAR file that contains all the actors in the actors module. I called it CoreActors.kar and attached...
- 04:11 PM Bug #4806 (New): add output port to Throw Exception
- In some of my workflows, I have an actor that checks that certain components are installed and working before trying ...
- 03:52 PM Bug #4805 (Resolved): searching for data gives an NPE
- I searched for Kruger on both KNB and DEV using both authenticated and unauthenticated searches. I authenticated as ...
- 03:34 PM Bug #4804: copy/paste relation changes width from Auto to 1
- I can replicate this in Ptolemy
1. Right click on the relation and select "Configure". Note that the width is
set ... - 03:26 PM Bug #4804 (Resolved): copy/paste relation changes width from Auto to 1
- Drag 2 actors to the canvas and join them with a relation. Copy the actors and relation and immediately paste it. T...
- 03:19 PM Bug #4801: out of memory
- I suggest using JProfiler to track this down. They have a trial offer. Edward and I have licenses. I don't have th...
- 02:57 PM Bug #4801: out of memory
- After getting the out of memory error, I generated a heap histogram, restarted Kepler, and generated another heap his...
- 02:13 PM Bug #4801 (In Progress): out of memory
- ERROR: RecordingException: Unable to query data table: out of memory
I opened tpc01, ran it, closed it, opened tpc... - 02:50 PM Bug #4803 (Resolved): Review the README file
- Need to review the readme for factual accuracy and new content additions.
- 02:44 PM Bug #4802: KARs in KeplerData/workflows are being parsed on startup
- Ben can you email me the workflow that you're having problems with?
- 02:13 PM Bug #4802 (Resolved): KARs in KeplerData/workflows are being parsed on startup
- When I launch Kepler with a clean cache but with a workflow sitting in my local workflow directory that uses protecte...
- 02:43 PM Bug #4578: tracking bug for changes to .kepler
- I would argue against having a task to clean the persistent directory. It's supposed to be persistent and not have t...
- 02:35 PM Bug #4578: tracking bug for changes to .kepler
- The kar directories that used to be in the cache are now in the KeplerData directory, so they are not deleted/rebuilt...
- 02:27 PM Bug #4578: tracking bug for changes to .kepler
- ant clean-cache deletes .kepler/cache-2.0.0 in r23085
- 02:12 PM Bug #4578: tracking bug for changes to .kepler
- (In reply to comment #11)
> 'ant clean-cache' seems to not be deleting anything at the moment. shouldn't
> it?
Whoop... - 02:06 PM Bug #4578: tracking bug for changes to .kepler
- 'ant clean-cache' seems to not be deleting anything at the moment. shouldn't it?
- 01:55 PM Bug #4792: NPE from Eml200DataSource
- Now giving an actual message for the NPE and throwing it up the chain.
- 01:41 PM Bug #4792: NPE from Eml200DataSource
- i'll take this.
- 12:41 PM Bug #4800 (Resolved): CacheManager can not insert WorkflowRun into cache
- When you export a run, CacheManager's insertObject cannot insert WorkflowRun entries into cache. This is because the ...
- 12:26 PM Bug #4789: multiport input to composite actor seems to only pass first token
- Inside the composite, the relation between the multiport and the RExpression has width 1. I'm not sure how or why it...
- 11:26 AM Bug #4789: multiport input to composite actor seems to only pass first token
- If I listen to the multiport input on the RExpression inside the composite, I see one token on a single channel. If ...
- 10:03 AM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- I finally remembered that I can look directly at the provenance db while Kepler's running. I just deleted all the ru...
02/16/2010
- 04:38 PM Bug #4799 (Resolved): "Login Anonymously" gave an error during the data search
- After running Kepler, I typed the word "Datos" on the Search Data field and clicked search button. An Authentication ...
- 04:32 PM Bug #4798 (Resolved): Create parser for KAR XML specification
- Create a parser for the new KAR XML format, for use especially when it is returned from a metacat query.
- 03:51 PM Bug #4797 (Resolved): Verify that multiple workflow/actor KARs work as expected
- The KAR system was written to allow for storing multiple actors/workflows inside the KAR. This has not been well tes...
- 02:20 PM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- Running kars is not supported except in a server configuration. The reason for this is that the kar is first sent to...
- 02:18 PM Bug #4786: workflow file saved in KAR does not open when extracted
- KeplerMetadataExtractor was using Document.getFirstChild() to get the rootNode when it should have been using Documen...
02/12/2010
- 11:59 PM Bug #4702: KAR to module conversion utility
- Closing this bug because this feature is not needed at this time.
- 03:05 PM Bug #4702: KAR to module conversion utility
- > This is an inappropriate conversation for this forum.
And what is the appropriate forum?
> This issue has already... - 06:01 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- I think it's too big to attach, so I've put it here:
http://www.nceas.ucsb.edu/~soong/kepler/provenance%20HSQLDB%20... - 05:22 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- Could I get a copy of the large db along with a list of steps performed to create it?
- 04:28 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- So I wiped my .kepler and KeplerData, started Kepler (to initialize these folders), and things ran "fast" (1-3 sec pe...
- 04:04 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- Forgot to answer the question. Sort of. I can reproduce the 3000+ function calls, but they seem to resolve faster, ...
- 03:41 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- That's correct and expected. recordContainerContents is initiated from changeExecuted, and it's recordContainerConte...
- 03:26 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- If I run the workflow without accessing the data, and then change the targetYear, I only get 2 or 3 calls to changeEx...
- 08:54 AM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- It's in the Kruger SVN:
https://code.ecoinformatics.org/code/kruger/trunk/workflows/tpc09-plant-dynamics/tpc09-plant... - 08:43 AM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- Could you provide the workflow?
- 05:29 PM Bug #4795: RExpression & cache cleaning
- Zactly.
- 05:20 PM Bug #4795: RExpression & cache cleaning
- Dan H. already had some code in there for managing "too long of strings" for the script input - long numeric arrays c...
- 05:14 PM Bug #4795: RExpression & cache cleaning
- We could do away with the .sav files. Ben, try this in R:
str <- paste("_data.frame_:", rawToChar(serialize(iris, ... - 04:36 PM Bug #4795: RExpression & cache cleaning
- There are a few kinds of files generated by RExpression:
1. complex data transfer from one RExpression actor to anoth... - 04:22 PM Bug #4795: RExpression & cache cleaning
- I've noticed this too, and it seems like a good idea to me.
If the RExpression actor put these files into the proven... - 04:15 PM Bug #4795 (New): RExpression & cache cleaning
- My .kepler cache bloats pretty quickly because of RExpression's temporary files. Can we have RExpression clear it's ...
- 03:23 PM Bug #4792: NPE from Eml200DataSource
- A better error message instead of NPE would be nice.
- 10:42 AM Bug #4792: NPE from Eml200DataSource
- The workflow shouldn't run w/o the data.
What should be happening that isn't currently? Cleaner error? - 10:02 AM Bug #4792 (Resolved): NPE from Eml200DataSource
- 1. open https://code.ecoinformatics.org/code/kruger/trunk/workflows/tpc09-plant-dynamics/tpc09-plant-dynamics-woody.k...
- 03:16 PM Bug #4791: Actor names no longer have spaces
- Sorry a clean-cache should fix this, I think my partially updated version had trouble due to the new cache location...
- 01:12 PM Bug #4791: Actor names no longer have spaces
- Oh and also closing this bug
- 01:11 PM Bug #4791: Actor names no longer have spaces
- Hey guys, yeah looks like the LibIndex was using the name of the Jar entry found in the manifest and not the name tha...
- 12:06 PM Bug #4791: Actor names no longer have spaces
- I looked at this and it looks like the name of the actor is now derived from the name of the kar file. The name of t...
- 01:27 PM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- This is actually two bugs.
Bug 1: Spaces in the paths on a workflow run does not work. I found this to be true an... - 12:25 PM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- The spaces aren't the issue. I can run this with no problem:
java -classpath build-area/lib/ant.jar:kepler.jar org.... - 11:49 AM Bug #4456: Workflow Run Manager in Report Viewer
- This was fixed - the WRM is in the Report Designer view now and reports show when you click on run rows.
If you just ... - 11:45 AM Bug #4793 (Resolved): Workflow Run Manager - clicking on row when provenance is off gives error
- If you disable provenance and then click on a row in the WRM you get an error:
org.kepler.provenance.QueryExceptio... - 11:42 AM Bug #4721: wrm gets exception when provenance turned off
- Fixed in r23066.
However if you click on any row when prov is turned off you get an error. I'll file a bug for that.
02/11/2010
- 09:51 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- The function recordContainerContents is the cause of the slow behavior. It is called from _recordWorkflowContents wh...
- 07:21 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- I've tracked this down to the ProvenanceRecorder listener on the workflow NamedObj. After running tpc09, I change th...
- 12:12 PM Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run
- I profiled Kepler comparing an execution and an execution followed by a parameter change. First, I loaded tpc09 into...
- 07:13 PM Bug #4766: Semantic Annotation Editor doesn't close when you click the close button on mac
- fixed in r23062
- 04:40 PM Bug #4791: Actor names no longer have spaces
- I'm guessing this is related to the changes to the library/database. Aaron do you know?
- 02:48 PM Bug #4791 (Resolved): Actor names no longer have spaces
- At some point the spaces in component names went away. In 1.0 it was e.g. String Constant, but now it's StringConstan...
- 04:33 PM Bug #4458: test for moving kepler directory
- Retargeting to post 2.0.
- 04:32 PM Bug #4577: integrate, and separate from save/export, the code for Uploading
- This bug is a more of request for refactoring and an RFE (when a remote repository is check-marked, don't always prom...
- 02:43 PM Bug #4790 (Resolved): cmd-click in wrp does not create relation
- On a mac, doing a cmd-click in the canvas creates a relation (diamond icon) both in the kepler suite, and kepler 1.0,...
- 02:11 PM Bug #4702: KAR to module conversion utility
- Aaron,
This is an inappropriate conversation for this forum. This issue has already been decided. You have already h... - 12:52 PM Bug #4702: KAR to module conversion utility
- Thanks David, I agree that it is a non-trivial problem. One that we shouldn't have tried to tackle ourselves. Best ...
- 11:17 AM Bug #4702: KAR to module conversion utility
- Aaron,
I don't believe that this is the proper forum for you to air your opinions about the desirability of options ... - 10:53 AM Bug #4702: KAR to module conversion utility
- David, thank you for explaining to us why having a centralized modules.txt that contains prioritized dependencies is ...
- 04:13 AM Bug #4702: KAR to module conversion utility
- I should point out that there is a less ambitious interpretation of this feature request. And that is, not that we ar...
- 04:00 AM Bug #4702: KAR to module conversion utility
- Do any actual kar files from 1.0 actually contain jars? If so, is the number sufficient to justify building a utility...
- 01:59 PM Bug #4785: move cache object from 1.0 to 2.0
- I've been looking at this all morning and I think we should punt on this until after 2.0. We basically need to use t...
- 01:49 PM Bug #4580: Error saving/opening KAR that has a workflow with a PortParameter
- fixed.
- 12:25 PM Bug #4578: tracking bug for changes to .kepler
- changed to always use cache-2.0.0 in r23059.
- 11:01 AM Bug #4789 (Resolved): multiport input to composite actor seems to only pass first token
- See attached workflow. The problem is not likely to sit with RExpression itself, as I can move the RExpression actor...
- 05:22 AM Bug #4281: ant update produces message about running svn cleanup
- Christopher,
I was wondering if you could reproduce this problem still. I just tried to reproduce it using your comm... - 05:07 AM Bug #4328: change-to command checks out across branches
- What is the purpose of the -Dbranch option? All branches should be named differently, so this option should not be ne...
- 04:31 AM Bug #4311: Build system appears to lock if there is a conflict upon update
- This was fixed by Chad in an even better way by taking advantage of command-line options that exist in the svn update...
- 04:27 AM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- This bug does not exist when running ant "run-workflow" against an ordinary workflow which is stored in an XML file. ...
02/10/2010
- 05:34 PM Bug #4784: Remove or fix and re-enable the fullscreen zoom button
- fixed for modules that use tagging in r23056.
- 09:39 AM Bug #4784: Remove or fix and re-enable the fullscreen zoom button
- Lets remove it for 2.0. Assigning to Debi.
- 05:04 PM Bug #4786 (Resolved): workflow file saved in KAR does not open when extracted
- If I save a workflow as a KAR, unjar the KAR, and try to open the workflow xml file, it opens as a text file instead ...
- 03:38 PM Bug #4578: tracking bug for changes to .kepler
- After talking w/ Chad and Matt the plan is to mostly leave things as they are. We just need to add version info to so...
- 03:13 PM Bug #4785 (New): move cache object from 1.0 to 2.0
- Cache kar objects from 1.0 that contain customized actors (i.e. not those shipped with 1.0) need to be migrated to th...
- 03:11 PM Bug #4740: Create Ontology_Catalog sql table in the CORE persistent database
- push to 2.X.Y
- 02:50 PM Bug #4723: workflows directory should be moved
- kar files are now placed into the persistent data directory at
~/KeplerData/modules/<modulename>/kar
You will need t... - 11:03 AM Bug #4723: workflows directory should be moved
- Workflows directory has been moved into the persistent KeplerData directory. I will also move the module kar directo...
- 09:43 AM Bug #4723: workflows directory should be moved
- reassigning to aaron.
- 01:18 PM Bug #4580: Error saving/opening KAR that has a workflow with a PortParameter
- Reassign to Dan, he's looking at this
- 10:46 AM Bug #4702: KAR to module conversion utility
- This bug is for backwards compatibility. Since 2.0 kars do not allow for java classes or jars this utility would all...
- 09:42 AM Bug #4702: KAR to module conversion utility
- What was the reason for needing this again? Do we need this for 2.0?
- 10:12 AM Bug #4662: roll revision vs. new object ID
- At 23040, the revision buttons no longer seem to exist, so I guess these exact symptoms will no longer occur. I'm no...
- 10:02 AM Bug #4710: RExpression fails to convert arrayType(niltype)
- I think we fixed this in 22692.
02/09/2010
- 04:30 PM Bug #4784 (Resolved): Remove or fix and re-enable the fullscreen zoom button
- The full-screen button is still in the toolbar and set to do nothing (http://bugzilla.ecoinformatics.org/show_bug.cgi...
- 04:19 PM Bug #3172: windows mouse wheel doesn't scroll canvas
- Retargeting this bug to 2.X.Y.
Some related scrolling issues were brought up by Peter during yesterday's REAP call:
... - 03:56 PM Bug #4783 (New): Standardize workflow parsing to get parameters
- There are a few different approaches (SciencePipes, CAMERA, UCGrid, Hydrant, etc.) to get workflow parameters from an...
- 03:41 PM Bug #4462: Component search in remote repositories not working
- then there's a sample of this "kar metadata" file that aaron uploaded here:
http://kepler-dev.nceas.ucsb.edu/kepler/m... - 03:36 PM Bug #4462: Component search in remote repositories not working
- if you go on Keper-dev's "dev skin" and search using this squery, you can see the "kar" metadata is returned.
(URL: h... - 03:34 PM Bug #4462: Component search in remote repositories not working
- Need to verify with Aaron, but I believe:
components are now being uploaded using a new XML metadata format (a wrappe... - 03:25 PM Bug #2493: actor repository tracking bug
- adding dependencies...
- 03:04 PM Bug #4781: Use the KarXmlGenerator to create the xml metadata sent to the metacat server during "Upload To Repository" action
- KAR Uploads from Kepler now use the new KarXml format.
- 02:01 PM Bug #4697: Semantic Annotation does not increment LSID revision
- fixed in r23035
- 01:55 PM Bug #4782: configuration files do not load with non en_US locale
- fixed in r23033. Thanks Chad!
- 12:06 PM Bug #4782: configuration files do not load with non en_US locale
- added a method to use a default locale tagged file if the currently set locale is not available.
- 11:00 AM Bug #4782 (Resolved): configuration files do not load with non en_US locale
- If the locale is not set to en_US, the configuration files do not load. I can reproduce this on my mac by:
export ... - 11:11 AM Bug #4373: Copyright Statements are Inconsistent
- added a flag to update the copyrights for tests. all tests are now updated.
- 10:48 AM Bug #4373: Copyright Statements are Inconsistent
- The sources in tests/src/ have old and inconsistent copyrights.
02/08/2010
- 06:00 PM Bug #4781 (Resolved): Use the KarXmlGenerator to create the xml metadata sent to the metacat server during "Upload To Repository" action
- Use the KarXmlGenerator class to create the xml metadata sent to the metacat server during "Upload To Repository" action
- 05:57 PM Bug #4704: Generate XML for a KARFile
- I created one junit test that reads in a test kar file (that I put in the same directory as the Junit test, I guess t...
- 03:51 PM Bug #4773 (New): Data processing on the GPP
- Do we allow data processing on the GPP unit? Could it be a Kepler workflow, e.g., for quick QA?QC.
- 03:49 PM Bug #4762: create gui to control sensor from kepler
- How does an issued command go from Kepler to sensor? A sequence diagram showing all the components would be good to e...
- 03:45 PM Bug #4756: allow saving of sensor workflow output
- This could be separated into two different bugs: (a) for writing to Metacat and
(b) for writing to DataTurbine - 03:44 PM Bug #4756: allow saving of sensor workflow output
- This could be separated into two different bugs: (a) for writing to Metacat and one for writing to DataTurbine
- 03:42 PM Bug #4755: update workflow run manager and reporting to display runs of sensor workflows
- An example report (what comes up when you click on a row for the example site in figure 1) is needed to understand th...
- 03:39 PM Bug #4754: update metacat workflow execution scheduler
- This bug should include the documentation of how to set up the server, how to configure it, etc.
- 03:34 PM Bug #4753: create gui for scheduled execution of sensor workflows on server
- This should have an option to run a workflow continuously.
Another idea is, can we change the frequency of a workflo... - 03:30 PM Bug #4752: create a sensor plots gui
- What other visualization of data can we come up with in addition to plotting?
- 03:28 PM Bug #4751: implement "run" for site layout
- What director will be used to run the layout?
- 03:23 PM Bug #4748: create google earth kml from component coordinates
- Any other mapping interface?
- 03:17 PM Bug #4745: load & save site layout to metacat
- Another way of doing site documentation(Figure 1 in https://kepler-project.org/developers/incubation/kepler-engineeri...
- 03:11 PM Bug #4743: create gui to edit documentation metadata for component
- Do we know if there's missing information? Are there optional fields and how do they effect the design?
- 03:08 PM Bug #4742: create engineering view model type
- As a start:
1. Does an engineering workflow only produce commands to control, etc. the sensors? Using what actor and ... - 03:06 PM Bug #4742: create engineering view model type
- We need a definition and distinctionof what scientific workflow vs. engineer workflow is. This could also be thought ...
- 02:48 PM Bug #4741: create icons for engineering view components
- The icons should show explicit input and output ports for easy linking of different entities.
Figure 1 in https://k...
02/06/2010
- 10:29 AM Bug #4462: Component search in remote repositories not working
- In regard to replicating problematic components on Kepler-dev, I sent this email to Sean:
----
If I was correct about... - 10:28 AM Bug #4462: Component search in remote repositories not working
- if synchronizing the local repositories is still running the moml parser, then that means you'll be prompted for auth...
02/05/2010
- 06:52 PM Bug #4767 (Resolved): error instantiating actor with port types from KAR
- Create an Expression actor, give it an input port of type boolean, save it as a KAR into a local repository, then try...
- 06:51 PM Bug #4697: Semantic Annotation does not increment LSID revision
- works for workflow tagging with Tagging UI in r22915.
Still need to updateRevision for semantically annotating ports. - 06:24 PM Bug #4697: Semantic Annotation does not increment LSID revision
- r22914 updates revision for semantic annotation done via Semantic Type Annotation menu. Need to do this in Tagging mo...
- 06:43 PM Bug #4766 (Resolved): Semantic Annotation Editor doesn't close when you click the close button on mac
- Clicking the red X close button on a mac isn't working.
- 06:34 PM Bug #4765 (Resolved): semantic annotation doesn't appear until you click on workflow
- If you semantically annotate a workflow via Semantic Type Annotation menu, the tag doesn't appear in the tag bar unti...
- 06:19 PM Bug #4764 (New): ProvenanceRecorder.changeExecuted slow after workflow run
- If I run any of the tpc workflows (e.g., tpc09), any subsequent changes to Kepler (say changing workflow parameters) ...
- 03:24 PM Bug #4578: tracking bug for changes to .kepler
- I suggest creating a version specific directory inside .kepler instead of renaming it.
Something like:
.kepler/v/... - 02:53 PM Bug #4578: tracking bug for changes to .kepler
- Yeah the AuthNamespace as Kepler Instance Identifier fell through when we decided to not write anything to the root o...
- 02:29 PM Bug #4578: tracking bug for changes to .kepler
- I'm actually not sure that it doesn't. I'll have to check that out.
- 02:27 PM Bug #4578: tracking bug for changes to .kepler
- I'm ok with that -- I was erroneously thinking the build system deleted all of .kepler with ant clean-cache.(In reply...
- 02:17 PM Bug #4578: tracking bug for changes to .kepler
- the upgrade work I did happens in two parts:
First, if DotKeplerManager (DKM) sees the directory signature of a 1.0 ... - 01:58 PM Bug #4578: tracking bug for changes to .kepler
- We've now got KeplerData with module dirs for persistent data, and .kepler for temporary data.
Chad recently added ... - 12:51 PM Bug #4009: kepler 2.0 must provide everything needed for modules
- All module support that is going to be included in 2.0 is now working. If more module support is desired in the futu...
- 12:50 PM Bug #4373: Copyright Statements are Inconsistent
- All copyrights are now the same, except for files that had non-UC copyrights.
- 12:49 PM Bug #4665: Add unit tests for kar functionality
- I built one junit test for the kar framework. could and should probably build more. The framework is setup now so i...
- 12:20 PM Bug #4686: update copyright statements
- All copyright statements are now updated. There is a build command 'update-copyrights' to do this now.
- 10:57 AM Bug #4763 (New): create gui to access datalogger program
- Provide an interface within engineering view to download, view, upload, and install the program running on the datalo...
- 10:55 AM Bug #4762 (Resolved): create gui to control sensor from kepler
- Allow the user to turn on or off or change the sampling rate of a sensor from the engineering view.
- 10:54 AM Bug #4761 (Resolved): install and configure SPAN software on gumstix
- Install the SPAN software on gumstix computers and configure it to talk to the CR800 datalogger and appropriate sensors.
- 10:53 AM Bug #4760 (Resolved): software to transfer sensor data from SPAN to DT
- Create or use existing software to transfer sensor data from SPAN to dataturbine running on gumstix.
- 10:52 AM Bug #4759 (Resolved): install dataturbine on gumstix
- Install dataturbine and java on gumstix. Create docs describing process.
- 10:50 AM Bug #4758 (New): search for site components in kepler's data tab
- Archive site layouts stored in dataturbine to metacat so that sensor components may be searched from Kepler.
See f... - 10:48 AM Bug #4757 (Resolved): transfer sensor data from dataturbine to metacat
- Periodically archive sensor data on the dataturbine server into metacat. Also verify that archived sensor data can be...
- 10:46 AM Bug #4756 (Resolved): allow saving of sensor workflow output
- Sensor workflows that run on the server can convert raw data into derived data; the derived data should be stored bac...
- 10:44 AM Bug #4755 (Resolved): update workflow run manager and reporting to display runs of sensor workflows
- Show the current and past runs of sensor workflows executed on the server in the workflow run manager. Additionally, ...
- 10:40 AM Bug #4754 (Resolved): update metacat workflow execution scheduler
- Make any changes necessary to the workflow execution scheduler in Metacat to provide the functionality for bug 4753. ...
- 10:39 AM Bug #4753 (Resolved): create gui for scheduled execution of sensor workflows on server
- Provide a GUI to specify workflows to periodically run on a server. Configuration parameters include: the workflow xm...
- 10:37 AM Bug #4752 (Resolved): create a sensor plots gui
- Display recent data collected by sensors. Select sensors to display, possibly group by sensor type, different sensors...
- 10:35 AM Bug #4751 (Resolved): implement "run" for site layout
- Pressing the run button in the engineering view should show the status of the sensors by changing the color of the...
- 10:34 AM Bug #4750 (New): create wiring table gui
- Create a wiring table interface that can describe all the connections between sensors and datalogger(s) at a sensor d...
- 10:32 AM Bug #4749 (New): run google earth within kepler gui
- View KML created by bug 4748 within the Kepler GUI (i.e. run GE embedded within Kepler).
- 10:31 AM Bug #4748 (Resolved): create google earth kml from component coordinates
- Metadata for components such as sensors can include their location lat/lon/alt. Export coordinates from an engineerin...
- 10:30 AM Bug #4747 (New): import & export site layout to SensorML
- Import & export engineering view site to SensorML.
- 10:28 AM Bug #4746 (In Progress): ability to create a Site Layout report
- Save all the information in an engineering view site as single, printable document.
- 10:27 AM Bug #4745 (Resolved): load & save site layout to metacat
- Load and save a site deployment (including wiring, sensor workflows, etc.) to a dataturbine server.
- 10:26 AM Bug #4744 (Resolved): load & save site layout to local kar file
- Load and save a site deployment (including wiring, sensor workflows, etc.) to a KAR file.
- 10:24 AM Bug #4743 (Resolved): create gui to edit documentation metadata for component
- Create an interface that allows the user to document various metadata for components at a site, e.g. lat/lon/alt, typ...
- 10:22 AM Bug #4742 (Resolved): create engineering view model type
- The engineering view is a separate tool from the normal workflow editor. Add the engineering view to File -> New subm...
- 10:18 AM Bug #4741 (New): create icons for engineering view components
- Create icons for engineering view components in Kepler. This includes: sensor, datalogger, dataturbine, etc. Also, ne...
- 09:11 AM Bug #4462: Component search in remote repositories not working
- I think the local repositories might still be running the MOML parser. At the very least, they seem to be downloadin...
- 09:00 AM Bug #4462: Component search in remote repositories not working
- kepler-dev has been wiped clean.
This means we shouldn't be at risk of hosing up the KNB server when issuing searches...
02/04/2010
- 09:15 PM Bug #4740: Create Ontology_Catalog sql table in the CORE persistent database
- I think the work Sean Riddle has done in the tagging module could help with this since he developed a gui to dynamica...
- 08:56 PM Bug #4740 (New): Create Ontology_Catalog sql table in the CORE persistent database
- I ran into our old friend, the "Cannot Find Ontology" error. After much time trying to debug through the OntologyCon...
- 03:54 PM Bug #4731: Documentation Customize on directors and parameters gives ClassCastException
- I've changed KeplerDocApplicationSpecializer to ignore dealing with ports on non-entities. This seems to do the trick.
- 08:59 AM Bug #4731: Documentation Customize on directors and parameters gives ClassCastException
- This problem occurs in Kepler, but not in Vergil.
The stack trace indicates the problem is in KeplerDocApplicationSp... - 12:07 AM Bug #4731: Documentation Customize on directors and parameters gives ClassCastException
- Thanks Derik I'll look into it.
- 02:28 PM Bug #4736 (New): RFE speed up Suggest Similar Components feature
- The Suggest Similar Components feature should be sped up.
E.g. right click on a Display actor and Suggest => Simi... - 02:25 PM Bug #4503: Suggest Similar Components gives an error
- fixed in r22883
this had changed to a ClassCastException when trying to do a "Suggest..." within the wrp suite which... - 01:59 PM Bug #4696: Title bar doesn't refresh after rename during Save Archive
- Closing, have tested and seems to be working well. Let me know if you see anything you consider weird with workflow L...
- 01:07 PM Bug #4666: identify problems with converting .kepler-1.0 to .kepler-2.0
- I have not found any feasible way to transfer the old cache data out of the 1.0 cache into the 2.0 cache. The differ...
- 01:05 PM Bug #4722: find 1.0 -> 2.0 .kepler incompatibilities
- The only incompatibilities I've found are in the cached serialized files. I've dealt with this by having the DotKepl...
- 12:59 PM Bug #3898: update .kepler instead of removing it between versions
- Matt identified these three milestones to be able to close this bug. I believe they are all now met. See my comment...
- 12:49 PM Bug #4161: Develop kepler workflow execution engine
- Need to move the authentication credentials from the old config system (ptolemy-based) to the new configuration.xml s...
- 12:48 PM Bug #4735 (New): Allow params to be passed to ConfigurationManager from the command line
- Need a mechanism for passing params to CM from the command line. This is a post 2.0 feature.
- 12:43 PM Bug #4734: ant run-workflow-no-gui cannot read configuration
- Removed kar entry handlers from the wrp ptolemy config file. actually just removed the whole file since it was total...
- 10:47 AM Bug #4734 (Resolved): ant run-workflow-no-gui cannot read configuration
- Trying to run a workflow (xml or kar) from the ant task or the kepler.sh script results in an exception reading the s...
- 10:39 AM Bug #4730: Kepler cannot run workflows stored in KAR files from the command-line.
- This is not just files with spaces in the path - I'm getting an error as well:
Unsupported file type or connection n...
02/03/2010
- 10:47 PM Bug #4731 (Resolved): Documentation Customize on directors and parameters gives ClassCastException
- If you right click Documentation => Customize on a director or parameter you get a ClassCastException.
- 10:33 PM Bug #4696: Title bar doesn't refresh after rename during Save Archive
- should be fixed in r22873, but needs testing (notably have not yet tested the various user cancel scenarios). Hopeful...
- 04:22 PM Bug #4666: identify problems with converting .kepler-1.0 to .kepler-2.0
- I added code to DotKeplerManager to identify a .kepler version 1.0 directory. If it finds this, it will change the c...
- 04:12 PM Bug #4714: Adding actor documentation does not increment LSID
- Well the solution I came up with is not ideal, but it works. The KeplerDocumentationAttribute now generates one gene...
- 02:02 PM Bug #4714: Adding actor documentation does not increment LSID
- I don't know how to fix this since KeplerDocumentationAttribute is in the ptolemy module.
- 03:44 PM Bug #4730 (Resolved): Kepler cannot run workflows stored in KAR files from the command-line.
- If I run:
C:\kepler\build-area>ant run-workflow -Dworkflow="C:\Users\visitor\Desktop\kruger workflows\tpc01-buffalo... - 12:04 PM Bug #4722: find 1.0 -> 2.0 .kepler incompatibilities
- I went through all of the standard kar files that shipped with 1.0. None of them have jar or class files embedded in...
- 11:48 AM Bug #4595: ViewPane selection does not work with toolbar tear-off
- Fixed in r22857.
- 11:41 AM Bug #4723: workflows directory should be moved
- If it's meant to be changed by the user at runtime, then yes, it should be moved.
02/02/2010
- 05:52 PM Bug #4696: Title bar doesn't refresh after rename during Save Archive
- issue in comment 5 now fixed.
remaining problem: Save As xml rename event sends the old name through, so provenance ... - 05:13 PM Bug #4727: Cannot compile Ptolemy from IntelliJ
- I've fixed the compilation problem for the time being, but it will crop up again when items are added or removed from...
- 04:57 PM Bug #4727 (Resolved): Cannot compile Ptolemy from IntelliJ
- I can't compile the ptolemy module from within IntelliJ because the appropriate exclusions and inclusions for ptolemy...
- 04:42 PM Bug #4322: Attempting to save changes to a workflow saved in a KAR file fails
- User is now queried to save a KAR file instead of xml file.
- 02:49 PM Bug #4723: workflows directory should be moved
- Should this also apply to the module kar directories?
e.g.
<keplerRoot>/provenance/kar
moves to
~/KeplerData/module... - 10:16 AM Bug #4723 (Resolved): workflows directory should be moved
- There is a directory 'workflows' in the kepler installation directory where you can save kars and have them automatic...
- 10:08 AM Bug #4722 (Resolved): find 1.0 -> 2.0 .kepler incompatibilities
- Need to go through the 1.0 .kepler directory and find any kars that have jars/classes and figure out a way to migrate...
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